gpaa1


Basic Information

Item Value
gene id gpaa1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22204495 ~ 22210738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816573.1
gttttttgaccGGAAGTCAGTCCGCCGCATAATGTTACCGCAGGAACAAGGAAATTGAAAGCGTTTAGCAGCGGTTGATCAGCCCACCTCTGCAGGTGGATGTCACACTGGAAACGGGTTCCAGTGTATCCAAGCTTTACGTTACAACGGACAACAACATGGGACTGCTGTCTGACCCAAACAGGAGACGGGCTTTGATCAGCCTGCTAACCCGCCTCAATGCCCCAATCTGTGTGGTCTGCTACATGGCTGGTGTGGCCTGGTTCATGGGGTTAGCATTTGAGCCTTTCACTCTGCGGACATACATGTCAGAGAATGCCATGGGGTCTACCATGGTGGAGGAGCGCTTCCCAGCAGGGGAGAGGGCGCTGGCCACGGGCAGAGAGTTTTCAGCTCATAAGAAGAAAGCAGGTGGGATGCCAGTGGACTGGCTGGTAAAGACCATGCAGGCTCGAGGGCTGGAGGTGTTTGCCCAGAGGTTCTCTCGCACGCTGCCCTTCCCTGATGAAAACAAAGAGAGATATCTGGTAAAAGGCACAAATGTATATGGGATCCTCCGGGCCCCTAGAGCTCCGCGGACTGAAGCCCTGGTGCTGAGTGCCCCCTGCACCCCAGGCGATAACAACAACCAGGCAGTGGGGCTGCTACTTGGCTTGGCACAGTACTTCAGGAACCAGGTTTACTGGGCCAAGGACATCATCTTCCTTGTGAATGAGCATGATCTAATTGGTATGCAGGCCTGGCTGGAGGGCTACCACCATACCAACACTACAGGTATGGACTGGTCTCCACTTCAAGGTCGCGGTGGTTCGATTCAGGCAGCTCTGTCCCTGGAGCTCAGCAGCGATGTCATCACCAGTTTGGACCTGGTACTGGAAGGCCTCAACGGCCAGCTCCCCAACCTGGATTTAGCCAACCTCTTCTATGCCTTCTGTCAGAAGATCGGAGTCCTTTGCACCATCCAGGGCAAGctgcagAGGAATGACTGGGACAGTGTGTCTGGCTACAGCCACTCAGTCCAGACCATGATGCTGATGGTGATGAAGCAGGCCAGTGGGCGGCCCTGGGGGGATCATGGCCTTTTCCTGAGATACCACATTGAGGCTGCCACCATCAAGGGAATCAACAGTTTCCGTCAGTACAAGACTGACACCACCACCATTGGAAGGCTTCTAGAGGGAATGTATCGTAAGCTGAATAACCTCCTAGAGCGCCTACACCAGTCCTACTTCTTCTACCTCATGCCGTCCCTCTCTCACTTTGTCTCCATTGGTTACTACATGCCAGCCTTCGGCCTCCTTGCTGTCATCCTGCTGCTTCGTGCCTTAGACCTGTGGGTTCAACTTGCGACTCCACCACCAAGAACAGAAGATGGAGTCGCTGACACCGAGCAGATGTCCAGTCCAGGAGTGCTGTCAGTGCTGACTCCTCTGGTGATCAGCCATCTTACTGGAGTGGCTCTGTACACGCTGCCCATCGGTTTTCAGGAGGTGGCTGTGGAACACTTCCCGGTGTCGGAGACCGAGGCTGTGGTCCTGACAGCGATTGCTGTTTACACAGCAGGCCTGGCTTTGCCTCATAACACACACAGGCTCCTGTCTGGCGAGGGCACGGAGCAGGGCTGGAAAGTGCTGAAGCTGGTGGCTGTGCTGTACCTGGCTGTGCTGCTGGGTTGCACCGCCCTCATCAACTTCTCCCTGGGCTTCATCCTGGCTCTCACCCTGGTGCCCGTGGCTGCCTTCGTCACACCCCACGTACCAAAGGTTCTATCAGCCTTTATCCTGGTCATCCTCAGCCCAGCCTGCACACTCCTCTTTTCGGTCTTTTTCTTCCAAGAGCTGCAGGAAATGCCCGTCAGCTTCATTGACGGTTGGATGCTCTTCCTATCGGTCATCTCGCAGGGCATCCTGGACCACTCCCTGTACGGCTCTCTGGTTTACCCGCTCATAGCCCTGCTGGTCTATCCTTGCTGGCTGCTTTTCTGGAACATCCTCTTCTGGAAATAAATGCCAAGTCATA

Function

NR:

description
glycosylphosphatidylinositol anchor attachment 1 protein-like

GO:

id name namespace
GO:0042765 GPI-anchor transamidase complex cellular_component

KEGG:

id description
K05289 GAA1; GPI-anchor transamidase subunit GAA1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816573.1 True 2019 mRNA 0.55 13 22204495 22210738

Neighbor

gene id symbol gene type direction distance location
exosc4 exosc4 coding upstream 302 22201552 ~ 22204193 (+)
prkacbb LOC102779523,LOC103396312,LOC107383895,LOC108239664,LOC105935432,LOC104931534,LOC100699977,LOC101066292 coding upstream 3847 22189167 ~ 22200648 (+)
LOC120568357 LOC103364114 coding upstream 52882 22066014 ~ 22151613 (+)
znf830 znf830 coding upstream 187188 22015922 ~ 22017307 (+)
LOC120568175 LOC104935914,LOC104955993,LOC103364110,LOC100699175,LOC102214823 coding upstream 201631 21995600 ~ 22002864 (+)
LOC120568851 NA coding downstream 9970 22220708 ~ 22226126 (+)
LOC120568797 NA coding downstream 46470 22257208 ~ 22268559 (+)
ripk1l LOC103479635 coding downstream 277099 22487837 ~ 22495325 (+)
mep1bb mep1b coding downstream 305540 22516278 ~ 22524115 (+)
LOC120567970 NA coding downstream 412791 22623529 ~ 22632195 (+)
LOC120568180 NA non-coding upstream 167545 22025113 ~ 22036950 (+)
G116857 NA non-coding upstream 184217 21935519 ~ 22020278 (+)
G116794 mapre2 non-coding upstream 365743 21834466 ~ 21838752 (+)
G116746 NA non-coding upstream 542025 21614100 ~ 21662470 (+)
G116723 NA non-coding upstream 704101 21454330 ~ 21500394 (+)
LOC120568856 NA non-coding downstream 24081 22234819 ~ 22238505 (+)
LOC120568744 NA non-coding downstream 97029 22307767 ~ 22314947 (+)
G116978 NA non-coding downstream 254597 22465335 ~ 22472840 (+)
G117077 NA non-coding downstream 536382 22747120 ~ 22747732 (+)
G117082 dsp non-coding downstream 541514 22752252 ~ 22754490 (+)
LOC120568354 NA other upstream 307104 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 1289173 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1828862 20373227 ~ 20375633 (+)
emilin2a NA other upstream 2739114 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 3152253 19017039 ~ 19052242 (+)
LOC120567968 NA other downstream 397311 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 430772 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 1222887 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 1381994 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 1640141 23850879 ~ 23855157 (+)

Expression


Co-expression Network