atp6v1h (atp6v1h)


Basic Information

Item Value
gene id atp6v1h
gene name atp6v1h
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19542850 ~ 19573287 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816452.1
GGTCAACTGCGTCATGTGACTGTCATATGATAGATCGTGACGCCGTGTTGTAGTCAGTCAGCTGTGTTAGCTAGCACAGGACAGTAACCGGGTGGAGCAGGATTTTTATTCATACATATACTGTGGTGGATATATTATCACAGGATGGATATCCGCGGGGCAGTGGACGCTGCAGTCCCCACCAACATCATTGCTGCAAAGGCAGCTGAGGTGCGGGCCAATCTGGTCAACTGGCAGTCCTACCTGCAGAGTCAGATGATCTCCGTAGAGGACTGTGAATTCATCAAGAAATTTGAGGTGGCCAACTCTGAGGAGAAACAGGTCATTCTGACCAATGAAGGACATCAGTGTGCAAAGACCTTTCTGAACCTGATGGCACACATCTCCAAGGAGCAGACAGTCCAGTACATCCTGACTCTGATTGATGACACTCTGCAGGAGAACCATCAGCGGGTCAACATCTTCTTTGACTATgccaaaaagacaaagaacacCGCCTGGTCCTACTTCCTTCCCATGCTGAACCGTCAGGACCTTTTTACTGTCCACATGGCGGCGAGGATCATCGCTAAGCTGGCTGCCTGGGGCCGTGATCTGATGGAGGGAAGTGATCTGAACTACTACTTCAACTGGATCAAAAGCCAACTCAGTTCACAGAACCTACATGGTACAGGTCCAGAAACAGGCTCAGGAGCAGGAACTATTTCCCCCAGTGAAAGCTCTCAGTACGTCCAGTGTGTGGCTGGGTGCCTGCAGCTGATGCTGAGGGTGAATGAGTATAGGTTTGCCTGGGTGGAGGCTGATGGAGTCAACTGCATCACAGCAGTGCTGAGCAACAAGTGTGGCTTCCAGCTCCAGTACCAGATGATCTTCTGTGTTTGGCTCCTGGCCTTCAGTCCTCAGCTCTGTGAGCAGTTGAGACGCTACAACGTAGTGCCAGCCCTGTCGGACATCCTTCAGGAGTCTGTCAAGGAGAAGGTCACTCGAATCATTCTGGCTGCCTTCAGGAATCTTCTGGAGAAGTCAGCAGAGAAGGAGACTCGTCAGGAGTACGCCCTGGCCATGATTCAGTGCAAGGTGCTAAAGCAACTCGAGAACCTCGAGCAGCAGAAATATGACGACGAGGACATCACCGAGGACATTAAATTCCTGCTGGAGATGCTGGGAGAGAGCGTACAGGATCTCAGCTCATTTGATGAGTACAGCTCTGAACTTAAGTCTGGCCGCCTGGAATGGAGTCCTGTGCACAAGTCTGAGAAGTTCTGGCGTGAGAACGCCGTCCGCCTGAACGAAAAGAACTACGAGCTCCTCAAGATCTTGACAAGGCTTTTGGAAGTGTCTGATGATCCTCAAGTCATAGCAGTGGCAGCTCACGACATCGGAGAGTATGTGCGGCATTACCCACGTGGCAAACGGGTGATTGAGCAGCTGGGTGGAAAACAGCTGGTGATGAATCATATGCACCACGAGGACCAGCTCGTCCGTTACAACGCCCTGTTGGCTGTGCAGAAGCTCATGGTCCACAACTGGGAGTATCTGGGAAGACAACTCCAGTCCACTGATCAGCAGCAACCTCCTGTCGTGGCAGCCCGAAGCTGAAGTGTTCCTGTGCACGTGCGTTTGTGTATTACTTTGTGGAtgagtgtgtactgtatgtacattgTTCTTTGCCATTTTAATAATGGCTTGTTCATTTTGTGTAATGACTTGAAAATCAAAAGGTGTGGTTTCCTCCTTCAATCTGCACCCTCGGTGATCCTCGATGTTTCTTGATTTGACCGTCGTGCTTCGTGTCGTGCCCTCTCTGCCAAGTGATGTGTGGTGATTGAAGTCACACTTTGTCTGTGATAATGTACAAAAACTGCAACTTATTTAAGTCTTATGTGTAAAACATTGTATGTATCCCAATAAAGATGCTTATCTATGGTGTTA
