si:dkey-32m20.1


Basic Information

Item Value
gene id si:dkey-32m20.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19160906 ~ 19166143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816459.1
aacctgtttcacagcctaaatataaaaaaaactctgcttTTGTGGGGAATTCTTAGTCTCAAAGTCTGCAAAACTGTCAAATTCTGCACAGCAGTGTTGCATAATTCCAGTATGAAAAACTGTTTCCTGATTtcgtttttttgtgtggtgCACAACTAGTTGGGCCAAAATTTtctgtgaacctaaattgaaatgcgggccgaatcaaaatttgcaaggggccggatttggcccccgggcctcgagtttgacacgtgattctaaaataacatttgtTAAAACAGACATGGGTCTCAATGTAATCAAGAACTTGTGAACATTTCAGCAGTCGGCGGAGTGTAATTTTGTCCTTGAAATTATGGGATGGGAgtgctctttttttattttttttttgtgagccCATAAAAAGGTGAGCATGACCACCTCATTACCTCAGCAATAAAAGAATACAGCCTCAGTGCAGTGTAAGCAATGTCAGTGTGCAGAGTCCAACGGTTCGACCGGCTCATTTTGTGGGAGATGATTGTCAAAGTCTTTCCTTCCAAGTTCAGACCAGCAACTGGTTTTCAGGGACCATGCCCTCGGGGAAGACGGTTAAGCTCGTCCTGTATGAGGTTCTGCAGCTTGCAGCACTTATCGTACCCATCTTTGTGATTATGGAGCGGTTTGCCAGCCTCATACACGATGTGAGAGGACGGGATCTAACAGCCTACTGGCTGGTGGTGGCAGCCTCTATTGCCTATGTGACCTCTGTGACCCTGCTGGTGTGGGTTCCTCTGAAATATCTCATTCTGAAGCGGCAGAGGTTTATCTCAGAGATCACACAGTGGAGACCAACAGCACTAGCGTATCTCATCCTGTGTACATTACCGTGCTTTGCTATTTTAATAGCCAGCTCCAAGgtgCAGGTGGACAGAGGACACCGAATTGACCATTTCATTGAGTTGCCTGTTTCCTTGGTACTTTTTTCCCTCATCTGTGTGGATGTCATAGAGAGGATTCGCCCCTGCAGGCTCGTCGGACAATCAGGCAGCCTGGATTCTGACTTTGACATGCCAGGCCCCGTCCTCACCTACCTGGAACAGGTGACCACCGTAACAGGCCAGCTGCATCCTGATGAAGGCCAGAATGGTTCGACCCAGGGCCACCCAGAGGCCAGGAATGGCAGCACCTCAGGCAGATGGCAGGACCTCGCTGGCTCACCCAGCCACTCGACACTCAGCTCACGAGCACCCGGCACTGCCTACCTGTATTCCTCATCGCCACGCCAACGATCCTACTCGGGTTCTCTGGGCTTCCTGTTGAGGAAGGACGGAAGGTCAGAGGTGTTTGTGGATAGTTTTCTGTTCTGGTTCGACACTGTGGAGATGGTAAGAGTGGCAGGAGAGCCGTCAGTCTTCTACTCGGCCTGGGTGTTTCCTGTCTACATCCTCGCCTTCGTGTCTACTCTCCGCATGGTCATCACTCCTCACAATCCGTTAGTGTCTTCTGCTGGAGTTGCTCTGCAGGACCTTCCTTTCTTCATCATCCGGGTCGCTCTGATTGTTGTGTTTGGTTATGTAACTCCTGTGTTGTACACATTGAAAAATGTGCTGGTGAGCCTGACTTTTATCTACTTTACATTGCTGACTAGGCTGAGGATTTTCAGAAGGCAGAGCATGTTTTGAGGAGGAGTGGCGCATTATGTTGTTTATGAATGATCCACTTTGATTGTGGACTGTTGGAACAGTTGGTGTATTTTTGTGTAGGGAGCAGCACCAGAGAAACGTGGAGCTGACATGGAGCTGGTACTGGTGATCAAGAAGAACACGCTTTGAAATGTAATGGCTGCAAATGTATTATGAGGCCATCCATCCAAatcaaagtgtaaaaaaaatttattctggatttcaaacaaaaaaaggtgTGTAGGTGGAGTGTACAGTAAGCcagttgtcattttttttaatccaaatgtatttattgataCTTAATTTTATGTTACctgctacatttaaaaaaaaaaacacatttgttgtaaacaaaagcTTCTAAACCCTTTCAAACATTAActatgttaaataaataacctCTGTGTTAACTCAGGTGTAAACATTTTGACAAtattttaatttactttaatttACTTAATATTTATAATGtgcccacagagaattatcacctgacTTTGCAGCAGTGGAAACCCTTGAATCAGTCTGGGGTGATGCTTTTATTGATAAATATTGCAATATAAATAAGTGCtatgtaaattatttttttattgggtATTATTACTTAAAACACATGGTTACCGATAAAAAAAAGCTTATGCTTCTTTAacataacaaattaaaacatctctttattttaaacaatgtataaaaaaaactcacCCTAGCCTTCATTCTGACTGAATTGCCATTGTATTTCACTTCATTCATTCAATGTGGCATACCTTATGGAACAATGAGTTAAATAAGAAAaatcaacatcaataatatctttACCAAGGCACTTATTAGAATACGAAAAGTTAGCAACTGACTGAATAcacttacattttttaacagcTGCCACTGAGTGACCAAACTAGGTAACGTTATGTATTATGGGCTTGTGCGGACTACAAGATGTTTCCATGACAAATTTGTTTGATctgagacacaaacaaaaacagttcaGTTGCAATTTTCGTCTTCAGCATATATTCGCCTCTATCGCAGAACCAGCAGATGGCtatactgtattttcttttttatcttgtCTTGCCTCTTCTAACTCACTTAACTCACTCAAAGTAGCATCTGATCCTCATCTTTTGCCTGCaggcactgtgtgtgtatgtctgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtctgtgtgtgttttcatggcaATATGCCTCACTGAATTGTAACCTTGGGCGTTGTATATGGCTGTATCAATAAAGGATGCCACAGTGA

