LOC120568740


Basic Information

Item Value
gene id LOC120568740
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26559608 ~ 26565645 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816421.1
GGCACAGATACCCAATGTGTTGTCCCAGGACTGATGTGTGGCACGGTGTACAATGTCTGGGTCAAGGCCTTGGGATGGCAGTACAACAGCTCTGACAGCACAGTGGTGTCTCTTACATCAGCTCCATGTCTGCCCAGAGAGGTAGAGGCAAAGGTTGACTGTAACTCCGatggtgctgctgttgtgtcCTGGAATGCTACTTATGGCGCAGCAAACTTTTCCCTGACAGCCATTGTCAGTGGAAGTCCTCAGACTCTGTGTGCAACTCAGCAGAACAGATGTAATGTGACAGGTTTAAGTTGTGGGGAAACCTACAACCTCAGCTTCACCGCCAGCAACACACAGTGCAGCCTTACAGCACAGATGCACGCCAACCTCACCACACGTCCTTGTCCACCTCAGCGTGTGGCTGTCGACCTGCAGTGTGGCTCCCACACCGCAGTCTTGTCCTGGGAGGAGAGGTCTGATGTTGAATTCTACGTAGCAAGGGCCATCAAGACATCAGGAGGGGAGGTGAAGACATGTAACTCTACAGGCTCTACCTGTCCGTTTGCCAGCCTGGACTGTGGAGAGACGTACAACTTTACTGTAACAGCACATAGTCAAGGCTGCCGGAGCCAGGCCAGTACCACTGTGTTCATCCAAACAGAGCCGTGTACACCCAGGCAGCTGGTGGTTGACGCCACCTGTGACCAAGGTGCGCTGGTGTCCTGGAGCCCCTCTCCTGGAGCTGAAACCTACCATGTTGTCGCTATGGGTGTAAATGGACAAGTGCATACTTGCAACACCACCTCCAGTAACTGCAGCATATCAGAGCTCCGCTGTGGCCAGAAGTATACAGTGTTTGTGACTGCAAGCCACAAGAACTGCTCCAGCGAGGCCAGTGAAAATGCCACACTCAACACAGGTCCCTGCCAGCCTGATGGCCTCTCGGTTACTTTCCACTGTAAAAATCAGTCAGCACAGCTGTCATGGACGCCCAGAGATAACGCTGTAGACTACTATGGCTGTGCCCAGGCTGGAAATGGACACATGCTGTACTGTCACAGCAGAAATCCCACGTGCACCATCCAAGATCTCGAATGTGGAACGCTTTACAATTTCTCTGTCCGGGCCTCAGATGGGACATGCAACAGCTCCTTTAGTGACCCCGTGCAGAGTGGAGCAGctCCCTGTCCTCCAGACACTGTTAAGGTGAAGCTGATGCCGATGCAGACGGAGATCCAGGTGTTGCGCTTCTCCTGGACAGAGGTCACCTATAGAGACACAGAGTATATCCTGAAGTTAACAGGACGTCTGCTGGGAGACAGCCAGGCCCAGTTTGATCTCTCATCCTATTGGACCAGCACAACATACTTTGAGATTCCTCTCCCCTGCGGTTCAGCCTACTCTGCTACAGTGGAGAGCAGGAAGGCTGCCAGTACCAGCAACCCATCTGTGCCTCTCAATGATACAACAGCTCCTTGTCCACCATCAGGAGTGGCGTACAGTGGTAACAGCTCCCTTGCCACAGTTTCGTGGAACACGTCCATGTTTGCCACCACATTCAGGGTGTACGACAACAGTGTGAAGCCAAAAGCCCAGCTGTGCAGAACTGCAGGGCTGTCCTGCTCTCTGACCAACATCACTTCCACTAACATTGTGATCACAGCTGGCAACACAGCTGGAGAAAGTGAAGCGACAAGGGTGCCGATTGTGGTAACTAATCGCAGGAGGAGAGATCTCAGTGTACAAAGGCCAAAGAATGGAGGCCTCTCAGCTCCCGTGCTGGATGTCAAACAAACAATGTCAACAGTCATTTTGGTTGAGTGGTCTCAAATAGATACTGCTTCCCATTACAGTCTGAAGATCAGGAAGCAAGGCAGCTCCAGTGAGCCTGAGGAGATAACGGTGTACGGCGAGAGCACCATTCTCACTGATCTGAGCCCAAACTCCATCTACTGTATCCGTGTGTCGGCCAGAAACTCGGCCACTAGTGGACCGGAGtcagagcctgtgtgtgtgcaaatagGAGAGGACCTTCCCCAATAGGAAAACACTTGCATAGAGGTCTGCACATGTCTCCTGATTAAAATGTGGTGGTCTTACTGTAAAAGTGGCAGCTCTTTTGACATTTAAGAATGACAGATCATTTCCCAGTTAGCTGGTAGAACATACTGTAGAGAAAACCATGCTAATTCCTGatatttacatttctgttgGCTTACCATAAACTGCACaagtatttgtttgttttattgttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816421.1 True 2244 mRNA 0.51 9 26559608 26565645