>XM_039816454.1
AACGCAAATTTGCCTGCTGCTAAACTAACTGCTCTCATTAGTTCAGCTGCTGGGCTTTTTGTTAGATAGCTTGTTAACTAACGTCAGAATTAGTAGTAGtacatgaaatgtaatGTGGAGCAGGATTTTTATTCATACATATACTGTGGTGGATATATTATCACAGGATGGATATCCGCGGGGCAGTGGACGCTGCAGTCCCCACCAACATCATTGCTGCAAAGGCAGCTGAGGTGCGGGCCAATCTGGTCAACTGGCAGTCCTACCTGCAGAGTCAGATGATCTCCGTAGAGGACTGTGAATTCATCAAGAAATTTGAGGTGGCCAACTCTGAGGAGAAACAGGTCATTCTGACCAATGAAGGACATCAGTGTGCAAAGACCTTTCTGAACCTGATGGCACACATCTCCAAGGAGCAGACAGTCCAGTACATCCTGACTCTGATTGATGACACTCTGCAGGAGAACCATCAGCGGGTCAACATCTTCTTTGACTATgccaaaaagacaaagaacacCGCCTGGTCCTACTTCCTTCCCATGCTGAACCGTCAGGACCTTTTTACTGTCCACATGGCGGCGAGGATCATCGCTAAGCTGGCTGCCTGGGGCCGTGATCTGATGGAGGGAAGTGATCTGAACTACTACTTCAACTGGATCAAAAGCCAACTCAGTTCACAGAACCTACATGGTACAGGTCCAGAAACAGGCTCAGGAGCAGGAACTATTTCCCCCAGTGAAAGCTCTCAGTACGTCCAGTGTGTGGCTGGGTGCCTGCAGCTGATGCTGAGGGTGAATGAGTATAGGTTTGCCTGGGTGGAGGCTGATGGAGTCAACTGCATCACAGCAGTGCTGAGCAACAAGTGTGGCTTCCAGCTCCAGTACCAGATGATCTTCTGTGTTTGGCTCCTGGCCTTCAGTCCTCAGCTCTGTGAGCAGTTGAGACGCTACAACGTAGTGCCAGCCCTGTCGGACATCCTTCAGGAGTCTGTCAAGGAGAAGGTCACTCGAATCATTCTGGCTGCCTTCAGGAATCTTCTGGAGAAGTCAGCAGAGAAGGAGACTCGTCAGGAGTACGCCCTGGCCATGATTCAGTGCAAGGTGCTAAAGCAACTCGAGAACCTCGAGCAGCAGAAATATGACGACGAGGACATCACCGAGGACATTAAATTCCTGCTGGAGATGCTGGGAGAGAGCGTACAGGATCTCAGCTCATTTGATGAGTACAGCTCTGAACTTAAGTCTGGCCGCCTGGAATGGAGTCCTGTGCACAAGTCTGAGAAGTTCTGGCGTGAGAACGCCGTCCGCCTGAACGAAAAGAACTACGAGCTCCTCAAGATCTTGACAAGGCTTTTGGAAGTGTCTGATGATCCTCAAGTCATAGCAGTGGCAGCTCACGACATCGGAGAGTATGTGCGGCATTACCCACGTGGCAAACGGGTGATTGAGCAGCTGGGTGGAAAACAGCTGGTGATGAATCATATGCACCACGAGGACCAGCTCGTCCGTTACAACGCCCTGTTGGCTGTGCAGAAGCTCATGGTCCACAACTGGGAGTATCTGGGAAGACAACTCCAGTCCACTGATCAGCAGCAACCTCCTGTCGTGGCAGCCCGAAGCTGAAGTGTTCCTGTGCACGTGCGTTTGTGTATTACTTTGTGGAtgagtgtgtactgtatgtacattgTTCTTTGCCATTTTAATAATGGCTTGTTCATTTTGTGTAATGACTTGAAAATCAAAAGGTGTGGTTTCCTCCTTCAATCTGCACCCTCGGTGATCCTCGATGTTTCTTGATTTGACCGTCGTGCTTCGTGTCGTGCCCTCTCTGCCAAGTGATGTGTGGTGATTGAAGTCACACTTTGTCTGTGATAATGTACAAAAACTGCAACTTATTTAAGTCTTATGTGTAAAACATTGTATGTATCCCAATAAAGATGCTTATCTATGGTGTTA
