LOC120568788 (gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812)


Basic Information

Item Value
gene id LOC120568788
gene name gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13411953 ~ 13420965 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816492.1
CATGCGCATCGCTCAGCTAACCCTTTGGCTACGTGTACCCGGTGTGTGGAAGTGTTCAGGTATCGCATCTCTGCTGGGTAACAAGCTGCCATTAACATCTAAAACGCCTTAAAAGAGCGGAATCATGGGAGGTGCGCAGAGTATGGAGATACCGGGAGGAGGCTCTGAGGGCTACCACGTCCTCCGGGTTCAAGAGAACTCGCCAGGACACCGCGCAGGACTGGAGCCTTTCTTTGACTTTATTGTCTCCATCAACAACACCAGACTGAACAAGGACAATGACACATTGAAGGACTTGCTGAAAGCCAGTGTGGAGAAACCGGTTAAGATGCTAGTTTACTCCTCGAAGACCCTGGAGCTGAGGGAGTCTACGGTCACCCCTAGCAACCTGTGGGGGGGCCAGGGCTTGCTTGGCGTCTCCATTCGTTTCTGCAGCTTTGAGGGAGCCAATGAGAATGTTTGGCACGTGCTGgaagTGGAGCCTAATTCCCCAGCAGCCCTCGCTGGCTTGCGGCCGCACACTGACTACATCATTGGAGCCGACACTGTTATGAATGAGTCAGAGGACCTGTTCTCTCTGATAGAGAGCCATGAGGGGAAAGGCCTGAAGCTCTATGTGTACAACACAGACACCGATAACTGCAGGGAAGTGATCATCACACCCAACAGTGCCTGGGGAGGAGAGGGCAGCCTTGGATGTGGGATTGGCTATGGATACCTCCACAGGATTCCCACTAGGCCTTTTGAGGAGGGGAAGAAGATCAGCTTCCCTGGACACTCTCCCAGTGAGCCCGTCAGTCCGCTGAAGGATGGCTTCACTGAgGTCCAGCTTTCAGCAGTGTCCCCCACTGCACCTGCTGTCCCCACTGGCCTGGAAGAAACACTGTCAGGCTTGTCGATCAGCACAGCTCCGCCCTCCATGCCCAGGGAGCTGCAGACAGGTTTGCCCACAGTTCCTctgctctcctcctccaccagcCTCAGCCCCGCCCTCAGCCCACTCACTCCACTGAATCCTGCCACCACAGGCTTCAACCCCGCCACCACGCTACCAGgTCTGATGTCCCTCCCAGGTGGCTTACCTCCGCTCCCCAACTTGCCTAACCTCAACCTGCCACTCCCAGACCTCAGTGCCGTGTCACTAGCAGGCACCTTACCAGTAGGAACTACAGTGCCCCCTCTGGCCGCTCTCCCACACCTCAACCTCCCAGGTCTGGCCCCCTTACCCCCACTACCCACTCTGCCCATGCTTCCGTCCCAGctgcctcctctcctccctcaggGAATGGTCCCCCTGCTGCCCACCTCCACCCCCGCTCCCACAGCCTCGGTCACGGTCACAGCAGCGCCTGAGGCCGAGCCCGCCGCCAACCCCACAGTCGCCACGGAAGCGGCCTCCAGTAACGCCACGGAATCCCCGGCCCCCACGGAAACAACACTAACGTCATAACATGGGAAAGAAGATCCCGCTTGCCATTAAACCAAAACACACATCTGGTTTCTcttccaccccccccccttccgtctgtctttctttctgtgtttttctatttatttggCCAAGAGGGACTGGCAGACCGCTGCACCGGTTCAGACACCGAGGTCGGCATGCTCCAGGTATGGGTGAGGGAGCTTGTGAGGAGCGATGGAGAATGAATAGATATGAAGAATGGAGGATATTTGGAGGTCTTTATTACCAGATTGTCATAGAGCTTGTCAAAGCCACTGTATGAGGAGGACGAGGTGTACTGTTCGGTTTGTAATTTGCTTCGCTCTTCTGCTGTTACAACAAGGCAAAGAACTAGCTTAGGACTTTTCCCTTTCTGATCTGGCGAGCCTCTCTGTTTTACACTTGtgtttttatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtgtatgtTAATGGGGCTGAATGATAAATCAAATTTAGTGAATTCCTTATGTTATAAATGACTACGAATAGAACAACTAATGACACCTAACTGGAAGCTGAGCTCACAGTCCAGTCCAGAGGTCATTAAACTGGTCGTACTGGAATAAACCAGGACAAAGATATCAGAAGTGGGCCTACAGGAGAAAAACATCCTTCACTGCTGCTTAAAACATAGGTTAAAGATAAAGGTAAATATGAATTTATGTTATAGATTGGTCTCATCGTTCAGCCCGTATATGTAACCCTTTATCATGAGTTAATGTAACCCCTGACCAATAGATTAATTTGATTGAcatgtatacatttttgttgaaattGCTGTAGGAGTGTCTCCACCCAATGAATGAATCTGCATTGTTTTGCACCACCCTTGTGTTTTGAAATGATTACTCTGTCCCTTTTTGTACGTCTCCATTTATATCCAGAACAGTATCCGTCTCTACTACACAGGGATGGTAAGAGCCTGAAGGCCATGCCAGAGAGGTTTGCAGTTACAAGAAATACGGAGAAGGGTGTATGTGCTTGCTGCTGGGTGATCAGTAGGTAGGGTGAAACATGGGTGCAGGGATATTAATTACACAGCGCGTCTCCTGGCATGGCCAAAGCAAATTGGTAGGCAGTGATGCAGTACAACCACAAGGTGTCACTGTAACTGACACTGTAAACAGAACTTGATGAAAACATCGACACTGTGCACAGTGTGAGCAATAAAGCCAAATTAATTTTA

