pter (pter)


Basic Information

Item Value
gene id pter
gene name pter
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20409135 ~ 20415934 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816631.1
TCGTGATCTCTCGCGATGATTCACACTTCTCGCACCTTATGGCTCTGCTAATCGGAGTAGCTGCTTTGAGTTCGGCTCGTGGTCGAAGTGGACCGCAAGAATCAAAAACAAGGTTGTTTGAAACCCTGAACACCAGTCATGTCAGAGTTGAGTGGGAAGGTCCAGACCGTGCTGGGTCTGGTGGATCCAGACCAGCTGGGCCGCACCATGACCCACGAGCACCTGACCATGACCTTTGAGTGCTGCtacttccctcctcctccaggcGATGAGGAGGTGGCGGAGAACCCGTTCCAGATGCAGCACATGCACTGGCTGAGACAGAACCCCTACAGCTGTCACGAGaacctgctgctgcagcaggagACCGGCGCCGTGCGGGACGAGCTGCTGGCCTACAGGAAGGCCGGCGGGGGCACCATAGTAGAAAACACCACCACGGGCATCGACCGGGATCTGCCCACCCTCAAGCAGCTAGCAAAGGACACCGGGGTCCACGTCATCGCAGGAGCAGGGTACTATGTGGACTCCACCCACACGGAGGCCACCAAGAGAATGAGTGTGGAGAAGCTCACAGACATCATCATCAGCGAGGTGCTTCACGGCGCAGACGGCACAGACATCCGCTGTGGCGTGATCGGAGAGATCGGCACTAGCTGGCCCATCACGGAGAGTGAAACAAAGGTGCTGAGGGCCACAGCTCATGCTCAGACCCAGCTCGGCTGCCCTGTCATCATCCATCCCGGTAGGAATCCCACCGCTCCGGCTGAAATCGTCCGGATTCTTCAGGAGGCCGGAGGTGACATCAGCAAAACTGTCATGTCACACCTGGACAGGACTATATTTGATGATGGTGAACTGCTTGAGTTTGCGAAGCTGGGGAGTTATCTGGAGTATGATCTCTTCGGAACAGAGATGCTGAACTACCCGTATAACCTGGAGGTGGACATGCCCAGTGACAGCCAGAGAGTGAAGGCCTTGGCGTTCCTTGTGAAGGAGGGCTACGATGACAAGATAGTGGTTGCACACGACATCCACACCAAGAACCGTCTCACCAAGTACGGCGGCCACGGCTACTCTCACATCCTGAAGAACATTGTGCCGAAGATGCTGATGAGGGGCATCTCGCAGAACCAGGTGGATAAGATCCTCATCGACAACCCAAAATGCTGGCTGACCTTCAAATAACGCAAAAAGAGCGTTTTGATGTAGCGATTATTTTATCTCCAGATAATGACTAAACCCCCCCCCACAATCTTTGCAATAATCACATTCCccactcatttataaatgtgtttttggacCCTCAAATCAATGAGCGTACAATGTTCGTGCATCAATATGTCTTTAATGTCAATGTTCTTACATTTTTCAGCAAAGCAAAATGTTTTGTAACTTTGTCTTTCCAATGGAAAATACGGTAATTACAGGCTGTTGTTTCATCCAGCTTAAATAGTTTTTACAGAGGCCCTCATTAATTAAAACGTGAGTTTATATGTGTGATTATACATTATTCACTTTGTAAGCAAATAATATGAAGGAACCTTGCAGGATCACAGTGCCTCTCATTAGCAGTCTTGTTTTGGTCCCATTTATGTCACACAAAAATAGCTTCTTGCCTGCAGAAATGTGAATGCAATCTAAAACTCTTTCTCTGGAGGTGTTGTCTACAGTGGTGCTCACTGCTCACAAATATGGTGCTAATTGATTTTTCAATGTTGCTTTCTTTGTATTCGTAAGTGGCATTTCTGCaaatgacaatgacaataaCGAGCGCGGTAGTAATCAGTATGCCGCTCTGCTCTCAACATAATGCGGCTGTGTTGGAGTTGTCCTGTTGCCCCTCAGTGGGTGTCTATGGGAGGCTGACTGGATGAAGGACATGTTCTCCTCTCATCTGGGAACAGGTGGTCTCACAGGGTGACTTCACCACATGATCAATGGCATGATCGCCACAAGTGACTGTGCGCCGTGAAAAAACAATATAACTTTGATTAATCTTCCGAGGATTAAAAAGTTACGAGATTTAATTTGACATGATACTTTACACATTAGCTGACAGTCTTCACAATCAGCAGGCAAATCGATGTATGTTGAGGAAACATTTATGTCAGCATGACTGTCCAGTTTTGTGATGATGACTAACCACCAGACCACCCTGTCGCCCCAACCAGCTGTCGTATTGAGAGAAAATGAATTACAATGGTTATTTTGTGACAGTGCTTCAATATGAACATTATAATGGCCCTTGACACATTCTTTGATGTGTTTTGATGCTGCACGGTGTTAACATGTCATATTTATAATCATGCATCACTACGGCTTTTAACATTTTCACTCAAAATGCAACAACTATCTAatagttttgaaaaataaagCACACATGGACTAATAA