>XM_039816455.1
TGTGACTGTCATATGATAGATCGTGACGCCGTGTTGTAGTCAGTCAGCTGTGTTAGCTAGCACAGGACAGTAACCGGGATGGATATCCGCGGGGCAGTGGACGCTGCAGTCCCCACCAACATCATTGCTGCAAAGGCAGCTGAGGTGCGGGCCAATCTGGTCAACTGGCAGTCCTACCTGCAGAGTCAGATGATCTCCGTAGAGGACTGTGAATTCATCAAGAAATTTGAGGTGGCCAACTCTGAGGAGAAACAGGTCATTCTGACCAATGAAGGACATCAGTGTGCAAAGACCTTTCTGAACCTGATGGCACACATCTCCAAGGAGCAGACAGTCCAGTACATCCTGACTCTGATTGATGACACTCTGCAGGAGAACCATCAGCGGGTCAACATCTTCTTTGACTATgccaaaaagacaaagaacacCGCCTGGTCCTACTTCCTTCCCATGCTGAACCGTCAGGACCTTTTTACTGTCCACATGGCGGCGAGGATCATCGCTAAGCTGGCTGCCTGGGGCCGTGATCTGATGGAGGGAAGTGATCTGAACTACTACTTCAACTGGATCAAAAGCCAACTCAGTTCACAGAACCTACATGGTACAGGTCCAGAAACAGGCTCAGGAGCAGGAACTATTTCCCCCAGTGAAAGCTCTCAGTACGTCCAGTGTGTGGCTGGGTGCCTGCAGCTGATGCTGAGGGTGAATGAGTATAGGTTTGCCTGGGTGGAGGCTGATGGAGTCAACTGCATCACAGCAGTGCTGAGCAACAAGTGTGGCTTCCAGCTCCAGTACCAGATGATCTTCTGTGTTTGGCTCCTGGCCTTCAGTCCTCAGCTCTGTGAGCAGTTGAGACGCTACAACGTAGTGCCAGCCCTGTCGGACATCCTTCAGGAGTCTGTCAAGGAGAAGGTCACTCGAATCATTCTGGCTGCCTTCAGGAATCTTCTGGAGAAGTCAGCAGAGAAGGAGACTCGTCAGGAGTACGCCCTGGCCATGATTCAGTGCAAGGTGCTAAAGCAACTCGAGAACCTCGAGCAGCAGAAATATGACGACGAGGACATCACCGAGGACATTAAATTCCTGCTGGAGATGCTGGGAGAGAGCGTACAGGATCTCAGCTCATTTGATGAGTACAGCTCTGAACTTAAGTCTGGCCGCCTGGAATGGAGTCCTGTGCACAAGTCTGAGAAGTTCTGGCGTGAGAACGCCGTCCGCCTGAACGAAAAGAACTACGAGCTCCTCAAGATCTTGACAAGGCTTTTGGAAGTGTCTGATGATCCTCAAGTCATAGCAGTGGCAGCTCACGACATCGGAGAGTATGTGCGGCATTACCCACGTGGCAAACGGGTGATTGAGCAGCTGGGTGGAAAACAGCTGGTGATGAATCATATGCACCACGAGGACCAGCTCGTCCGTTACAACGCCCTGTTGGCTGTGCAGAAGCTCATGGTCCACAACTGGGAGTATCTGGGAAGACAACTCCAGTCCACTGATCAGCAGCAACCTCCTGTCGTGGCAGCCCGAAGCTGAAGTGTTCCTGTGCACGTGCGTTTGTGTATTACTTTGTGGAtgagtgtgtactgtatgtacattgTTCTTTGCCATTTTAATAATGGCTTGTTCATTTTGTGTAATGACTTGAAAATCAAAAGGTGTGGTTTCCTCCTTCAATCTGCACCCTCGGTGATCCTCGATGTTTCTTGATTTGACCGTCGTGCTTCGTGTCGTGCCCTCTCTGCCAAGTGATGTGTGGTGATTGAAGTCACACTTTGTCTGTGATAATGTACAAAAACTGCAACTTATTTAAGTCTTATGTGTAAAACATTGTATGTATCCCAATAAAGATGCTTATCTATGGTGTTA