Function

symbol description
gorasp2 Predicted to be involved in Golgi organization. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human GORASP2 (golgi reassembly stacking protein 2).

NR:

description
PREDICTED: Golgi reassembly-stacking protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816492.1 True 2689 mRNA 0.51 10 13411953 13420965

Neighbor

gene id symbol gene type direction distance location
LOC120568628 LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770 coding upstream 1498 13394488 ~ 13410455 (+)
LOC120567765 NA coding upstream 19350 13389221 ~ 13392603 (+)
LOC120568688 lect1 coding upstream 125775 13279076 ~ 13286178 (+)
LOC120568782 pcdh8 coding upstream 133524 13274162 ~ 13278429 (+)
LOC120568679 NA coding upstream 188099 13213316 ~ 13223854 (+)
LOC120568709 LOC103354345,LOC100697448 coding downstream 66496 13487461 ~ 13554660 (+)
anxa13l anxa13,LOC100703370 coding downstream 134620 13555585 ~ 13566467 (+)
LOC120568315 NA coding downstream 157267 13578232 ~ 13592369 (+)
LOC120568344 LOC103354340 coding downstream 199595 13620560 ~ 13629924 (+)
yme1l1b LOC103354339,LOC104952441 coding downstream 209293 13630258 ~ 13640164 (+)
G114063 NA non-coding upstream 55903 13354254 ~ 13356050 (+)
G114032 NA non-coding upstream 122950 13288193 ~ 13289003 (+)
G114055 NA non-coding upstream 124734 13286650 ~ 13287219 (+)
LOC120568783 NA non-coding upstream 157368 13250751 ~ 13254585 (+)
G114037 NA non-coding upstream 204930 13204825 ~ 13207023 (+)
G114094 NA non-coding downstream 48546 13469511 ~ 13472357 (+)
G114095 NA non-coding downstream 52049 13473014 ~ 13473251 (+)
G114271 NA non-coding downstream 238077 13659042 ~ 13659381 (+)
G114301 NA non-coding downstream 311717 13732682 ~ 13732963 (+)
LOC120567951 NA non-coding downstream 322310 13743275 ~ 13840945 (+)
si:ch73-71c20.5 NA other upstream 225589 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 286490 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 294597 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 337359 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 451604 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 866185 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1564812 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 1592778 15013743 ~ 15026208 (+)
G114789 NA other downstream 1730831 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1917592 15338557 ~ 15368780 (+)

Expression


Co-expression Network