LOC120568851


Basic Information

Item Value
gene id LOC120568851
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22220708 ~ 22226126 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816575.1
CTTTTATTTATGTCCGTAGAGAAACTTGGCCGTGAAACATCCGGCCACAATATAGCGCTTCTCGAAAGAATATAAAAGAAATCTACATGCAATAATTGAACTTGCAGCAAGTTGGCAAGCTCAACACAGTTTATCTCAGCACAGCCGGTGGTCTGATAGAAGTGAAGAGGAATTACAGAAGTGAATGTCCTGCAGGAGATCATTCCAAATGTGAAGAACATGAAGCAGTTAGTCTTGGCCAGACGAGCAAGCCAGATCAAGGTAGAGCTCACACagAGAGTGAGAAAGCCATACAAAGAAGTGATAGATGTCTCCTGGGGCGACCCACACAAGGCAGGTGTGAAGCCTCTTTCATTTGTCcgacagGTTATTGCAGCATGTCTTTACCCTCAGCTTCTGAACAGCGACAGACTGCCAGTGGACGTCAGGCAGAGGGCTCAGAGTCTGCTTAAGGGATGTGATGGAGGTAGTGTAGGCTCTTATACTGCAACAAGGGGTATATCAGAAATAGTCCACAGAGTCTCTGAATTCATAACGAGACGAGATGGCGGGGCTCCATCTTACCCTGAAAACATATTCATCAGCCCCGGCTCACAGTGGGCACTCCGGAACATTCTCAACGTCTTGGTGAACAGTGAGGCTTCACACAGAACAGGTGTGCTGACTCCCATGCCATGCTACTCCGTTTCCCTTATGTCCATAAGGGGGCTAGGAGCAGTTACCGTTCCCTACAACCTCAGGGAGGAGCAGGGCTGGGAGCTGCAGGTGGAGGAGCTGCACAGAGCACTGGAATCTGCAAAGGGAGTCTGCGACCCTGTAGCTCTGTATGTCATCAACCCTGGAAACCCTGCAGGTTATGTTCAAAGCAGGAAATCAATTCAAGAGGTGATCCAGTTCGTTTCAGAGAAGAGGCTCTTTCTTCTGGCTGATGAGGTCTATCAGGACTGTGTTCATGGGGAAAATAGTGAGTTTGTCTCTTACAAAAGGGTTCTGGCTGAGATGGGTCCTCCTCTTTCAGACACAGTGGAGCTGGCGTCCTTTCACTCAGCATCGAAAGGCTTCCTGGGAGAGTGTGGTCTGCGTGGTGGATACGTGGAGCTGGTAAATCTGGACCCCGCTGTTAAGAAATACATCTACAAACTGTTCTCGACAGATGCCTGTGCACCTGTGTTGGGTCAGTTTGCCCTGGATCTGATGATGAAACCTCCACAACCAGGAGATCCCTCATACCCACTTTATAGTGTGGAGACACAACACATCAGGACCGCACTGGTTCATAATGTAAAGAGAGTCCTTGAGGTAGTAAACAATCTGCCAGGTTTCTGCTGTCAGCCAGTGAAAGGAGCATTTGTGTTCCCCAGACTGCATCTTCCACCTAAAGCCATTCAGAAGGCCAAGGAAATGGGAATGCAACCAGATGCATTCTACTGTATTAGACTTCTAGAGGAGGCTAGTGTGATTGTCAGTCCTGGTTGTGACTATGGACAAAAGGAGGGCACCCACCACATCAGaTTTCACATTATGACCCCTGAGGACACGATGGAGGAAGTACTGAGACGCCTGTCTAGCTTTCACACACAGTTTATGAAGGATTTTTCCTAAGCACGTTTGTAAAATGagttattttc

Function

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816575.1 True 1628 mRNA 0.48 12 22220708 22226126

Neighbor

gene id symbol gene type direction distance location
gpaa1 NA coding upstream 9970 22204495 ~ 22210738 (+)
exosc4 exosc4 coding upstream 16515 22201552 ~ 22204193 (+)
prkacbb LOC102779523,LOC103396312,LOC107383895,LOC108239664,LOC105935432,LOC104931534,LOC100699977,LOC101066292 coding upstream 20060 22189167 ~ 22200648 (+)
LOC120568357 LOC103364114 coding upstream 69095 22066014 ~ 22151613 (+)
znf830 znf830 coding upstream 203401 22015922 ~ 22017307 (+)
LOC120568797 NA coding downstream 31082 22257208 ~ 22268559 (+)
ripk1l LOC103479635 coding downstream 261711 22487837 ~ 22495325 (+)
mep1bb mep1b coding downstream 290152 22516278 ~ 22524115 (+)
LOC120567970 NA coding downstream 397403 22623529 ~ 22632195 (+)
LOC120569076 LOC103371152,LOC102785856 coding downstream 460968 22687094 ~ 22688773 (+)
LOC120568180 NA non-coding upstream 183758 22025113 ~ 22036950 (+)
G116857 NA non-coding upstream 200430 21935519 ~ 22020278 (+)
G116794 mapre2 non-coding upstream 381956 21834466 ~ 21838752 (+)
G116746 NA non-coding upstream 558238 21614100 ~ 21662470 (+)
G116723 NA non-coding upstream 720314 21454330 ~ 21500394 (+)
LOC120568856 NA non-coding downstream 8693 22234819 ~ 22238505 (+)
LOC120568744 NA non-coding downstream 81641 22307767 ~ 22314947 (+)
G116978 NA non-coding downstream 239209 22465335 ~ 22472840 (+)
G117077 NA non-coding downstream 520994 22747120 ~ 22747732 (+)
G117082 dsp non-coding downstream 526126 22752252 ~ 22754490 (+)
LOC120568354 NA other upstream 323317 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 1305386 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1845075 20373227 ~ 20375633 (+)
emilin2a NA other upstream 2755327 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 3168466 19017039 ~ 19052242 (+)
LOC120567968 NA other downstream 381923 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 415384 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 1207499 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 1366606 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 1624753 23850879 ~ 23855157 (+)

Expression


Co-expression Network