larp6b


Basic Information

Item Value
gene id larp6b
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17972055 ~ 17973556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816604.1
ACTGTATCTAGGCTGCTGCTTTTCCTTAATACCCGTCTTTGCTTCACTAAGAAACAGCACAGCTCTGTGACCTGTTATCACTGTCCTTTGGAGATACCATGAGTAATCCGATTGGAGATGATGCACAATCTGTCCAAGATGAAAAAGACCGTGAGGGTGAATTGCTCTGCTTGAAGATTAAAGCCCAGTTGGAGGATTTGCTCTCCGACAGCCACCTGGCAGAGGACGGCTTCCTGCTGAAACATATGCAGAAGAACAAACAGGGCTATGTCAGTCTCAAGCTCCTCACTTGTTTGAAAAAGATAAAGGTCCTGACCACCAACTGGTACATGACTCTAGCAGGAGCAGAGTACTCAGAACTTCTGGAGGTGAACGATGAATGCACCAAAGTGAGGCGGATACAGCCACTACCCAAATGGCTGCTGTGTTCCCCCACCACCAAGCTCCTCCTCGCCTGGAACCTTTCTGTGGAGAAAACAACTGGAGAAGACGGAACGGCCCTAGACCTGGAGCACACTTTACTCTCAGAGAGGATCCTCCAAAAGTTCAGTACTTTTGGCAACATTATTTCAGTCTGGATCCTGCATCCTGGCAAAGAGCTTCCCAAGGAGCTACAGTGCTATGCCAAGCGTCACAAAGAGCTCAGCCAACATTTGTGTGCAGTGGTGAAGTTTGATCATTTGGAGGAAGTTCGTAAGGCCTACAACGCCCTGAAAGCAGAAGAGGAGAAGTCTAACGGTGAGGGCATGTGTGTGGTACCTTTGGGATTCCAGTCAACGCACCAAGTGGCCAAGGACGGACCAtcagaggaaaacaaaaaggaCCAACCTGAGGACACACCTTCCCAGGAAAATCCACTTGAAACCTCAGGGGATTCCGTCCAGGAGGAACCCTCTGCGCCACTTAAAGTTTCTGACAAGACTTCAGACACATCTCAGCCCCAAACGTCCATGCAAAAAACCTTTGAGCAGATCTCCACCAGCTGTAACAGCCAGTCCCTCTCCGGTTTGAATCAGAGGTACAGTAAGACCAGCTGGTGCTCTGGAGACTGTGATAAAGAGAATTCTCGGAGCCCCTGGGTGCTGAGGCGCAAATTTGCAGCCAGTGTATTAAACCCCAAGGTGGCTCGGCACGTGAAGGCGCCCTGCTTAGTGCTGCGTCAGCCCTTCGGCCCTGATGGCACCAAGGGCTTTCAGAGCAGAGGGAAGCTGCTGCAGCACGAAGAGCTCAAATTCTCCCCTGGAAGTTGTAACACCACAAGTGCTCAGTAACAGTTTTGAGATAGCAGATAACAGATTT

Function

NR:

description
la-related protein 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816604.1 True 1299 mRNA 0.50 3 17972055 17973556

Neighbor

gene id symbol gene type direction distance location
LOC120567749 LOC103353067 coding upstream 4362 17787785 ~ 17967693 (+)
tceanc2 tceanc2 coding upstream 388294 17580659 ~ 17583761 (+)
lrrc42 lrrc42 coding upstream 397582 17571577 ~ 17574473 (+)
dcaf8 dcaf8,LOC102795666 coding upstream 419125 17543670 ~ 17552930 (+)
amy2a NA coding upstream 646396 17317113 ~ 17325659 (+)
LOC120569107 nrtn,LOC103353066 coding downstream 2420 17975976 ~ 17985540 (+)
im:7138239 LOC104950317,LOC103353072 coding downstream 62396 18035952 ~ 18041729 (+)
LOC120567609 LOC103353062,LOC104950308 coding downstream 69841 18043397 ~ 18045228 (+)
cib3 cib3,LOC107687907 coding downstream 74510 18048066 ~ 18052429 (+)
ap1m1 ap1m1,LOC107696211 coding downstream 101551 18075107 ~ 18090043 (+)
G115585 NA non-coding upstream 4013 17967740 ~ 17968042 (+)
G115516 NA non-coding upstream 392466 17578910 ~ 17579589 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding upstream 406573 17565255 ~ 17565482 (+)
G115506 NA non-coding upstream 412175 17557925 ~ 17559880 (+)
G115488 NA non-coding upstream 487244 17484406 ~ 17484811 (+)
G115599 ranbp3,LOC102787870 non-coding downstream 43007 18016563 ~ 18019614 (+)
G115600 NA non-coding downstream 46349 18019905 ~ 18020110 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding downstream 79312 18052868 ~ 18058243 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding downstream 87153 18060709 ~ 18065238 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding downstream 198123 18171679 ~ 18174071 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 488502 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1359849 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1444373 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1743504 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 2050524 15865586 ~ 15921531 (+)
LOC120567767 NA other downstream 53724 18027280 ~ 18029895 (+)
G115729 NA other downstream 331593 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 593077 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 686873 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 746809 18720365 ~ 18725447 (+)

Expression


Co-expression Network