eif2b3 (eif2b3)


Basic Information

Item Value
gene id eif2b3
gene name eif2b3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24759165 ~ 24797248 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816559.1
GTAGTTTCCTACACGGACGCATTTCACTGAAAGCACCCTGGTGTCATCATACTATGCTAGCCGTTAGGTTTTAAAACGTAACCGTTTTCAAAATATTAAAcgagtaatttatttttttcacagacACTTATCCGAGTGGGTGTTTGCTTTTCAAAAAACGTGTCTAGCTGCTCGTGAGCTGTCTTTGAAGCAGCGGTATCGTTTGCTGCTCTGTGATTATCGTTAGCTAAGTGCTAACAACAGTGACAGCAACTAACTTTACATGCGTCTACCGTTGCTGTCATTTCAAGTGGCAGCGGATCAACAGGGACCAGTGACAGCCTTCACCAGCAGACATCATGGAGCTCCAGGCGGTGTTGATGGCGGCTGGTGGGGGTTCTCGTATGACTGATCTGACATACAACACCCCCAAACCAATGCTGCCTGTCGGCAACAAGCCCCTCATGTGGTACCCGCTTAACTTGCTGGAGAGGGTGGGCTTTGAAGAGGTGATAGTGATCACCACCAAAGAGGTCCAGAAGATGATGGTAGCAGACCCTAAAATGAAGATAGACGTGAAGATGAAACTGGATGTGGTTTGCATCCAGGAAGATGGAGACATGGGCACTGCAGACGCTCTCAGACACATCCAGCAGAAGATCaagACGGACGTCCTGGTGGTGAGCTGTGACCTGATAACAGATGTGGCGCTTCACGAGGTGGTTGATCTTTTCAGAGCCCACAATGCAACACTGGCCATGCTAATGAGCAATGCCCATGAATTCACAGAGACAGTCCCAGGCCAGAAGGGCAAGAAAAAGACAGCTGAACAGAGAGACTTTGTCGGAGTGGATCAGTCAGGGAAGAGGCTGCTGTTCATGGCCAATGAGGCAGATCTGGAAGACGGGCTATCAATTAGGAAGTCTATCATGAGGACACATCCCAGGATGCACATCAAAACAGGCCTTGTGGACGCTCACCTCTACTGTCTGAAAAAAGCAGTGGTGGACTTTCTCGCTGACAACAAGTCTATCTCTTCAATCCGTGGTGAGTTGGTACCATATTTGGTGCGGAAGCAGTTTTCCAAAACAACCAACAGTCCGAAAATCAAAGACGATGCAGAGAATCAGAACCAGAAAACAAATGACGGCTCTACAAACCACGAGCTCCTCATCTCATCACGAGACGAGTCTCTCCTCCAGCTGGCCCAGGAGCGCTCGTGTTGGAACGACCACCGCGGTGACATGAGCGAGGCTTACCATGGAGGAAAGCTGCGCTGCTATGTTCACATTATTGACCAGGGCCTTTGCTGCCGCGTCAACACTTTAGCTGCATACATAGAAGCAAACCGACTGGCCCCGAAGCTGTTTGAGGAGCCAGCAGTTCACCCATCAGCTGTCATTTCTGAGCGATGTCAGATGGGATCAGACAGTATCATCGGAGCACTGTGCCAGGTAGCAGATAAGACTTCCATAAAGAGGTCCACCCTCGGAAACTCCACCACTGTAAAAGAGAAGGTCAAAGTCACTAACTCTATCATCATGCATGGTGTTACCATCGAGGAGGGGTGTAATATCCAGGGCAGCGTGATCTGCAGTAATGCTGTCATAGGCCGAGGAGCAGACCTCAAATACTGCCTGGTGGGAAACGGACAACGGATCGAACCAGAGGCTGAGAGGACTAACGAGGTCATTGTTGGAACGGACCAGCTGATGGAGATCTAGAGAGTGGCATCattaaccaatcagagagcagcaaAACACAGCGGACAGCTTATTCATTGGCTGACTGGCCAATCAGAAGCCTGGATGCTGCTTGACTGTTCTACACTCTCTTCTCAAAGGCTCTTTTGTACATTGTGTCCAAATAAAGACAAGTGCTTAAACCCATT

Function

symbol description
eif2b3 Predicted to enable guanyl-nucleotide exchange factor activity and translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to act upstream of or within translational initiation. Predicted to be part of eukaryotic translation initiation factor 2B complex and guanyl-nucleotide exchange factor complex. Is expressed in eye and gut. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B3 (eukaryotic translation initiation factor 2B subunit gamma).

NR:

description
translation initiation factor eIF-2B subunit gamma

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K03241 EIF2B3; translation initiation factor eIF-2B subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816559.1 True 1870 mRNA 0.49 12 24759165 24797248

Neighbor

gene id symbol gene type direction distance location
plk3 plk3 coding upstream 73586 24676983 ~ 24685579 (+)
mrps14 mrps14,LOC101476193 coding upstream 97101 24660132 ~ 24662064 (+)
tnr tnr coding upstream 213405 24374289 ~ 24545760 (+)
LOC120568202 NA coding upstream 481087 24269684 ~ 24278078 (+)
LOC120568201 NA coding upstream 491879 24259463 ~ 24267286 (+)
ptch2 ptch2 coding downstream 10996 24808244 ~ 24837694 (+)
kif2c kif2c,LOC101470919 coding downstream 56546 24853794 ~ 24861945 (+)
LOC120568223 NA coding downstream 77753 24875001 ~ 24876959 (+)
LOC120568221 NA coding downstream 90513 24887761 ~ 24892439 (+)
zgc:153615 schip1,LOC104951462,LOC103396042,LOC100710109,LOC101472499 coding downstream 97307 24894555 ~ 24906946 (+)
G117547 NA non-coding upstream 202508 24556419 ~ 24556657 (+)
LOC120568139 NA non-coding upstream 419909 24337693 ~ 24339256 (+)
G117523 NA non-coding upstream 500334 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 589212 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 589610 24164854 ~ 24169555 (+)
G117632 NA non-coding downstream 40708 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 320983 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 328583 25125831 ~ 25130929 (+)
LOC120568901 NA non-coding downstream 984927 25782175 ~ 25793191 (+)
LOC120568900 NA non-coding downstream 1075081 25872329 ~ 25873402 (+)
LOC120569045 cacybp other upstream 83411 24667879 ~ 24675754 (+)
LOC120568789 kiaa0040,LOC102782613 other upstream 180853 24569528 ~ 24578312 (+)
LOC120569114 NA other upstream 704461 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 735506 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 844667 23912664 ~ 23914498 (+)
selenot1a selenot,LOC103365166 other downstream 65748 24862996 ~ 24870087 (+)
G117664 NA other downstream 153320 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 190251 24987499 ~ 25044057 (+)
LOC120568894 LOC102789372,LOC104966552 other downstream 946079 25743327 ~ 25773468 (+)
LOC120568895 NA other downstream 976529 25773777 ~ 25793954 (+)

Expression


Co-expression Network