LOC120568893 (LOC100705068)


Basic Information

Item Value
gene id LOC120568893
gene name LOC100705068
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31929145 ~ 31939478 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816640.1
ATGCAGTACAGCTGTAGCTCTTCAGCAGGACACCTTTCCTCGCCTTACTGGAGTagaaCAATGCTCTTCCCTGACTGGGCCTACAAACCAGCCTGGTCACCGGGCTCCAGGCAGGTCCAGCTGTGGCACTTCCTGTTGGAGCTGCTGGGGCGGGGGGAGGGCGGGGCCATCGGCTGGGGAGGGGAGTGGGGCGAGTTCGTCATCCGGGACCCCGAGAGGCTGGCCAGGCTGTGGGGGGAGAGGAAGGGCAAACCACACATGAACTACGACAAGCTCAGCCGGGCGCTCAGATACTACTACAACAAACGCATCCTGCACAAGACCAAAGGGAAAAGATTCACCTACAAGTTCAACTTCAGCAAACTCATCCTGGTCAACTATCCAGGATAcccaccacctccaccaccaccaccaccaccacccccgaGCCATCAGCTGGTGCCGAGCGGCCCTCttccctttcctctcctccccacCGAGAGCGCTCTGCCCCTGTGTGGAGGAGTGGGCTCGCTGATGGACAGAGGAGTCCAGTCTGTGCCTCACCCCTTCCTGCTCCCGTGCTGCCTCCCTAAGTCCATCCCGACCCCCAGGGGGGCTCTCCACGGCCACTTTCCCTACATCTCCGCCCCTGCACGTCCGGGGGCCGACATAAGGGAGGCAGGCCTCCCGCAGCTCCCCTCGGCCCTCCATGTGAGCGCCAACGGCTGGCCGAACAAGAGCCCTGCAGGGTGGGATCTGAACCACATCAGTCGAAGCCTGTTTAGTGGAGTGAAGCAGACTGAAAttcaaggagaggagaggagagcggGGAATAACGCACagatgggggagagagagtgagaaagaggaACAATGTACAACAGATGGACTGCTTTGCCTCCTCAAATCTCTCAAATACTGCTTTTTTAAAGTCATTGaacagtagtttatttattgagTTGggccatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtttgatagaAATACTGAGGAAGCGACTTTTCTTCTGTCAGCACTTCTTGGCACAG

Function

NR:

description
PREDICTED: ETS translocation variant 3-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816640.1 True 1097 mRNA 0.57 5 31929145 31939478

Neighbor

gene id symbol gene type direction distance location
eif3f eif3f coding upstream 63910 31860730 ~ 31865235 (+)
LOC120568980 NA coding upstream 475685 31431806 ~ 31453460 (+)
LOC120567691 LOC107740693 coding upstream 917821 31007722 ~ 31011324 (+)
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 1710423 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 1872036 30055815 ~ 30057109 (+)
lig1 lig1,LOC102777267 coding downstream 2725 31942203 ~ 32016352 (+)
mpz mpz,LOC102776110 coding downstream 92174 32031652 ~ 32051435 (+)
LOC120568430 LOC103373937,LOC105937883,LOC100694151 coding downstream 135598 32075076 ~ 32115947 (+)
sdhc sdhc,LOC103479501 coding downstream 179475 32118953 ~ 32124498 (+)
trnar-ucu_14 NA coding downstream 186879 32126357 ~ 32126430 (+)
G119332 NA non-coding upstream 13544 31849440 ~ 31915601 (+)
G119328 NA non-coding upstream 86174 31838382 ~ 31842971 (+)
G119306 LOC103370525 non-coding upstream 197855 31730145 ~ 31731290 (+)
G119285 NA non-coding upstream 285947 31641354 ~ 31643198 (+)
LOC120568739 NA non-coding upstream 318384 31608971 ~ 31610761 (+)
LOC120567918 NA non-coding downstream 116577 32056055 ~ 32059373 (+)
G119398 NA non-coding downstream 185086 32124564 ~ 32124915 (+)
G119409 NA non-coding downstream 401647 32341125 ~ 32341363 (+)
G119415 NA non-coding downstream 408643 32348121 ~ 32349713 (+)
G119416 NA non-coding downstream 425088 32364566 ~ 32364768 (+)
pip4p1a tmem55b,LOC101161334 other upstream 14441 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 59650 31865755 ~ 31869495 (+)
G119257 NA other upstream 468237 31459864 ~ 31460908 (+)
G119123 NA other upstream 693580 31198960 ~ 31235565 (+)
G119114 NA other upstream 725559 31165226 ~ 31203586 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other downstream 128085 32067563 ~ 32071312 (+)
cadm3 cadm3 other downstream 188980 32128458 ~ 32226483 (+)
LOC120568569 NA other downstream 513227 32452705 ~ 32471570 (+)
G119582 vangl2,LOC103137974 other downstream 829229 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 835596 32775074 ~ 32775682 (+)

Expression


Co-expression Network