LOC120568873


Basic Information

Item Value
gene id LOC120568873
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20339503 ~ 20347484 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816613.1
ATCAGCAGCGAGAAAATAAGTACGTTACGCTAGAGCGAACCAATCCGGTTCGACCTTGTAAGAGGGGGCACTTCCGTTTGGAGTAGCGTTGTTCACTCGTAACCGACACAAGTAGTAAGAGCTATGTCTCCAGAGGATGAGCTCCTAAGCCCCCCCCTTGGTTTCAGCTCTACCAGGGAGGATGTCACTCTGAGCTGTGGTGATTTAGCTAGCTTTCATGAGCTGGGGAGAAGGAGCAGAGCACGCAGCATCCTGCACACAGAAACCCCAGAGTCTGACATCAGTTGTCATGGAGACTTTGCCTATGGAAAAAGTGCTTTCCTGAAAACACTGATGGATGCAGAAGCAGCTGCCAACTCTGCTGCCATACAACTTGTGTCTTTTAAAGATGCCATTGAAGATGATTTTGCTGATTCGAGACATTTGGCCATTGATAAGCGCAGAATTGCAAGGCAAAGAGGACTTTTGTTGGAGAAGTTGGAGGATTTTAGACGAATAAATAAGTCTGTTCGACAGAAACTGAAACAGCTCCAAGATGTAGAGGCTGATCAAATTGATGCCAACCACCAAACTGACATCTTATTGAAGAAGATCACACAGGCTGAGAGTGAAAATGAGAAATTAAAAAGAGATTTGggtgagacagaaagaaaagttgAAGAACTGATGGATCAGCGGAGAGAAGAGCAGGAGAACATAAAGAGTGCGGTTCACATGACCAAGTCTGTGGAGGCGACTCGTGCTCACCTGCAGGTGCAGTTTCGCAACAAGGAAGCCGAAAACAATCGCCTGACCGTACAGCTACGGactGTGGAGAGAACCCTGATCGAGCAAAAGATGGAGATTGATGATTtgaaaggctccattacctctTTGACTGAGAAGGCAGCGCAGGACAAAGAATGTCTCAAGAAAGCCACCCGAGCACAGAAATTGAGAGCTGAGAGATTTGAAGCTGCTATTGAGAAATGCTATGCGCAATTGAGGGAAAAGGATGCTGAGCTGGCCAACGCCCGTTTAGAAAGAGACTCCAGGAGACGGCAAAAAGAGCGGGAGGAGGATGAGAAAGACAAACTTGTAGCTTATACAGAGTTTTTGAAAAGTCAAATTGCGGACATGACAGCGAGGCTGCAGAAGGAGAAGGACGAGCTCACCGCAGCTAATGAAACTGTGATGCAACGGCTTGAAAAACTCTGCGCTGAAAATGGAGACCTCAACGTCAATAATGCAGCACTCAAGGTATCCATTGCGCAGTTTGAGCAGCAGCTGGCTGATTGTGAGTCCGCCCTGATAGAGGAAAAGGTTGTGTCTCAGGAGAGGAAACATCAGGCCGAACAGTGCCAACATCAGGTTGCAGAGTCTCAAGCTGAGTTAGATGATCTAAGGATAAAATATGCAAATCTTTTAAGAGAGACGGAGAAGACACGAGATGGAAAAGCTACAGAAGTTGAGAAGGTGAGACAGGAGCTGCAGGGGCGTGTGGACGAACTGAAGTCTTACCCTGAGTTACTGAGTGCAGCTGAGCAGAGTCTCTTTGAGTGCCAGGAGAACCTGCGACGCTCGGAGAGGAAGTGCTCAGAAAAGTCAGAGTCCGTTAGGCAACTGCAGGTTAAGATGGAGAGTCAGACACAATTGCTGAGATCATCTGTGGAGATGAAGGAGTCCACCCATGATGCCAATTTACAACTACAGGAGAAAGTGAATTTTCTCCAAAAgaaaaTGGACGAGCTGCAGCTGGAGAACCTGGATCTGGTACGGAGGCTCGCAGCACAGGAGGAAGGTCTGAGCTACAGTAACCGGCAGCTGGAGCTGCGCTCGTTAGACTGCCAGGCCCTCAGCCGGCAGCTGGAGGCAGCTTTATCAGACGTCAAACAACAGGTCAACAAGGTAAAAGACAAGGCTGTTGCCAGAGAAGAGGCTCTTCAGACCAAAATCTTGGAGCTGGCAGCAGACAAGAGCAGAAGGGATAACGAGCTGAGGCTCCTTCGCCAGAGCAAGCTCACCGCAGAGAAACAGTTTGAGGTGCGTCTGAAGGACCTGCAGCTCAGCCTGGACCAATCGGAGAGCCACAAACAAAGCATTCAGAACTACATTGATTTCCTCAAAAACTCTTATACGACAATGTTTGATGAGGGATTGCAAACATCAAGTTTTGGATCATCATATTTTCTAAAATGATTAAGGAtttatttgtattcatttatttattttttgtgtagTGTAATATGTatatgggcttttttttttaaaggaacggAGGCAATAATTTGGTTATTGACGTTCTACATTTAGCTGACAATAATCTGGGACTTTCTTCCCCCagcccccaccccaccccccttgTTGTTGTGCAAggttttaatattgttttttagCTGATGGCCCAAAAAACATTACATGATATTCTCACGTGTGTGCTAATATTAGACTAAGAACTCTTGGTGCTACTGTCTCTTATTACCATACAGCAAATAGCCAGTTACAAAAAAAGACGAGTCTATCTACTTGTTATAGCAACATGTGTGATGAGCTGTGAGTTGGTAACCtaagatttgctgcttttctgtttgtttgttttttatcactttaaatTGAAtacatttgggttttggactgttggtcagataaAACAAGCAATAAAGATGTCACGTTGGGCTCTGAGTAACTGTAACAGGCATGTATTCACTATTTTCTTATGTATCATAgtctaaaataataaatcaaaaacataAAAGGGATTTCCAGCTGGAGAAAAGTAATGTGCCACTAGGTGGAAGTGTTTTGTTAGCCAATCTTTTCTTCTGTCAAGTGTCTCAttttacccacaatgcactgtgCATCAGTCTTACCTAAGTCACTGCTAAATGGGATCCATTCAACATAAAAACGTTCAATGTCTATTGGAAGTGTAAGATTAGGTCTGTCTTTGTGCAACTATCTCCAGAACAAACTGTTGGccatattttaaagctgtaCCTACACCTCATTATTAAAGCAAGTGTTAACCAACACAAGTGGTGCTTGAAAACCAAATGTCAGTGGGTGCCTATGTCCCTGCCATGTTTACCTGTGGTAGAATAAACCACGTTTTCCATCATAAAATATACTCCAACTTTGTTCCCAGTCAAGCCATCATCATTTTTCTATTGTGAATGATATGATGGGGAAATTCGGAACAACACTCAAAATGCTACCTTCACTGTTCAAACGGACACAAGTTTCTATTTCTGTTGTAATAAAGTGTGATATATATTGAATGTGTTTATGTTCTGACTTTCAGCTGGAATGAGATGAATAATGCAGAAAATCAATTATGTAGCTGCCAGTTGTGAAGCTCATGCCTTTCGGGCTTCAAACATAATTACTGAAATGCGTGCAACACTGGGACATTTCCAAACCACTTTAAAATCTGTTGCTGGTTGATCTCATGCTTTTGTAATGGAAGTTTTTATATTATTGAAGCATAGAAGCACACGAGAACACAGATATCTGCTGCAGTATCATTTACCTAACAACTGAACTATGTCTTGTACTGTACCCATACTGTATCTATGGCAATAAACTACTAGACCTGA
>XM_039816614.1
ATCAGCAGCGAGAAAATAAGTACGTTACGCTAGAGCGAACCAATCCGGTTCGACCTTGTAAGAGGGGGCACTTCCGTTTGGAGTAGCGTTGTTCACTCGTAACCGACACAAGTAGTAAGAGCTATGTCTCCAGAGGATGAGCTCCTAAGCCCCCCCCTTGGTTTCAGCTCTACCAGGGAGGATGTCACTCTGAGCTGTGGTGATTTAGCTAGCTTTCATGAGCTGGGGAGAAGGAGCAGAGCACGCAGCATCCTGCACACAGAAACCCCAGAGTCTGACATCAGTTGTCATGGAGACTTTGCCTATGGAAAAAGTGCTTTCCTGAAAACACTGATGGATGCAGAAGCAGCTGCCAACTCTGCTGCCATACAACTTGTGTCTTTTAAAGATGCCATTGAAGATGATTTTGCTGATTCGAGACATTTGGCCATTGATAAGCGCAGAATTGCAAGGCAAAGAGGACTTTTGTTGGAGAAGTTGGAGGATTTTAGACGAATAAATAAGTCTGTTCGACAGAAACTGAAACAGCTCCAAGATGTAGAGGCTGATCAAATTGATGCCAACCACCAAACTGACATCTTATTGAAGAAGATCACACAGGCTGAGAGTGAAAATGAGAAATTAAAAAGAGATTTGggtgagacagaaagaaaagttgAAGAACTGATGGATCAGCGGAGAGAAGAGCAGGAGAACATAAAGAGTGCGGTTCACATGACCAAGTCTGTGGAGGCGACTCGTGCTCACCTGCAGGTGCAGTTTCGCAACAAGGAAGCCGAAAACAATCGCCTGACCGTACAGCTACGGactGTGGAGAGAACCCTGATCGAGCAAAAGATGGAGATTGATGATTtgaaaggctccattacctctTTGACTGAGAAGGCAGCGCAGGACAAAGAATGTCTCAAGAAAGCCACCCGAGCACAGAAATTGAGAGCTGAGAGATTTGAAGCTGCTATTGAGAAATGCTATGCGCAATTGAGGGAAAAGGATGCTGAGCTGGCCAACGCCCGTTTAGAAAGAGACTCCAGGAGACGGCAAAAAGAGCGGGAGGAGGATGAGAAAGACAAACTTGTAGCTTATACAGAGTTTTTGAAAAGTCAAATTGCGGACATGACAGCGAGGCTGCAGAAGGAGAAGGACGAGCTCACCGCAGCTAATGAAACTGTGATGCAACGGCTTGAAAAACTCTGCGCTGAAAATGGAGACCTCAACGTCAATAATGCAGCACTCAAGGTATCCATTGCGCAGTTTGAGCAGCAGCTGGCTGATTGTGAGTCCGCCCTGATAGAGGAAAAGGTTGTGTCTCAGGAGAGGAAACATCAGGCCGAACAGTGCCAACATCAGGTTGCAGAGTCTCAAGCTGAGTTAGATGATCTAAGGATAAAATATGCAAATCTTTTAAGAGAGACGGAGAAGACACGAGATGGAAAAGCTACAGAAGTTGAGAAGATGGAGAGTCAGACACAATTGCTGAGATCATCTGTGGAGATGAAGGAGTCCACCCATGATGCCAATTTACAACTACAGGAGAAAGTGAATTTTCTCCAAAAgaaaaTGGACGAGCTGCAGCTGGAGAACCTGGATCTGGTACGGAGGCTCGCAGCACAGGAGGAAGGTCTGAGCTACAGTAACCGGCAGCTGGAGCTGCGCTCGTTAGACTGCCAGGCCCTCAGCCGGCAGCTGGAGGCAGCTTTATCAGACGTCAAACAACAGGTCAACAAGGTAAAAGACAAGGCTGTTGCCAGAGAAGAGGCTCTTCAGACCAAAATCTTGGAGCTGGCAGCAGACAAGAGCAGAAGGGATAACGAGCTGAGGCTCCTTCGCCAGAGCAAGCTCACCGCAGAGAAACAGTTTGAGGTGCGTCTGAAGGACCTGCAGCTCAGCCTGGACCAATCGGAGAGCCACAAACAAAGCATTCAGAACTACATTGATTTCCTCAAAAACTCTTATACGACAATGTTTGATGAGGGATTGCAAACATCAAGTTTTGGATCATCATATTTTCTAAAATGATTAAGGAtttatttgtattcatttatttattttttgtgtagTGTAATATGTatatgggcttttttttttaaaggaacggAGGCAATAATTTGGTTATTGACGTTCTACATTTAGCTGACAATAATCTGGGACTTTCTTCCCCCagcccccaccccaccccccttgTTGTTGTGCAAggttttaatattgttttttagCTGATGGCCCAAAAAACATTACATGATATTCTCACGTGTGTGCTAATATTAGACTAAGAACTCTTGGTGCTACTGTCTCTTATTACCATACAGCAAATAGCCAGTTACAAAAAAAGACGAGTCTATCTACTTGTTATAGCAACATGTGTGATGAGCTGTGAGTTGGTAACCtaagatttgctgcttttctgtttgtttgttttttatcactttaaatTGAAtacatttgggttttggactgttggtcagataaAACAAGCAATAAAGATGTCACGTTGGGCTCTGAGTAACTGTAACAGGCATGTATTCACTATTTTCTTATGTATCATAgtctaaaataataaatcaaaaacataAAAGGGATTTCCAGCTGGAGAAAAGTAATGTGCCACTAGGTGGAAGTGTTTTGTTAGCCAATCTTTTCTTCTGTCAAGTGTCTCAttttacccacaatgcactgtgCATCAGTCTTACCTAAGTCACTGCTAAATGGGATCCATTCAACATAAAAACGTTCAATGTCTATTGGAAGTGTAAGATTAGGTCTGTCTTTGTGCAACTATCTCCAGAACAAACTGTTGGccatattttaaagctgtaCCTACACCTCATTATTAAAGCAAGTGTTAACCAACACAAGTGGTGCTTGAAAACCAAATGTCAGTGGGTGCCTATGTCCCTGCCATGTTTACCTGTGGTAGAATAAACCACGTTTTCCATCATAAAATATACTCCAACTTTGTTCCCAGTCAAGCCATCATCATTTTTCTATTGTGAATGATATGATGGGGAAATTCGGAACAACACTCAAAATGCTACCTTCACTGTTCAAACGGACACAAGTTTCTATTTCTGTTGTAATAAAGTGTGATATATATTGAATGTGTTTATGTTCTGACTTTCAGCTGGAATGAGATGAATAATGCAGAAAATCAATTATGTAGCTGCCAGTTGTGAAGCTCATGCCTTTCGGGCTTCAAACATAATTACTGAAATGCGTGCAACACTGGGACATTTCCAAACCACTTTAAAATCTGTTGCTGGTTGATCTCATGCTTTTGTAATGGAAGTTTTTATATTATTGAAGCATAGAAGCACACGAGAACACAGATATCTGCTGCAGTATCATTTACCTAACAACTGAACTATGTCTTGTACTGTACCCATACTGTATCTATGGCAATAAACTACTAGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816613.1 True 3575 mRNA 0.43 17 20339503 20347484
