LOC120568868


Basic Information

Item Value
gene id LOC120568868
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 9065585 ~ 9070253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816605.1
ATATTTTTAAGTTGATCACATGTATTGTATTTAGCATCTGAATCTGTAGAGTGACCAGTCAAATAATGTAGTGGAGACCCAAAAAGTTCTGTATATCTCACTTAAAAGCACAATGTAGCATACAGTATTATCCTCAGGCACAAGTACCTCAGGAGTACGGGGCAGGACTTGAGTAAAGGGTACTGCACAGAATACAGAACACCATGGTTCTGGTTCTCCATTCTGCTTCTGTTTATGACATGAATAGAATGTGACATCACAGTTATCCTGCTTGTAACCTTCTGACTGCAGACAGTTCATGTCATGTTCATCCACAGTTTATTTCCCATGCCTACCAAGCCATGGACTATTTAAACTCTTTGTTTATCCTCCGCTGATTTCTCATGAAGTTATtCTCAGTCAGCAGCCATGGCTCGACAAAGTGGCCGTTTGAGGTCAATGGGTTACTATGACAACGATGAAGAACCTCGGGTGTTATACAAGGAGAGCCCATTCAGGGTCTTTCGAAAGAAGAGGGGTCGTCGCAATTCTGGAGGCAGCACCGTTTCAAGCAGGTCATGCATATCTTTTGCTGACGATATTTGCCGCCTTCCTCCCAGCAACGGGAGGGGCGAAAACATATCTACGCAATTCAGCCAGACAACTGTTGTCAGCCTCCTCTCCATGATCATAATGTGTTTTGGGGGATGTCTATACAACATGTATGCTTCAAGCAGGACCTGTTTCTGTCTGGGTTCTGGGTGGCCAGAGAACATGGACTGGGCTGGAAACGAGTTGCGGATGATGCAGGTGCAGCTGACAAAGCTGCAGGAAGATATGGTTAGAGCTGACGTTATGGTGATGCAGAAGCAGCTAAAAGAGCTGCAGGAGGACATGGTTGGGGCTGATCTTAAGATGATgcaaaaacagctaaaagagcTGCAGGAGGACATGGTTGGAGCTGATGTTAGGATGATGCAGATGCAGCTAAAAGAGCTGCAGGAGGACATGGGTGCAGCTGATCTTAAGATGATGCGGAAGCAGCTAAAAGAGCTGCAGGAGGAACTGCTCCGCCTGAGGAAGAAGCTTATTCCTATGGCAGACACTATGCCAAACTTTGCTTTAGAATCACAGGGTGCCACTGTCCTTCATCATCTTAGCTCAGACACTTATCACACTCAACCGCCACTTGTTACATTATGGGGGATACCTTTATGGTATCCACCTGCCAACCCCCGGACTGTTATCCAGGGACATTCTTCACTTCTGACTCCTGGTCGCTGCTGGGCCTTTGCAGGTAGACGGGGACATGTATTTATCACCCTGTCCCACCCAGTCACCATCACCCATGTGACACTGGGTCACATTACAAGCATGCAGTCCCCTGCTGGCTTCGCTTACAGTGCTCCAAGAGAGTTTTCTGTCTATgGAGTGAAGAAAGTGGACAGTGAAGCGACCCGCCTAGGAACCTTTGTATATGATCCGAATGGGGAGTCATTACAGACCTTCAAACTCCCTGGTCATAAAAAAGTTGTCTTCAGTTTTGTGAAGTTGCAGATTGAGAGCAACTGGGGTCATCCAGAGTACACCTGTGTGTACAACTTCAGGGTCCACGGAAAGATGCCATAAATGTCTGTAACTGCTTAAAGAATATGGACTCTTCGTTATTTATCagagtaggggtggggggagggctTGGTTGtgactttattttttctttgtatgACCCTCCCAAAAGCTACAAATATTTACCTTGACCCTCCATGTAGAACCTCCCTCAGTGATGCATGGCCCTACCTACACCATAAATAACCATATTTTATTGTACTCACACCAAAAGTTGgtggagaaaataaaaatgattacgATTAATATCGAATCGTGACTCTTAAACCTCTGACCCACCTTCCATCGTTGGAAAAAAGCTAACTACTGGCCTAACTTAATGT
>XM_039816606.1
ATATTTTTAAGTTGATCACATGTATTGTATTTAGCATCTGAATCTGTAGAGTGACCAGTCAAATAATGTAGTGGAGACCCAAAAAGTTCTGTATATCTCACTTAAAAGCACAATGTAGCATACAGTATTATCCTCAGGCACAAGTACCTCAGGAGTACGGGGCAGGACTTGAGTAAAGGGTACTGCACAGAATACAGAACACCATGGTTCTGGTTCTCCATTCTGCTTCTGTTTATGACATGAATAGAATGTGACATCACAGTTATCCTGCTTGTAACCTTCTGACTGCAGACAGTTCATGTCATGTTCATCCACAGTTTATTTCCCATGCCTACCAAGCCATGGACTATTTAAACTCTTTGTTTATCCTCCGCTGATTTCTCATGAAGTTATGTAAtCTCAGTCAGCAGCCATGGCTCGACAAAGTGGCCGTTTGAGGTCAATGGGTTACTATGACAACGATGAAGAACCTCGGGTGTTATACAAGGAGAGCCCATTCAGGGTCTTTCGAAAGAAGAGGGGTCGTCGCAATTCTGGAGGCAGCACCGTTTCAAGCAGGTCATGCATATCTTTTGCTGACGATATTTGCCGCCTTCCTCCCAGCAACGGGAGGGGCGAAAACATATCTACGCAATTCAGCCAGACAACTGTTGTCAGCCTCCTCTCCATGATCATAATGTGTTTTGGGGGATGTCTATACAACATGTATGCTTCAAGCAGGACCTGTTTCTGTCTGGGTTCTGGGTGGCCAGAGAACATGGACTGGGCTGGAAACGAGTTGCGGATGATGCAGGTGCAGCTGACAAAGCTGCAGGAAGATATGGTTAGAGCTGACGTTATGGTGATGCAGAAGCAGCTAAAAGAGCTGCAGGAGGACATGGTTGGGGCTGATCTTAAGATGATgcaaaaacagctaaaagagcTGCAGGAGGACATGGTTGGAGCTGATGTTAGGATGATGCAGATGCAGCTAAAAGAGCTGCAGGAGGACATGGGTGCAGCTGATCTTAAGATGATGCGGAAGCAGCTAAAAGAGCTGCAGGAGGAACTGCTCCGCCTGAGGAAGAAGCTTATTCCTATGGCAGACACTATGCCAAACTTTGCTTTAGAATCACAGGGTGCCACTGTCCTTCATCATCTTAGCTCAGACACTTATCACACTCAACCGCCACTTGTTACATTATGGGGGATACCTTTATGGTATCCACCTGCCAACCCCCGGACTGTTATCCAGGGACATTCTTCACTTCTGACTCCTGGTCGCTGCTGGGCCTTTGCAGGTAGACGGGGACATGTATTTATCACCCTGTCCCACCCAGTCACCATCACCCATGTGACACTGGGTCACATTACAAGCATGCAGTCCCCTGCTGGCTTCGCTTACAGTGCTCCAAGAGAGTTTTCTGTCTATgGAGTGAAGAAAGTGGACAGTGAAGCGACCCGCCTAGGAACCTTTGTATATGATCCGAATGGGGAGTCATTACAGACCTTCAAACTCCCTGGTCATAAAAAAGTTGTCTTCAGTTTTGTGAAGTTGCAGATTGAGAGCAACTGGGGTCATCCAGAGTACACCTGTGTGTACAACTTCAGGGTCCACGGAAAGATGCCATAAATGTCTGTAACTGCTTAAAGAATATGGACTCTTCGTTATTTATCagagtaggggtggggggagggctTGGTTGtgactttattttttctttgtatgACCCTCCCAAAAGCTACAAATATTTACCTTGACCCTCCATGTAGAACCTCCCTCAGTGATGCATGGCCCTACCTACACCATAAATAACCATATTTTATTGTACTCACACCAAAAGTTGgtggagaaaataaaaatgattacgATTAATATCGAATCGTGACTCTTAAACCTCTGACCCACCTTCCATCGTTGGAAAAAAGCTAACTACTGGCCTAACTTAATGT
>XM_039816607.1
ATATTTTTAAGTTGATCACATGTATTGTATTTAGCATCTGAATCTGTAGAGTGACCAGTCAAATAATGTAGTGGAGACCCAAAAAGTTCTGTATATCTCACTTAAAAGCACAATGTAGCATACAGTATTATCCTCAGGCACAAGTACCTCAGGAGTACGGGGCAGGACTTGAGTAAAGGGTACTGCACAGAATACAGAACACCATGGTTCTGGTTCTCCATTCTGCTTCTGTTTATGACATGAATAGAATGTGACATCACAGTTATCCTGCTTGTAACCTTCTGACTGCAGACAGTTCATGTCATGTTCATCCACAGTTTATTTCCCATGCCTACCAAGCCATGGACTATTTAAACTCTTTGTTTATCCTCCGCTGATTTCTCATGAAGTTATtCTCAGTCAGCAGCCATGGCTCGACAAAGTGGCCGTTTGAGGTCAATGGGTTACTATGACAACGATGAAGAACCTCGGGTGTTATACAAGGAGAGCCCATTCAGGGTCTTTCGAAAGAAGAGGGGTCGTCGCAATTCTGGAGGCAGCACCGTTTCAAGCAGGTCATGCATATCTTTTGCTGACGATATTTGCCGCCTTCCTCCCAGCAACGGGAGGGGCGAAAACATATCTACGCAATTCAGCCAGACAACTGTTGTCAGCCTCCTCTCCATGATCATAATGTGTTTTGGGGGATGTCTATACAACATGTATGCTTCAAGCAGGACCTGTTTCTGTCTGGGTTCTGGGTGGCCAGAGAACATGGACTGGGCTGGAAACGAGTTGCGGATGATGCAGGTGCAGCTGACAAAGCTGCAGGAAGATATGGTTAGAGCTGACGTTATGGTGATGCAGAAGCAGCTAAAAGAGCTGCAGGAGGACATGGTTGGGGCTGATCTTAAGATGATgcaaaaacagctaaaagagcTGCAGGAGGACATGGTTGGAGCTGATGTTAGGATGATGCAGATGCAGCTAAAAGAGCTGCAGGAGGACATGGGTGCAGCTGATCTTAAGATGATGCGGAAGCAGCTAAAAGAGCTGCAGGAGGAACTGCTCCGCCTGAGGAAGAAGCTTATTCCTATGGCAGACACTATGCCAAACTTTGCTTTAGAATCACAGGGTGCCACTGTCCTTCATCATCTTAGCTCAGACACTTATCACACTCAACCGCCACTTGTTACATTATGGGGGATACCTTTATGGTATCCACCTGCCAACCCCCGGACTGTTATCCAGGGACATTCTTCACTTCTGACTCCTGGTCGCTGCTGGGCCTTTGCAGGTAGACGGGGACATGTATTTATCACCCTGTCCCACCCAGTCACCATCACCCATGTGACACTGGGTCACATTACAAGCATGCAGTCCCCTGCTGGCTTCGCTTACAGTGCTCCAAGAGAGTTTTCTGTCTATgGAGTGAAGAAAGTGGACAGTGAAGCGACCCGCCTAGGAACCTTTGTATATGATCCGAATGGGGAGTCATTACAGACCTTCAAACTCCCTTTGTCTTCAGTTTTGTGAAGTTGCAGATTGAGAGCAACTGGGGTCATCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816605.1 False 1928 mRNA 0.46 10 9065585 9070253
XM_039816606.1 True 1932 mRNA 0.46 10 9065585 9070253
XM_039816607.1 False 1549 mRNA 0.47 10 9065585 9069887

