casp8


Basic Information

Item Value
gene id casp8
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13196739 ~ 13207620 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816524.1
ATCTATGTGAAAGTGAAACCGGTCGAGGGAGCATACGAACAACACACACGAAAATACTTCCTTACTTACATCcataaaaaaagacaacttCACTTGTGAATTGTTcgcttttaaaaagtaaaaagatttACAGTCGCTTCTTGGGCGTAAATCGACAGCGCAAGTACAGTGAGCTTAACACCAGGCCTGTGCTGGAGGGAGTGGGTGTGTGATGGATAGGCTGAAGCTGTCCCGCATAGATGAGGAGCTGGTGTCGTCTGAGGTGGCAGCTCTCTGCTTCTTGTGTCGTGATGTCATCAATAGGAAACGCCTGGAGGGGATCGTGGATGCAAAAGGCCTGTTCTTGAGACTAGAAGAGAAAGGACAGTTGGAGAACGATTTCTTCCTGAGTCAGCTGCTCCAAACTATCGGTCGAGCAGATCTCCTCAACCTGCTGGAGACAGACAGCAGGCGACCAGAAGAAACCGACGCAAATCCCGTGCTGTCGGATTACAGGGTGATGCTGTACCGAGTATACGAGGACATGACAGGGGAAAATCTTGAGAAGATGAAGTTTCTGTTGTCCAACAAACTGGGCAAAGCAAAAATTGAGGCATGCAATACAGCACTGGATGTGTTTGCTGAAATGGAACAGGCTGGTTTACTGTCAAACACAAACCTACATGAGCTGCATACAATGCTGCTGGAGTTTGATCAACAACTGGCATCGACTTTACAGCGCTACAGGGAAGCAACCCAGCTGCCTCGAGTTCCTCGCAGCAGTGTGGATTCCCAGAGGGTCAACACCTTTCAGCCATCACAACCCAGCGACGCAGGACCATCCGATGCATTCGTTGTCTCCGATGCAGAACCAAAGACCTCCCCTCTTTTTGATCACACAGACTACTACTCCCTGAGTCATATCCCAcgtggtttgtgtgtggtcatcAATAATGAGAACTTCTGGGGAACAGGATTGAAAAATCGAGGCGGGACTCAGGAGGATGCAAAGGCTCTGCACACAGTGTTCACCCGCCTTGGCTTTGAAGTGGAGGTACACGACGACCTGACTGCCCGCGAGATGCGTCTTGTACTGGAAAAGCTGGGCTCAAGGAATTTTTTGGATGATGATGCCTTGGTGGTTAGCGTGCTGTCCCATGGAGAAAAGGGATGTGTCTATGGGACTGATGAGAAGGCGGTGCTTTTGCAAGAACTCTCCAAGCCCTTCACTAGTGGGAGAGCTCCCACCTTGGCAGGGAAGCCCAAACTCTTCTTCATCCAAGCGTGTCAGGGAAACAACTACCAGAAAGGATCCCTGCCGTGTCCTCCAAAGCCAAGACAGGAGGAGGGGGAAAGACAGAGCCGCCTGGAGGAAGATGCAGGTCGCGTGGAGGGTGAGACAGTGCCTTGGGATGCTGACTTTCTGCTGGGCATGTCCACCGTGCCAGAGTGCAAGTCGTTTCGAAGCACTGCCACAGGCTCCATCTACATCCAGGAGCTGTGCAGGCAGCTGATGAGGTCAGCAGAAAGCTCGGAGATGGATGATGTGCTCACTGTGCTGACACGTGTGAACAGGGAGGTCAGCAAAAGAGAATATTTAAACTACAAACAAATGCCAGAGCCCAAGTACACCCTCACCAAGAAGCTCGTCCTCAAATTTGTTTGAGCTGACCGGGACCAAGTGCAACGCTGAAAATGTGCCATATTCACATAGAGTCACATAGACCCAACTGGTTTACTGtgtgtatgactttttttgtttgttttttaatccgACTTCATGATACAACTTAAAGGATGAATTTGAATGTAGGCGTCTCTGTCTGGAGAGTCTGATATCTCTTAATCTTGCAAAAGCATCATGTTATATAAAATGTAACAGAAGCCACTCCCGTGTGATTTaggaaaaataaacaatcagaCCTCA
>XM_039816525.1
TTTCTCCTCCAACACATGAACTCATCAACTAATGTACCAGATACAGTTTCGTTACAGTTTCAGACTCCAGTGTGTCGTGCACACACACCAATGCAAAGTTAAGGAAAGGGATGTCAATGGGACTGCTGTGAGGTACTACCTattttacccaccgaactgtcgtaaTTCAACTATGAAAAGCAAGTACAGTGAGCTTAACACCAGGCCTGTGCTGGAGGGAGTGGGTGTGTGATGGATAGGCTGAAGCTGTCCCGCATAGATGAGGAGCTGGTGTCGTCTGAGGTGGCAGCTCTCTGCTTCTTGTGTCGTGATGTCATCAATAGGAAACGCCTGGAGGGGATCGTGGATGCAAAAGGCCTGTTCTTGAGACTAGAAGAGAAAGGACAGTTGGAGAACGATTTCTTCCTGAGTCAGCTGCTCCAAACTATCGGTCGAGCAGATCTCCTCAACCTGCTGGAGACAGACAGCAGGCGACCAGAAGAAACCGACGCAAATCCCGTGCTGTCGGATTACAGGGTGATGCTGTACCGAGTATACGAGGACATGACAGGGGAAAATCTTGAGAAGATGAAGTTTCTGTTGTCCAACAAACTGGGCAAAGCAAAAATTGAGGCATGCAATACAGCACTGGATGTGTTTGCTGAAATGGAACAGGCTGGTTTACTGTCAAACACAAACCTACATGAGCTGCATACAATGCTGCTGGAGTTTGATCAACAACTGGCATCGACTTTACAGCGCTACAGGGAAGCAACCCAGCTGCCTCGAGTTCCTCGCAGCAGTGTGGATTCCCAGAGGGTCAACACCTTTCAGCCATCACAACCCAGCGACGCAGGACCATCCGATGCATTCGTTGTCTCCGATGCAGAACCAAAGACCTCCCCTCTTTTTGATCACACAGACTACTACTCCCTGAGTCATATCCCAcgtggtttgtgtgtggtcatcAATAATGAGAACTTCTGGGGAACAGGATTGAAAAATCGAGGCGGGACTCAGGAGGATGCAAAGGCTCTGCACACAGTGTTCACCCGCCTTGGCTTTGAAGTGGAGGTACACGACGACCTGACTGCCCGCGAGATGCGTCTTGTACTGGAAAAGCTGGGCTCAAGGAATTTTTTGGATGATGATGCCTTGGTGGTTAGCGTGCTGTCCCATGGAGAAAAGGGATGTGTCTATGGGACTGATGAGAAGGCGGTGCTTTTGCAAGAACTCTCCAAGCCCTTCACTAGTGGGAGAGCTCCCACCTTGGCAGGGAAGCCCAAACTCTTCTTCATCCAAGCGTGTCAGGGAAACAACTACCAGAAAGGATCCCTGCCGTGTCCTCCAAAGCCAAGACAGGAGGAGGGGGAAAGACAGAGCCGCCTGGAGGAAGATGCAGGTCGCGTGGAGGGTGAGACAGTGCCTTGGGATGCTGACTTTCTGCTGGGCATGTCCACCGTGCCAGAGTGCAAGTCGTTTCGAAGCACTGCCACAGGCTCCATCTACATCCAGGAGCTGTGCAGGCAGCTGATGAGGTCAGCAGAAAGCTCGGAGATGGATGATGTGCTCACTGTGCTGACACGTGTGAACAGGGAGGTCAGCAAAAGAGAATATTTAAACTACAAACAAATGCCAGAGCCCAAGTACACCCTCACCAAGAAGCTCGTCCTCAAATTTGTTTGAGCTGACCGGGACCAAGTGCAACGCTGAAAATGTGCCATATTCACATAGAGTCACATAGACCCAACTGGTTTACTGtgtgtatgactttttttgtttgttttttaatccgACTTCATGATACAACTTAAAGGATGAATTTGAATGTAGGCGTCTCTGTCTGGAGAGTCTGATATCTCTTAATCTTGCAAAAGCATCATGTTATATAAAATGTAACAGAAGCCACTCCCGTGTGATTTaggaaaaataaacaatcagaCCTCA
>XM_039816526.1
GGAGTAAAGGGCTTTAAAACAAGTACAGTGAGCTTAACACCAGGCCTGTGCTGGAGGGAGTGGGTGTGTGATGGATAGGCTGAAGCTGTCCCGCATAGATGAGGAGCTGGTGTCGTCTGAGGTGGCAGCTCTCTGCTTCTTGTGTCGTGATGTCATCAATAGGAAACGCCTGGAGGGGATCGTGGATGCAAAAGGCCTGTTCTTGAGACTAGAAGAGAAAGGACAGTTGGAGAACGATTTCTTCCTGAGTCAGCTGCTCCAAACTATCGGTCGAGCAGATCTCCTCAACCTGCTGGAGACAGACAGCAGGCGACCAGAAGAAACCGACGCAAATCCCGTGCTGTCGGATTACAGGGTGATGCTGTACCGAGTATACGAGGACATGACAGGGGAAAATCTTGAGAAGATGAAGTTTCTGTTGTCCAACAAACTGGGCAAAGCAAAAATTGAGGCATGCAATACAGCACTGGATGTGTTTGCTGAAATGGAACAGGCTGGTTTACTGTCAAACACAAACCTACATGAGCTGCATACAATGCTGCTGGAGTTTGATCAACAACTGGCATCGACTTTACAGCGCTACAGGGAAGCAACCCAGCTGCCTCGAGTTCCTCGCAGCAGTGTGGATTCCCAGAGGGTCAACACCTTTCAGCCATCACAACCCAGCGACGCAGGACCATCCGATGCATTCGTTGTCTCCGATGCAGAACCAAAGACCTCCCCTCTTTTTGATCACACAGACTACTACTCCCTGAGTCATATCCCAcgtggtttgtgtgtggtcatcAATAATGAGAACTTCTGGGGAACAGGATTGAAAAATCGAGGCGGGACTCAGGAGGATGCAAAGGCTCTGCACACAGTGTTCACCCGCCTTGGCTTTGAAGTGGAGGTACACGACGACCTGACTGCCCGCGAGATGCGTCTTGTACTGGAAAAGCTGGGCTCAAGGAATTTTTTGGATGATGATGCCTTGGTGGTTAGCGTGCTGTCCCATGGAGAAAAGGGATGTGTCTATGGGACTGATGAGAAGGCGGTGCTTTTGCAAGAACTCTCCAAGCCCTTCACTAGTGGGAGAGCTCCCACCTTGGCAGGGAAGCCCAAACTCTTCTTCATCCAAGCGTGTCAGGGAAACAACTACCAGAAAGGATCCCTGCCGTGTCCTCCAAAGCCAAGACAGGAGGAGGGGGAAAGACAGAGCCGCCTGGAGGAAGATGCAGGTCGCGTGGAGGGTGAGACAGTGCCTTGGGATGCTGACTTTCTGCTGGGCATGTCCACCGTGCCAGAGTGCAAGTCGTTTCGAAGCACTGCCACAGGCTCCATCTACATCCAGGAGCTGTGCAGGCAGCTGATGAGGTCAGCAGAAAGCTCGGAGATGGATGATGTGCTCACTGTGCTGACACGTGTGAACAGGGAGGTCAGCAAAAGAGAATATTTAAACTACAAACAAATGCCAGAGCCCAAGTACACCCTCACCAAGAAGCTCGTCCTCAAATTTGTTTGAGCTGACCGGGACCAAGTGCAACGCTGAAAATGTGCCATATTCACATAGAGTCACATAGACCCAACTGGTTTACTGtgtgtatgactttttttgtttgttttttaatccgACTTCATGATACAACTTAAAGGATGAATTTGAATGTAGGCGTCTCTGTCTGGAGAGTCTGATATCTCTTAATCTTGCAAAAGCATCATGTTATATAAAATGTAACAGAAGCCACTCCCGTGTGATTTaggaaaaataaacaatcagaCCTCA

