fem1a (LOC103364373,LOC104929636,LOC107384124,LOC104958134,LOC100699443)


Basic Information

Item Value
gene id fem1a
gene name LOC103364373,LOC104929636,LOC107384124,LOC104958134,LOC100699443
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27546546 ~ 27548620 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816554.1
GCCATCTTGACAGCAACCTCAAAATGGCAGAAAGCTGTGAGCTAGTAACCGAGTCCGAACTAAGATACCTGCTCcctgctatttaaaaaaaaacacagactcgTCAGTTTTTCCATAAACGAGTGGTTATGGGGTTGGTGCCCTGCGCGGCAGCACAGAGCCTGTAAAATGGATATACCGACGGCGGTTTTCAACGCGGCCAGAGATGGTAAGCTGAAACTTATCCAGAAGTTGCTGAGCAACAAAACTCCCGAGGAGCTGGAGGCTTTAGCCGAGGAGAAAACACAGGGAGGCACCCCGCTGTTGATAGCATCTCGATACGGACATCTAGAGGTTGTAGACTACCTCCTTGAACATTGTAAAGCAAATGTTGAACTCGGGGGGGCGGTTAACTTTGACGGCGAGACCATCGAGGGGGCTCCGCCGCTGTGGGCAGCTTCGGCAGCCGGTCACCTCCCTGTGGTTAAGACGCTACTGAAACACGGTGCCTCGGTGAACAACGCAACCCTCACTAACTCAACGCCGCTCCGAGCTGCCTGCTTCGACGGTCACCTGGAGATCGTCCGCTACCTGGTGGAGCACAGAGCCGACATGGAGGTAGCCAACCGCCACGGCCACACCTGCCTCATGATCTCCTGTTACAAGGGCCACAAGGAGATAGCCAAGTTCCTCCTGGACCGTGGCGCCGACGTCAACCGCAAGAGTGTAAAAGGAAACACCGCCCTCCATGACTGTGCGGAGTCAGGTAGCCTGGACATCATGAAGATGCTGCTAAAGTGCAACGCTCGCATGGAGAGGGATGGATACGGAATGACCCCGCTCCTCGCTGCAAGTGTAACCGGTCACACCAACATCGTGGAGTATCTCGCCCACCAGCCTCGCACCTCCAGAGAGGAACGCGTCGATGCACTTGAACTCCTTGGGGCTACTTTTGTGGATAAAAAGCGGGATCTCTTGGGGGCAATGAGGTACTGGAGAAGGGCCATGGAGCTGAGGCAACCGGGGGACAAAGCTGGATTCCTGGCCAAGCCTGCGCCTGGCCCTCCTATCCCTGCCTATGGCTGTGCACAGGAGGTAAGCACCGCAGAGGAACTGGAAGCTCTGATCACAGACCCTGATGAAATGAGGATGCAGGCTTTGTTGGTTCGAGAGCGCATCCTAGGGCCGTCCCACCCAGACACCTCTTATTACATCCGCTACAGGGGAGCTGTGTACGCTGACTCGGGCAACTTTGAACGCTGCATCAGCCTGTGGAAATATGCTTTAGACATGCAGCAGAGCAACCTGGACCCTCTCAGTCCCATGACAGCCTCCAGTTTCCTGTCCTTTGCAGAGcttttctcttttgttcttCAAGACCGGGCCAAAGGCACCCTATCGACGCGCGTCACCTTTCATGATCTGATGACCGTGCTGGGGAAAAGCGTGAGGGAGGTAGAGCGAGCTGTGGCGCAGAGGGACAACCCTCCAGAGGCTCCTCAGTTCACCAAAGCTCTCTCCATCATCCTGCACCTCATCTTCCTCCTGGAGAAGCTGGAGTGCAGCCCGGAGCAGGAGCATCAGAAGAAGCACACGGTGTACCGCCTGCTGAAGCTGAACCCTCGAGGTCGGAGCGGCTTCACTCCTCTCCACATGGCTGTAGACAAGGAGACCACGTCCGTCGGCCGCTACCCTGTCGGCCGCTTCCCCTCCCAGGCGGTGGCCGCGCTGCTCCTAGAGTGCGGCGCGGACGTCGATTCACGCGACAGTGAAAACAATACGCCGCTGCACATCGCTGCTAACAATGGCTGTCCAGAGATCATGGCGCTACTTATGAAGGCTGGGGCTCACTTTGACGCCACAAATGCACAGAGGAAGACCGCCTACAAGCTGCTGGACGAGCAGAGCACCGGGCAGCCGGCCCTCTACCCACTGAACTATATCACCCTTCAGTGCCTGGCGGCGCGTGCAATTGAAAAGCACAGACTGCCCTACAGGGGACTCATTTCTGAGGAGATGGAGGCTTTCATTGAACTGCACTGACTTCCACTACTGTCCCCTGTTGAGGCTCCCCTGCACTACTCTTCCTGTCCCCC

Function

NR:

description
PREDICTED: protein fem-1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816554.1 True 2075 mRNA 0.57 1 27546546 27548620

Neighbor

gene id symbol gene type direction distance location
LOC120568140 LOC103364374 coding downstream 4579 27455416 ~ 27541967 (-)
LOC120568101 NA coding downstream 92093 27442146 ~ 27454453 (-)
LOC120568100 LOC103364377,LOC100710107,LOC102776083,LOC107384130,LOC103151230 coding downstream 113616 27399446 ~ 27432930 (-)
LOC120567870 LOC104929640,LOC103364379 coding downstream 164931 27363553 ~ 27381615 (-)
LOC120567871 sh3gl1 coding downstream 186225 27344562 ~ 27360321 (-)
LOC120567816 LOC107100918,LOC104958144,LOC103364372 coding upstream 4340 27552960 ~ 27556009 (-)
LOC120568372 NA coding upstream 164718 27713338 ~ 27714419 (-)
LOC120568371 NA coding upstream 168778 27717398 ~ 27720152 (-)
LOC120567657 LOC103372265,LOC100712512,LOC102781040,LOC102296248,LOC101472093,LOC102204333 coding upstream 479399 28028019 ~ 28041959 (-)
LOC120567656 LOC103372825,LOC100689894,LOC106526166,LOC108239540 coding upstream 493497 28042117 ~ 28077515 (-)
G118401 NA non-coding downstream 251246 27294283 ~ 27295300 (-)
G118339 NA non-coding downstream 346857 27198582 ~ 27199689 (-)
G118337 NA non-coding downstream 348898 27174552 ~ 27197648 (-)
G118482 NA non-coding upstream 30348 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 53781 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 79266 27627886 ~ 27664712 (-)
G118608 LOC103372824 non-coding upstream 546403 28095023 ~ 28099810 (-)
G118613 NA non-coding upstream 595808 28144428 ~ 28145034 (-)
cirbpa cirbp other downstream 721976 26819838 ~ 26824570 (-)
G118175 NA other downstream 880594 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 1226951 26315770 ~ 26319595 (-)
G117732 NA other downstream 2623228 24922203 ~ 24923318 (-)
G117560 NA other downstream 3010050 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 94707 27643327 ~ 27675360 (-)
G118524 NA other upstream 164847 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 597651 28146271 ~ 28152770 (-)
G118764 NA other upstream 1437471 28986091 ~ 28986319 (-)
G118856 NA other upstream 1871759 29420379 ~ 29420652 (-)

Expression


Co-expression Network