>XM_039816456.1
GATGGATATCCGCGGGGCAGTGGACGCTGCAGTCCCCACCAACATCATTGCTGCAAAGGCAGCTGAGGTGCGGGCCAATCTGGTCAACTGGCAGTCCTACCTGCAGAGTCAGATGATCTCCGTAGAGGACTGTGAATTCATCAAGAAATTTGAGGTGGCCAACTCTGAGGAGAAACAGGTCATTCTGACCAATGAAGGACATCAGTGTGCAAAGACCTTTCTGAACCTGATGGCACACATCTCCAAGGAGCAGACAGTCCAGTACATCCTGACTCTGATTGATGACACTCTGCAGGAGAACCATCAGCGGGTCAACATCTTCTTTGACTATgccaaaaagacaaagaacacCGCCTGGTCCTACTTCCTTCCCATGCTGAACCGTCAGGACCTTTTTACTGTCCACATGGCGGCGAGGATCATCGCTAAGCTGGCTGCCTGGGGCCGTGATCTGATGGAGGGAAGTGATCTGAACTACTACTTCAACTGGATCAAAAGCCAACTCAGTTCACAGAGCTCTCAGTACGTCCAGTGTGTGGCTGGGTGCCTGCAGCTGATGCTGAGGGTGAATGAGTATAGGTTTGCCTGGGTGGAGGCTGATGGAGTCAACTGCATCACAGCAGTGCTGAGCAACAAGTGTGGCTTCCAGCTCCAGTACCAGATGATCTTCTGTGTTTGGCTCCTGGCCTTCAGTCCTCAGCTCTGTGAGCAGTTGAGACGCTACAACGTAGTGCCAGCCCTGTCGGACATCCTTCAGGAGTCTGTCAAGGAGAAGGTCACTCGAATCATTCTGGCTGCCTTCAGGAATCTTCTGGAGAAGTCAGCAGAGAAGGAGACTCGTCAGGAGTACGCCCTGGCCATGATTCAGTGCAAGGTGCTAAAGCAACTCGAGAACCTCGAGCAGCAGAAATATGACGACGAGGACATCACCGAGGACATTAAATTCCTGCTGGAGATGCTGGGAGAGAGCGTACAGGATCTCAGCTCATTTGATGAGTACAGCTCTGAACTTAAGTCTGGCCGCCTGGAATGGAGTCCTGTGCACAAGTCTGAGAAGTTCTGGCGTGAGAACGCCGTCCGCCTGAACGAAAAGAACTACGAGCTCCTCAAGATCTTGACAAGGCTTTTGGAAGTGTCTGATGATCCTCAAGTCATAGCAGTGGCAGCTCACGACATCGGAGAGTATGTGCGGCATTACCCACGTGGCAAACGGGTGATTGAGCAGCTGGGTGGAAAACAGCTGGTGATGAATCATATGCACCACGAGGACCAGCTCGTCCGTTACAACGCCCTGTTGGCTGTGCAGAAGCTCATGGTCCACAACTGGGAGTATCTGGGAAGACAACTCCAGTCCACTGATCAGCAGCAACCTCCTGTCGTGGCAGCCCGAAGCTGAAGTGTTCCTGTGCACGTGCGTTTGTGTATTACTTTGTGGAtgagtgtgtactgtatgtacattgTTCTTTGCCATTTTAATAATGGCTTGTTCATTTTGTGTAATGACTTGAAAATCAAAAGGTGTGGTTTCCTCCTTCAATCTGCACCCTCGGTGATCCTCGATGTTTCTTGATTTGACCGTCGTGCTTCGTGTCGTGCCCTCTCTGCCAAGTGATGTGTGGTGATTGAAGTCACACTTTGTCTGTGATAATGTACAAAAACTGCAACTTATTTAAGTCTTATGTGTAAAACATTGTATGTATCCCAATAAAGATGCTTATCTATGGTGTTA