Function

NR:

description
PREDICTED: transmembrane protein 236-like isoform X2

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816459.1 True 2947 mRNA 0.42 4 19160906 19166143

Neighbor

gene id symbol gene type direction distance location
LOC120568757 LOC103360862,LOC102206787,LOC102301563 coding downstream 33711 19119142 ~ 19127195 (-)
LOC120568598 NA coding downstream 194131 18963255 ~ 18966775 (-)
si:ch211-106h4.4 NA coding downstream 199539 18937382 ~ 18961367 (-)
si:ch211-106h4.6 plxdc2,LOC103360851 coding downstream 230522 18919199 ~ 18930384 (-)
ackr4a LOC103360849 coding downstream 319732 18836672 ~ 18841174 (-)
stam stam coding upstream 2480 19168623 ~ 19181368 (-)
colec12 LOC104926162,LOC103361572 coding upstream 16039 19182182 ~ 19216250 (-)
yes1 LOC104926159,LOC103361570,LOC101479012 coding upstream 60694 19226837 ~ 19255535 (-)
lpin2 LOC103361566 coding upstream 299809 19465952 ~ 19485956 (-)
myom1a LOC103361565 coding upstream 320548 19486691 ~ 19509566 (-)
G116034 NA non-coding downstream 14131 19130548 ~ 19146775 (-)
LOC120568774 NA non-coding downstream 45558 19045675 ~ 19115348 (-)
G116027 NA non-coding downstream 59993 19099802 ~ 19100913 (-)
LOC120568773 NA non-coding downstream 97215 19062277 ~ 19063691 (-)
G115969 NA non-coding downstream 176031 18982304 ~ 18984875 (-)
G116050 NA non-coding upstream 372 19166515 ~ 19168530 (-)
G116080 NA non-coding upstream 54572 19220715 ~ 19221643 (-)
G116085 NA non-coding upstream 57120 19223263 ~ 19223489 (-)
G116082 NA non-coding upstream 57685 19223828 ~ 19224080 (-)
G116091 NA non-coding upstream 243906 19410049 ~ 19410276 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 225415 18931974 ~ 18935491 (-)
G115941 NA other downstream 314629 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 440319 18703064 ~ 18720587 (-)
sppl2 sppl2b other downstream 666418 18480670 ~ 18494488 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 1102747 18052984 ~ 18058159 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 55648 19221791 ~ 19222726 (-)
G116138 NA other upstream 298557 19464700 ~ 19465380 (-)
xcr1b.1 NA other upstream 627199 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1818658 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1841905 21008048 ~ 21010576 (-)

Expression


Co-expression Network