oprk1 (LOC104917759,LOC105937811,LOC103479830,LOC108232774)


Basic Information

Item Value
gene id oprk1
gene name LOC104917759,LOC105937811,LOC103479830,LOC108232774
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19528163 ~ 19532230 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816458.1
CCGGATTTTAATCTATGGCTGAGTAAAAACTCCTAAGCAgtgttgttgtatttgtatGAACTTTTCGGAAGCAGAAAAACAAGcaGTAATCGAAAATTCAGCTTGTTTTGGATCAATATCTAAATTGTGCGGTCAGCTTAcgcccagcagcagcagcagcagcccggCCGGTGCAGGCAGCGTTCAGCACCATGGAGAGCAGCGTGGTGCACATCTACAAAGACGACAGGTGTCCCTCGGGCCAGCCGGAGGAGTGTTTCCCAAACTTCACGTGGCAACCCGGCTCATCAGACATCTTCAACTACACACCCAACGGCACTTGGGACGCTGAACCCGAGCCCATGTCGCCCATCATCCCCATAATAGTCGCAGTGTACTCCGTGGTGTTTGTGGTTGGCTTGGCGGGCAATTGTTTGGTGATGTATGTCATCATTAGATacaccaaaatgaaaacagcCACCAACATCTACATTTTCAACCTGGCTGTGGCCGACGCTCTGGTCACCACCACCATGCCCTTCCAGAGCACCGACTATCTGCTCAGCTCCTGGCCGTTTGGCGAGGTGGCGTGCAAAGTCTTCATCTCCATCGATTACTACAACATGTTCACCAGCATCTTCACCTTGACCATGATGAGCGTGGACCGCTATGTGGCCGTGTGCCACCCTGTCAAGGCCCTGGATTTCCGCACCCCCGTCAAGGCCAAGATCATCAATGTGATCATCTGGGTGCTGTCGTCTGCTGCTGGGATCCCTGCCATGATACTTGGCAGCACAAAGACCAAAAATGGGATTACAGAGTGTGCCTTACAGTTCCCTGAGCCCTACAGCTACTGGGACACCCTGATGAAGATCTGTGTCTTCATCTTTGCCTTTGTGGTACccgtcatcatcatcaccgtCTGCTACACGCTGATGGTCATGCGGCTGAAAAGCGTGCGCCTACTGTCAGGCACACGTGAGAAGGACCGCAACCTGCGCCGGATCACCCGTTTGGTTCTGGTGGTGGTTGCCGTCTTTGTGGTGTGCTGGACTCCCATCCACATCTTCATCTTAGTCAAGGCTCTGTCTGGCAACGTCCCAGAGACCACCGCCGTCATGGCTGCCTACTTCTTCTGCGTGGCGCTGGGCTACACCAACAGCAGCCTCAACCCCATCCTCTACGCCTTCCTGGATGAGAACTTCAAGAGGTGCTTCAGGGACTTTTGCTGCCCAGGCGCCCAAAGACACGGAGACCCTCATGGGGTGAGCCGAGTGAGGAGCACCCTGCGGGACCACACATGTCCCACAGAAGCCCGGGGAGATATGAGGCAGGCCCAGCCTGTATGACTAGCCATGGACACATCCTTTATGCCCTATCAGGGCTGGGAGGACTCCAATGACCTAGGATTGACTCAAGTCACCACTGCCATCTAAGGGAAGGCTATAGAGGGCCAGGTATTTATTTATCCAGCATGTTGGTCAGAGAATCCAAAAGCAGATTCACttacatttttcttattgtcaacaaatccgaTGAAAAGACAAAAGCCATCCCAGAATTGATCCTACTAACCAGTAAGCTATTGCCTGTGTAGCCAAAAGCTAATATAGGTTATTCCTTCATTGTTGTCAAAAAACTATTGGcatgacatgttccttcattgtGATTAACATGGCACTTCTTCACATTCTGAATTAATCCCAGCGTCATCCTGCTGCCAGAAATACTCACTCGACGACCAAATATGTATCAATCTACCGCTGACAATAGTCCTCAACAAATACACAATTTACTGTTGTTagagactttttttcaaaaatgcacAGTACCCAGCTGTCTGATAATGacttcaaataaaataaaaaagaagctatatatatctata

Function

NR:

description
PREDICTED: delta-type opioid receptor-like isoform X1

GO:

id name namespace
GO:0038003 opioid receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0042277 peptide binding molecular_function
GO:0004985 opioid receptor activity molecular_function

KEGG:

id description
K04214 OPRK1; kappa-type opioid receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816458.1 True 1867 mRNA 0.50 4 19528163 19532230

Neighbor

gene id symbol gene type direction distance location
chmp5a chmp5,LOC103361429,LOC101475708 coding downstream 3681 19519536 ~ 19524482 (-)
bag1 bag1,LOC102796959 coding downstream 11589 19513543 ~ 19516574 (-)
myom1a LOC103361565 coding downstream 18597 19486691 ~ 19509566 (-)
lpin2 LOC103361566 coding downstream 42207 19465952 ~ 19485956 (-)
yes1 LOC104926159,LOC103361570,LOC101479012 coding downstream 272628 19226837 ~ 19255535 (-)
atp6v1h atp6v1h coding upstream 10620 19542850 ~ 19573287 (-)
tcea1 tcea1 coding upstream 61237 19593467 ~ 19601472 (-)
LOC120567744 NA coding upstream 257395 19789625 ~ 19791903 (-)
LOC120567779 LOC101467836,LOC102791796,LOC104956506 coding upstream 350672 19882902 ~ 19916863 (-)
LOC120567774 LOC104956512 coding upstream 415010 19947240 ~ 19956332 (-)
G116091 NA non-coding downstream 117887 19410049 ~ 19410276 (-)
G116082 NA non-coding downstream 304083 19223828 ~ 19224080 (-)
G116085 NA non-coding downstream 304674 19223263 ~ 19223489 (-)
G116080 NA non-coding downstream 306520 19220715 ~ 19221643 (-)
G116050 NA non-coding downstream 359633 19166515 ~ 19168530 (-)
G116182 NA non-coding upstream 74435 19606665 ~ 19617420 (-)
LOC120568771 NA non-coding upstream 99267 19631497 ~ 19632872 (-)
G116180 vim,LOC107098299 non-coding upstream 107296 19639526 ~ 19640657 (-)
G116181 NA non-coding upstream 113092 19645322 ~ 19648123 (-)
G116268 NA non-coding upstream 146959 19679189 ~ 19679430 (-)
G116138 NA other downstream 62783 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 305437 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 592672 18931974 ~ 18935491 (-)
G115941 NA other downstream 681886 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 807576 18703064 ~ 18720587 (-)
xcr1b.1 NA other upstream 261112 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1452571 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1475818 21008048 ~ 21010576 (-)
G116969 NA other upstream 2729768 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 3813488 23345718 ~ 23361580 (-)

Expression


Co-expression Network