Function

symbol description
atp6v1h Predicted to enable proton-transporting ATPase activity, rotational mechanism. Involved in eye pigmentation and positive regulation of neural retina development. Acts upstream of or within animal organ development and pigmentation. Predicted to be part of vacuolar proton-transporting V-type ATPase, V1 domain. Is expressed in several structures, including digestive system; gonad; integument; nervous system; and trigeminal placode. Used to study osteoporosis. Orthologous to human ATP6V1H (ATPase H+ transporting V1 subunit H).

NR:

description
V-type proton ATPase subunit H-like

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0060041 retina development in camera-type eye biological_process
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain cellular_component
GO:0046961 proton-transporting ATPase activity, rotational mechanism molecular_function

KEGG:

id description
K02144 ATPeV1H; V-type H+-transporting ATPase subunit H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816452.1 False 1932 mRNA 0.50 14 19542850 19573287
XM_039816454.1 True 1955 mRNA 0.49 14 19542850 19572640
XM_039816455.1 False 1866 mRNA 0.50 14 19542850 19573273
XM_039816456.1 False 1729 mRNA 0.50 12 19542850 19572020

Neighbor

gene id symbol gene type direction distance location
oprk1 LOC104917759,LOC105937811,LOC103479830,LOC108232774 coding downstream 10620 19528163 ~ 19532230 (-)
chmp5a chmp5,LOC103361429,LOC101475708 coding downstream 18368 19519536 ~ 19524482 (-)
bag1 bag1,LOC102796959 coding downstream 26276 19513543 ~ 19516574 (-)
myom1a LOC103361565 coding downstream 33284 19486691 ~ 19509566 (-)
lpin2 LOC103361566 coding downstream 56894 19465952 ~ 19485956 (-)
tcea1 tcea1 coding upstream 20180 19593467 ~ 19601472 (-)
LOC120567744 NA coding upstream 216338 19789625 ~ 19791903 (-)
LOC120567779 LOC101467836,LOC102791796,LOC104956506 coding upstream 309615 19882902 ~ 19916863 (-)
LOC120567774 LOC104956512 coding upstream 373953 19947240 ~ 19956332 (-)
ftr67 LOC104956513 coding upstream 383493 19956780 ~ 19962763 (-)
G116091 NA non-coding downstream 132574 19410049 ~ 19410276 (-)
G116082 NA non-coding downstream 318770 19223828 ~ 19224080 (-)
G116085 NA non-coding downstream 319361 19223263 ~ 19223489 (-)
G116080 NA non-coding downstream 321207 19220715 ~ 19221643 (-)
G116050 NA non-coding downstream 374320 19166515 ~ 19168530 (-)
G116182 NA non-coding upstream 33378 19606665 ~ 19617420 (-)
LOC120568771 NA non-coding upstream 58210 19631497 ~ 19632872 (-)
G116180 vim,LOC107098299 non-coding upstream 66239 19639526 ~ 19640657 (-)
G116181 NA non-coding upstream 72035 19645322 ~ 19648123 (-)
G116268 NA non-coding upstream 105902 19679189 ~ 19679430 (-)
G116138 NA other downstream 77470 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 320124 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 607359 18931974 ~ 18935491 (-)
G115941 NA other downstream 696573 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 822263 18703064 ~ 18720587 (-)
xcr1b.1 NA other upstream 220055 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1411514 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1434761 21008048 ~ 21010576 (-)
G116969 NA other upstream 2688711 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 3772431 23345718 ~ 23361580 (-)

Expression


Co-expression Network