Neighbor

gene id symbol gene type direction distance location
dpydb dpyd coding upstream 1064 9048166 ~ 9064521 (+)
odr4 LOC103370130,LOC102290351,LOC102783281 coding upstream 28891 9028557 ~ 9036694 (+)
prg4a LOC104954333 coding upstream 69429 8989441 ~ 8996156 (+)
LOC120567618 olfml2b,LOC100693986 coding upstream 109873 8945102 ~ 8955712 (+)
trnan-guu_7 NA coding upstream 171529 8893982 ~ 8894056 (+)
LOC120568720 ptbp2,LOC103370128,LOC106917804,LOC102234855,LOC102779238,LOC105008310,LOC107570490,LOC105910816 coding downstream 1383 9071636 ~ 9093276 (+)
ca8 ca8 coding downstream 165032 9235285 ~ 9256693 (+)
tox tox,LOC106524915,LOC101481153 coding downstream 216900 9287153 ~ 9339618 (+)
LOC120568395 NA coding downstream 289367 9359620 ~ 9426547 (+)
dars2 dars2 coding downstream 440929 9511182 ~ 9521842 (+)
LOC120569003 NA non-coding upstream 19153 9037893 ~ 9046432 (+)
G113148 NA non-coding upstream 55787 9009031 ~ 9009798 (+)
LOC120568741 NA non-coding upstream 95737 8967289 ~ 8969848 (+)
G113131 NA non-coding upstream 108313 8955878 ~ 8957272 (+)
G113092 NA non-coding upstream 238136 8826367 ~ 8827449 (+)
G113240 NA non-coding downstream 82748 9153001 ~ 9162545 (+)
G113273 NA non-coding downstream 187070 9257323 ~ 9257583 (+)
G113274 NA non-coding downstream 199094 9269347 ~ 9269547 (+)
G113290 NA non-coding downstream 304196 9374449 ~ 9375105 (+)
LOC120568401 NA non-coding downstream 397045 9467298 ~ 9469320 (+)
G113130 NA other upstream 63017 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 162738 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 239774 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 256126 8789209 ~ 8809459 (+)
atg10 atg10 other upstream 350314 8708661 ~ 8715271 (+)
LOC120568835 NA other downstream 1815342 10885595 ~ 10886478 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 2262315 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 3052416 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 3087196 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 3512389 12582642 ~ 12599840 (+)

Expression


Co-expression Network