Function

NR:

description
caspase 8

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0006508 proteolysis biological_process
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816524.1 False 1906 mRNA 0.49 12 13196739 13206963
XM_039816525.1 True 1926 mRNA 0.49 12 13196739 13207620
XM_039816526.1 False 1765 mRNA 0.50 12 13196739 13206226

Neighbor

gene id symbol gene type direction distance location
tmbim1a tmbim1 coding downstream 782 13186254 ~ 13195957 (-)
LOC120568263 LOC104953400 coding downstream 38449 13152095 ~ 13158290 (-)
LOC120568264 LOC104953400 coding downstream 45261 13132932 ~ 13151478 (-)
cfap410 cunh21orf2,LOC102788189 coding downstream 81450 13112363 ~ 13115289 (-)
xirp1 LOC104959684 coding downstream 252021 12931398 ~ 12944718 (-)
LOC120568680 catip coding upstream 410 13208030 ~ 13214290 (-)
LOC120568677 NA coding upstream 7260 13214880 ~ 13218070 (-)
LOC120567607 LOC104935780 coding upstream 17277 13224897 ~ 13230904 (-)
LOC120568781 NA coding upstream 24476 13232096 ~ 13236247 (-)
sugt1 sugt1 coding upstream 81738 13289358 ~ 13310084 (-)
G114177 NA non-coding downstream 18988 13176803 ~ 13177751 (-)
G114166 rpl37a,RPL37A non-coding downstream 79289 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 92342 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 101910 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 105423 13088686 ~ 13091316 (-)
G114196 lect1 non-coding upstream 73311 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 79031 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 80562 13288182 ~ 13288993 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding upstream 186841 13394461 ~ 13406830 (-)
LOC120568710 NA non-coding upstream 325518 13533138 ~ 13549466 (-)
G114152 NA other downstream 108176 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 221411 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 428114 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 588170 12601180 ~ 12608569 (-)
G113805 NA other downstream 978472 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 261911 13469531 ~ 13482225 (-)
tfr1a NA other upstream 742251 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1405993 14613613 ~ 14618224 (-)
G114680 NA other upstream 1588298 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2082462 15290082 ~ 15304610 (-)

Expression


Co-expression Network