LOC120568820 (LOC101162955,LOC103374738)


Basic Information

Item Value
gene id LOC120568820
gene name LOC101162955,LOC103374738
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32575313 ~ 32586349 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816543.1
GGGATGTGTTGAATAATGGGCGGGGGGTGTGAAGCTATAAACTGGTCCCTCCATCAGGAAGCCCGGATAGACGACTGGCTCAATTTTAACGTGAAACAACCTGCCGACCCTTCATCACCTTTCATCATGCTTTCCGTGTCCGAGATTGTGTCTGCCGAAAGCTATGAGGAGTGTCGGACCacagctgattggctgctgtcCAACACACAGGTGCGGCCCACTGTGGGAATTGTCTGCGGTTCAGGTTTGGGGGGGCTGGCTGAGAAGATCAAGGACCCTCAGGTCTTCAAATACTGTGACATTCCCAACTTCCCCCGGAGCACAGtgcATGGTCATGCTGGCCAGCTGGTGTTTGGAACTCTTAAAGGGAAGCCGTGTGTCTGCATGCAGGGCAGGTTCCACCTGTACGAGGGCCACACCATCCAGAAGATCACGCTGCCCATGCGTGTCTTCAAGCTGATGGGCGTGGAGACGGTCATCCTGACCAACGCGGCTGGAGGCCTCAACCAGGACTACAAAGTGGGAGACGTCATGATCCTCAAGGACCACATCAACATGCCGGGGTTCGCTGGAATCAACCCGTTGGCTGGACCAAATGATGACCgGTTTGGCGTCCGTTTCCCCTGCATGTCTGATGCCTACGACCGCGAGCTGCGTCAGTTGGCCCATGATGTGGCATCAGAGCTGGGCTACGACAACTTCCTGCGGGAGGGGGTGTACTGCGTCGTGGGAGGTCCCTCCTTTGAAACCATCGCTGAGTGTCGCATGCTGCACAGTCTGGGTGCAGATGCTGTTGGGATGAGCACTGTGCACGAGGTTATCGTCGCCCGCCACGCCGAGATGCGTGTCTTCGCCCTGTCCTTAATCAGCAACCGCTCGGTGATGGACTACGACAGCCAGGAGAAGGCCAACCACAAGGAAGTGCTGGAAACGGGCATGATGAGGGCCGAGCAGCTGGAGAAGCTGGTGTCCACCATGGTGACCCGGCTGGAGCCAATCGACAACAATGCCTTCTGAACATGTGACTGACGCCGCTGTCAGGCTCCATCTCCGCCAGACAGcacgccccccccccacccggaTGGGTTTGCTACTTACTACATAAAATAAGTTTCTTTGCTTTGTTTCCACTGACTGTTACTTTAAATCTAGTCTTAAAAAATTCCTGGAAACTGGTACATTTTCTTTCTACACTCCTCTGTCAACaacgtttacatttttttttttaaagcgtaCAGATATATAATTTGAAATTTTCTGACAaatgccctgctgtgatgtctTATTGTATTCAGCTGACTGTTTCAGTGAAACAGTATTGATTGTAAATTCTAAAGTAATagcttttaaattaaatatacatatttattattCTTTTCGGTTCTTTTACATTCCCAGATATCAGATAACTAATATGAATACAGAGATATTCACATGATTTAATGTAAAACGCCGGCACATCATGCAAGTCTTAATGAGATTACGGCGGAAAGGTGGGAATAATAATTTCATAACGGTATAAAAGAGGTGTAAAATGTTATAAAATATTTATACTAAATATATTTAActggtgtttttatttgttttgataaTATATCGACAGTTTGATGAACAGTTGGTGAAAAGGGATTATAACCTGCATGAGGACAGTTACCGAAGTCAAAATCTCCTTCCATGTCTAATCACTGTTCGCAGACTGGGATCTATGCTTTCAGAAGTACTGTACTAAACACTATGTATGGATCTACTTTTACAATAAAATGACTAAACTTTAAAGCAA

Function

NR:

description
purine nucleoside phosphorylase-like

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0004731 purine-nucleoside phosphorylase activity molecular_function

KEGG:

id description
K03783 punA, PNP; purine-nucleoside phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816543.1 True 1780 mRNA 0.47 6 32575313 32586349

Neighbor

gene id symbol gene type direction distance location
LOC120568570 NA coding upstream 88905 32472620 ~ 32486408 (+)
LOC120568571 NA coding upstream 134218 32437458 ~ 32441095 (+)
LOC120568561 NA coding upstream 219491 32347289 ~ 32355822 (+)
kirrel1b LOC101488125,LOC102302400,LOC100705859 coding upstream 249666 32232208 ~ 32325647 (+)
trnar-ucu_14 NA coding upstream 448883 32126357 ~ 32126430 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding downstream 64955 32651304 ~ 32656857 (+)
LOC120568452 LOC103367094 coding downstream 130404 32716753 ~ 32721611 (+)
myadmb LOC104961532,LOC101466547 coding downstream 256750 32843099 ~ 32852397 (+)
ltb4r2b NA coding downstream 343102 32929451 ~ 32938337 (+)
sdr39u1 sdr39u1 coding downstream 354857 32941206 ~ 32945386 (+)
G119519 NA non-coding upstream 10827 32563841 ~ 32564486 (+)
G119453 kcnj10 non-coding upstream 19575 32549144 ~ 32555738 (+)
LOC120568573 NA non-coding upstream 70020 32504212 ~ 32505293 (+)
G119417 NA non-coding upstream 171602 32372563 ~ 32403711 (+)
G119416 NA non-coding upstream 210545 32364566 ~ 32364768 (+)
G119541 NA non-coding downstream 47279 32633628 ~ 32634719 (+)
G119556 NA non-coding downstream 122946 32709295 ~ 32710372 (+)
G119579 NA non-coding downstream 171034 32757383 ~ 32757653 (+)
G119583 vangl2,LOC103367097 non-coding downstream 184079 32770428 ~ 32770954 (+)
G119586 NA non-coding downstream 206668 32793017 ~ 32793495 (+)
LOC120568569 NA other upstream 103743 32452705 ~ 32471570 (+)
cadm3 cadm3 other upstream 348830 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 504001 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 660609 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 705818 31865755 ~ 31869495 (+)
G119582 vangl2,LOC103137974 other downstream 182358 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 188725 32775074 ~ 32775682 (+)
G119585 NA other downstream 194639 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 402468 32988817 ~ 33049081 (+)
LOC120568463 NA other downstream 577567 33163916 ~ 33166100 (+)

Expression


Co-expression Network