cldn18


Basic Information

Item Value
gene id cldn18
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33414075 ~ 33419694 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816488.1
ACCGCCTCCGCCCAACCGCCGCCATCACTACAAGGTGCCACTTTGGCCCGTTTTCATTCTCTGCCCGCAaaccacacacacctgctcacCTTTGGCACCTTAACTTCAACTCAATTCCATATGCAGCTACAGTTCAAGTGTTAGGCTCTGTATCTATTTCAACTGGGCACAAACCATTctgctcgcacacacacacactgtgcctACTAGTATATTTCCTAACTTCCGAGGGAGGAAACGACCATGGCGCCTTCAGTTCTGCAGAATGGCGGATTCGTTTTGGGCTTGATCGGCGCGGCAGCCCTCACCGCAGCTACTGCCATGAACAACTGGAGTGCCAAGGACAGGCAGGGGGATGTGGTGACGTCTGTGTACACCTACAAGGGTCTGTGGCAGGACTGTGAGACCGCTTCCTCAGGATTCACCGAGTGCCGCCCGCTCTACGGCCTCCTGGGCTTCTCAGGATCTTTCCAGGCGGTGCGAGCCCTGATGATAGTGGGCGTGGTGCTGGGGGTCCTCGGGGCCTTCATATCAGTGTTCTCACTGACCTGCCTTACAATGAACAGCATGGCGGACACCACCAAGGCCAAGATGAGCCTCACCGCTGGCATCATGTTCATCATCGGCGgtgtgtgtggcATTGCTGGGGCTTCCATCTATGCCAATCAGATTGTGGCCAGTTTCCGGATGTCCAGCATGCAAGGAGGGTATGGTGGAGGAATGGGAGGAGGAAACATGCAGGGAGGCTTTGGTGGAGGAATGGGAGGAGGATTACCCACATACACGTTTGGCCCTGCTCTGTTTGTAGCCTGGATAGGAGGGGGCGTCCTGGTCATTGGGGGCATCCTCAAGTCACTGGCATTCAAGGAAATGGTGAAAGATGAAAAACCACTTTACCCGGGGGTTGCTTACAAACCTCAGCCCCGCACCAAAAGCGACCTCGGTGATTACCATTCAGAGGGCGGCAAGAAAGACAAAGATTACGTGTAACTTCACACAAAGCTTAAACACTGGCAATATGTGTTTGCTTAAGGCGT

Function

NR:

description
claudin-18-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816488.1 True 1037 mRNA 0.54 5 33414075 33419694

Neighbor

gene id symbol gene type direction distance location
LOC120568799 LOC102786249,LOC100700331 coding upstream 4059 33408688 ~ 33410016 (+)
trnap-ugg_4 NA coding upstream 11753 33402251 ~ 33402322 (+)
stk25b stk25 coding upstream 48753 33356507 ~ 33365322 (+)
atp1b3a atp1b3,LOC104945299,LOC103356916 coding upstream 115289 33292188 ~ 33298786 (+)
gk5 gk5 coding upstream 128609 33273117 ~ 33285466 (+)
hs2st1a hs2st1 coding downstream 14508 33434202 ~ 33473617 (+)
lrrc8da LOC103355795 coding downstream 113380 33533074 ~ 33549879 (+)
LOC120569066 NA coding downstream 131938 33551632 ~ 33559908 (+)
hfm1 hfm1 coding downstream 154470 33574164 ~ 33601451 (+)
cdc7 cdc7 coding downstream 182369 33602063 ~ 33610603 (+)
G119767 NA non-coding upstream 123495 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 144873 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 220876 33192587 ~ 33193199 (+)
G119733 NA non-coding upstream 228183 33181456 ~ 33185892 (+)
G119640 NA non-coding upstream 516057 32897747 ~ 32898018 (+)
G119901 NA non-coding downstream 118478 33538172 ~ 33562071 (+)
G119922 NA non-coding downstream 178179 33597873 ~ 33598657 (+)
LOC120569016 NA non-coding downstream 441744 33861438 ~ 33866996 (+)
LOC120569017 NA non-coding downstream 447701 33867395 ~ 33870784 (+)
G119961 NA non-coding downstream 448075 33867769 ~ 33868000 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 106211 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 247975 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 364994 32988817 ~ 33049081 (+)
G119585 NA other upstream 632604 32780988 ~ 32781471 (+)
G119584 vangl2,LOC102795188 other upstream 638393 32775074 ~ 32775682 (+)
pkn2a pkn2 other downstream 57642 33477336 ~ 33515424 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 391274 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 438848 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 535472 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 744386 34164080 ~ 34165852 (+)

Expression


Co-expression Network