XM_039816614.1 False 3416 mRNA 0.43 16 20339503 20347484

Neighbor

gene id symbol gene type direction distance location
LOC120568950 atp5l,LOC108233819 coding upstream 3379 20334361 ~ 20336124 (+)
kiss1ra gpr54,LOC102788056,LOC101463985,LOC104942405 coding upstream 87366 20236804 ~ 20252137 (+)
zgc:113531 LOC104917724,LOC100692768,LOC101464837,LOC104948902,LOC102196942 coding upstream 314863 20020348 ~ 20024640 (+)
eef1da LOC106532782,LOC101466496,LOC102194655,LOC102290633,LOC103361414 coding upstream 392033 19921315 ~ 19947470 (+)
LOC120567775 adcyap1r1,LOC103396405,LOC102193585,LOC100710985,LOC104917732 coding upstream 457075 19854988 ~ 19882428 (+)
bcl10 bcl10,LOC102797731 coding downstream 9632 20357116 ~ 20359100 (+)
mcoln3a LOC104953893 coding downstream 12799 20360283 ~ 20366532 (+)
ssx2ipa ssx2ip,LOC103359758 coding downstream 19276 20366760 ~ 20373145 (+)
gpt LOC102200225,LOC103359759,LOC101485501,LOC100690242,LOC102299610,LOC102784352 coding downstream 29491 20376975 ~ 20396218 (+)
fuz fuz coding downstream 29674 20377158 ~ 20379307 (+)
G116327 NA non-coding upstream 16962 20322288 ~ 20322541 (+)
G116322 NA non-coding upstream 24232 20314888 ~ 20315271 (+)
LOC120567788 NA non-coding upstream 135765 20202125 ~ 20203738 (+)
G116216 NA non-coding upstream 436684 19902243 ~ 19902819 (+)
G116215 NA non-coding upstream 453804 19884595 ~ 19885699 (+)
LOC120567944 NA non-coding downstream 301121 20648605 ~ 20654150 (+)
G116461 NA non-coding downstream 344135 20691619 ~ 20691985 (+)
G116463 NA non-coding downstream 345403 20692887 ~ 20693141 (+)
G116464 NA non-coding downstream 345936 20693420 ~ 20696473 (+)
G116465 NA non-coding downstream 349420 20696904 ~ 20699209 (+)
emilin2a NA other upstream 874122 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1287261 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1614056 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 1665363 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 1737240 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 25743 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 535133 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1523469 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2260565 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 2294026 22641510 ~ 22681293 (+)

Expression


Co-expression Network