Function

symbol description
pter Predicted to enable hydrolase activity, acting on ester bonds and zinc ion binding activity. Predicted to act upstream of or within catabolic process. Orthologous to human PTER (phosphotriesterase related).

NR:

description
PREDICTED: phosphotriesterase-related protein

GO:

id name namespace
GO:0009056 catabolic process biological_process
GO:0016788 hydrolase activity, acting on ester bonds molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K07048 PTER, php; phosphotriesterase-related protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816631.1 True 2395 mRNA 0.47 5 20409135 20415934

Neighbor

gene id symbol gene type direction distance location
LOC120567661 NA coding downstream 57904 20348509 ~ 20351231 (-)
ift22 ift22,LOC102787459 coding downstream 69742 20336698 ~ 20339393 (-)
atp6v0b atp6v0b,vato,LOC102788333 coding downstream 190340 20208710 ~ 20218795 (-)
b4galt2 b4galt2 coding downstream 201641 20026059 ~ 20207494 (-)
ccdc24 NA coding downstream 388874 19994125 ~ 20020261 (-)
mmp16b LOC103369336 coding upstream 22533 20438467 ~ 20455878 (-)
cables1 cables1 coding upstream 117177 20533111 ~ 20558297 (-)
gata6 gata6 coding upstream 172850 20588784 ~ 20595162 (-)
mib1 mib1 coding upstream 204354 20620288 ~ 20675826 (-)
greb1l NA coding upstream 277433 20693367 ~ 20740029 (-)
G116368 LOC101078271 non-coding downstream 17415 20390357 ~ 20391720 (-)
G116366 NA non-coding downstream 21073 20387498 ~ 20388062 (-)
G116328 NA non-coding downstream 83261 20325649 ~ 20325874 (-)
G116292 LOC107655868,LOC106532782,LOC108241678 non-coding downstream 471722 19924212 ~ 19937413 (-)
G116293 NA non-coding downstream 526726 19879905 ~ 19882409 (-)
LOC120568747 NA non-coding upstream 164586 20580520 ~ 20585677 (-)
G116484 rock1 non-coding upstream 352701 20768635 ~ 20771028 (-)
G116499 NA non-coding upstream 390219 20806153 ~ 20806691 (-)
G116508 NA non-coding upstream 411578 20827512 ~ 20827711 (-)
G116525 NA non-coding upstream 503035 20918969 ~ 20919716 (-)
xcr1b.1 NA other downstream 613376 19793342 ~ 19795759 (-)
G116138 NA other downstream 943755 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1186409 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 1473644 18931974 ~ 18935491 (-)
G115941 NA other downstream 1562858 18844905 ~ 18846277 (-)
tmie tmie,LOC102776014 other upstream 568867 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 592114 21008048 ~ 21010576 (-)
G116969 NA other upstream 1846064 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2929784 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 3014432 23430366 ~ 23430992 (-)

Expression


Co-expression Network