Neighbor

gene id symbol gene type direction distance location
LOC120567673 NA coding upstream 6527 26534496 ~ 26553081 (+)
fndc7a NA coding upstream 23909 26524945 ~ 26535699 (+)
LOC120569037 NA coding upstream 38505 26508928 ~ 26521103 (+)
camsap2b LOC102288635,LOC100701512,LOC103357628 coding upstream 80179 26440735 ~ 26479429 (+)
ticam1 NA coding upstream 120158 26435750 ~ 26439450 (+)
LOC120568699 slc25a24,LOC104964315,LOC103357622 coding downstream 14958 26580603 ~ 26588571 (+)
zgc:85843 tm6sf2,LOC104924838,LOC102294137,LOC102201647 coding downstream 100859 26666504 ~ 26672258 (+)
LOC120569005 LOC106935698,LOC103153539 coding downstream 226557 26792202 ~ 26813425 (+)
ndufa13 ndufa13,LOC102786334 coding downstream 250039 26815684 ~ 26819017 (+)
LOC120567603 LOC103357602,LOC108239446,LOC104948981,LOC105934574 coding downstream 325290 26890935 ~ 26899765 (+)
G118009 NA non-coding upstream 244978 26314265 ~ 26314630 (+)
G117938 NA non-coding upstream 350737 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 354778 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 493769 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 642886 25916500 ~ 25916722 (+)
G118115 NA non-coding downstream 37011 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 96637 26662282 ~ 26664844 (+)
LOC120569009 NA non-coding downstream 178096 26743741 ~ 26763260 (+)
LOC120569008 NA non-coding downstream 215722 26781367 ~ 26784859 (+)
G118164 NA non-coding downstream 255598 26821243 ~ 26824078 (+)
wdr47a wdr47,LOC102290984 other upstream 62799 26421454 ~ 26496809 (+)
ccl20a.3 NA other upstream 141600 26416508 ~ 26418008 (+)
G118011 eif4e2 other upstream 157530 26395426 ~ 26402078 (+)
ece2a ece2,LOC103356888 other upstream 250061 26217998 ~ 26309547 (+)
LOC120568800 NA other upstream 342567 26214432 ~ 26217041 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other downstream 25137 26590782 ~ 26600072 (+)
G118149 NA other downstream 199847 26765492 ~ 26769911 (+)
LOC120567599 LOC101062208 other downstream 273533 26839178 ~ 26857394 (+)
LOC120568791 LOC103357601 other downstream 312910 26878555 ~ 26938882 (+)
G118234 sugp1 other downstream 317914 26883559 ~ 26886030 (+)

Expression


Co-expression Network