rem2 (rem2)


Basic Information

Item Value
gene id rem2
gene name rem2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12176857 ~ 12207670 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816553.1
agagagagagagagagagagagagaagagggatgCAGGTTAACTGTCTCCGCTGGTCGTTGGGACGCCATAAGGACAAGGCGGGATGTGTTATTGTGCTTCTTATTCCAAACGGAAACGCAGGTGTAGCGCCTCTTAATCCCCTTGTCCAGCCTACTACTACCTATCCCAGGGTTCTATGCGCCGCACCTCCCTTTTCAACCCACCAGAGGAGGATTTTACGCGCCGGTGTGGAAAGAATAACATCCTGTTAAATGAGATGTGGCGCGTCTCTTTTGTGCACCGTCTGTTACCGCCGCTGTGAATGTGATGCCGGGTCTTCGCCCAGCACAGATGACCTGAACCGGGCGGCGGAGGCGGTTGCAACTACAGCACTTGTTCCATAAAGAGAATACTTACCGATGACCATGGCTGACCAGTACAAAATGTTTCTCACCACGGCGCCCCCCCTCCGGCGTGGAAGCACACCCCTGCCTCTCAAACACCAGCTGAGGAGGGAAGAGGCCGTGTCTGAGGACTGTGATTGGATCCCGGACATGGCAGAGCCTGCCACGTTGCCTATCAGTGACACAGCGGTGCCTCAGGATGAGTCCTTCAGCCAATCAACAGCCGCCCAGTCGGCTTACCACAGCCACGGTGGGGCATTGAGGATAGTGCTACTTGGACAGAATGGCGTGGGCAAGACGTCGCTTGCCTTATCTCTGACCGGGCAGTCGGACAGATCCCTCTCTATAGACTCTGAGACACAAGCATGTGGTGAGGGCTACGAGAGCTCAGTGACGGTCGACGACGAGGACAGCAAAGTCATAGTTTTTGACAACTGGAAACAGGACCTGTCCACTCTACAGTGTGATGTGTGTATCCTGGTCTTCTCAGTGACTGACAGGCGAAGTTTCCACCGCACCGCCCAGCTCCGCCTCCTCCTCAGGGAGTCCCAGCCACACACACCAATCATCCTGGTGGGCAACAAGAGCGACCTTGTCCGCTCCCGTGAAATCAGCTCAGAGGAGGCCCAATCCAGTGCCATGATGTTCGACTGTCTCTACATGGAGCTCTCAGCCTCCCTGGACCACGGTACCAACGAGCTGTTGGAGGCCGCAGTTCGGACTGCGAGGGGCGACTGCGTGGGCCCCGGGTGGACCGACGGCGAGCCCGGGGCAGGCCGCAGGGAGAGCCTGACCAGCCGGGCCAAGCGCTTCCTGTCAGGGCTGGTATCGTATGGTCGAGAGCGGGACCGCGATCGGGGGCGCTACAGGGAGATGAGCCGCCACCGGGGCAGCAAGATCCTCCGCCAGAAGTCTCGCTCCTGCCACGACCTCAGTGCactgtgatacacacacacgcgcatacaCACTCccacatatgtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccagatcaAATGATGTGGAGGAGACCAAGAGGATAAAATGGAAGATAGTAGGGAGGAGCAGATGAGCATTAGCAGATTAAGGTcagaaaaggagagaagggagagaaagaaagagaaaaagttgGATAGCCTAGATAGAGCCGAAATCAGCCTGGGTCGCAGCACTGAACCTTTATCTTCTGCCTATCAGTGAAACCAACtttgaaagagaaagaggcCAGGTTGGAGAGAACAACAGATAAACAGATAATGAAGCAAGCTTGATTTGCTGCTCCAGCTTGGGTGAATCAGCGAGCACTTATTACCTGATtagatgaagagagagaaaattagTAACAGTGGAGAGAGTCACATCAAGATGCTGATTGGACACTAACTGTGGCGAAACGGGAGGGGggtcacacataaacacacacccaaGTAGCACGCACTGATTATGTAGAGACTGATAGCGATCTAATGTATATCTATTGTGAACCCTGTTTTATAGCATGCCGAGTAGACGATCTAAGACATGACGCTGTAGGATTTACAGTTCCATGACACTGGATTGACGGTACCTCAGTAGCCAATAGCTAATGCACAATCCAGCTAGTGTCTCTAGCAATGCCATCTCAAAGGCAAGACCCTTTAtttatatgaagaaaaaaaaaatgcttctaGTGTGAGCATTTTGTAGCCACACTCTTCACAGTGCATCTACCTTTGTGTCCCGGACTGATTTTGAAGTGTTTGATGATACCACCAATGGCATACGTTCATCTGTGATTTTTATACAAGGCTAAAAACATCAGCGCCCAAGCCATATTTCCGCTGAATGCCTCATGAGCGATCAGCACAAAGAACCCTTTACCGAAGGATGTGGAGTGAAAGTAAAAAGGTCAAAGTGGCATGAGGAACTAGACGTGCAGACTGAACTTTTCTTCAATAGACGCTGAGTCACAGAACACAGGGATGTTCTTGAAGCACAGGAGGACAAACAAGAGAAAACCTAATCTACctttgatgttttttatttttttctctttttacccACTGGCATTATTATGTATGTTGAGACTGAATACTGTGGGGGGCTGACCACAAAGGTGACCCAAAAGAGAACGTTCTGGAAACGTATGGATATCTCGTCAAGCGTGGCAGCATCACTGACACAAGCTCACTTGTTTGTCACAGTCTACTAAGCACTCTCGTCTTTCCACTGAGAATAAATTCATTTTTGTTTGACATCCTGAA

Function

symbol description
rem2 Enables calcium channel regulator activity. Acts upstream of or within dopaminergic neuron differentiation. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in eye and optic tectum. Orthologous to human REM2 (RRAD and GEM like GTPase 2).

NR:

description
PREDICTED: GTP-binding protein REM 2

GO:

id name namespace
GO:0071542 dopaminergic neuron differentiation biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816553.1 True 2698 mRNA 0.51 5 12176857 12207670

Neighbor

gene id symbol gene type direction distance location
tgm1l1 LOC103370497 coding downstream 24776 12131437 ~ 12152081 (-)
dad1 dad1,LOC101158164 coding downstream 54779 12116802 ~ 12122078 (-)
pigr NA coding downstream 63610 12109272 ~ 12113247 (-)
si:ch73-382f3.1 LOC104929977,LOC103369580 coding downstream 646052 11527843 ~ 11530805 (-)
selenop2 LOC103369579 coding downstream 652020 11519469 ~ 11524837 (-)
carmil3 NA coding upstream 22451 12230121 ~ 12328040 (-)
LOC120568866 cdh24,LOC102798176 coding upstream 153313 12360983 ~ 12514630 (-)
psmb5 psmb5,LOC108238608 coding upstream 338691 12546361 ~ 12553571 (-)
psmb11a psmb11,LOC102789740,LOC102210751 coding upstream 345898 12553568 ~ 12554626 (-)
homeza homez coding upstream 408950 12616620 ~ 12621709 (-)
G113772 NA non-coding downstream 1275 12163161 ~ 12175582 (-)
G113755 NA non-coding downstream 48712 12126957 ~ 12128145 (-)
G113748 NA non-coding downstream 53761 12107353 ~ 12123096 (-)
LOC120568725 NA non-coding downstream 73605 12100742 ~ 12103252 (-)
G113731 NA non-coding downstream 117741 12020953 ~ 12059116 (-)
G113799 NA non-coding upstream 862 12208532 ~ 12208970 (-)
G113806 NA non-coding upstream 21309 12228979 ~ 12229338 (-)
G113810 NA non-coding upstream 146173 12353843 ~ 12356081 (-)
G113828 NA non-coding upstream 148664 12356334 ~ 12356891 (-)
LOC120568043 NA non-coding upstream 377859 12585529 ~ 12600592 (-)
LOC120567758 NA other downstream 1287905 10887007 ~ 10888952 (-)
brinp2 brinp2,LOC103369811 other downstream 1909779 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 2666360 9400787 ~ 9510497 (-)
chd7 chd7,LOC103370133,LOC102782711 other downstream 2981985 9114384 ~ 9194872 (-)
G113070 NA other downstream 3386815 8780452 ~ 8790042 (-)
G113805 NA other upstream 10392 12218062 ~ 12218267 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other upstream 393510 12601180 ~ 12608569 (-)
LOC120568934 LOC104956577 other upstream 553078 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 758796 12966466 ~ 12975328 (-)
G114152 NA other upstream 876891 13084561 ~ 13088563 (-)

Expression


Co-expression Network