LOC120568902


Basic Information

Item Value
gene id LOC120568902
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26825716 ~ 26833382 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816645.1
ATGGAGCAGCAGCGGGGCTTCTGTAGCTTCACCCCGGGCGAGTCTGCACGTTGCGGGGCTGGGGTCTCCACCATGCGTTTGTCCATCACCTCGACCACCGGCAGTCCGGTGGAGCTCACTGTCCCCCGAGGAGAGACTGTGGAGGGACTGAGGACACATATCTCCCACAAACTCCGGCTGCAAAAAAACAGAATCGCCCTCCTGTACAGAGACAAGCAGCTGACTGCAGGCAAACTGTTGGACCTGGGTGTAGCAGATGGAAGCAAACTGACCCTGGTCCCTGCCATTGAAGCTGGTTTAGTGTGCCCCACTGCCAGAGCTGAGAGAACTATGATGGACGTCTTGGAAAGTTTAACAGAAGACCAGATCAGTGACTTCCTGTCTGGGCGCTTGCCTCTGACCATTAAACTGGGAATTGGCGCCCACGTGATGTATGTGCAGCTCCAACTGACTGCACAGAACGTGGCGGAGCTACAGCAGCACCGGGACATAAGAGCTGGGAGCAGCAGCGAGCTTCAAACCGGCCTGCCCGCTGCCGCCAGGATGAGCCATCCTGACTCCTCCACCAACGCCACAGGGTCCACCACCTTACCTGCTTCTCAAAGTTCTGCTGTAGCCCAGGACTCTCCTGACTCTACACCCTCGATCCAAATGAGCACTCAGAGACCCAGAACTTCGCACTCACTCACCACTGCCCCTCCACGTCAGTCCTGTCCTCCACGCTCTACGCTCACatcttctcctcttctttcaACCCCTTCTTTGCCTTCTGGTTGTCCGCATCCCAGCTGTCCACTACCAGCAGCCACACCAATCTGTTCACCTGCTCCCTCCAGCTCCATTCCAGGACCCCAGAGCCCAGCGCTAGCCTCAACCTTCAAAGAGAGTAATGCTCATGCATCATCCACTGCAGAGCCATGCAAGCCGCCAGGAGCAGTCATAGAAAGTTTAGTGAGCCACTCTCCAGGCGTCTTCTCAGGGACCTTTTCTGGCACTCTGGCCCCTTGCAGTCCGAGCAACGTCAGCCATCCTCCACGTGGCATCGCCATCATTCTCCAgatcctcaacgacctcctcaggGCTGCCTTCCACCACCAGGGGGCTCAACCTGCCCCTCCTCATCTCCCCTGTCCTGATGCGAACACCCCAGCCAGCCCCCCCCTCACAGCCGAGgagcaaagcaaagcaaaaagCAAAACACTGGCGACCCAGAAGACCGAGCACCTTAGCAAAACTCCAGGTGAGGAGAGTCATCCCATCTGCTCATCCACACAGGAAATTCAAACACTGCACTGTAAGCTGGAGCGCCTGCAGTTTTTGATGCATCAGAGGCGTCTTCGCAGGCGGACTCGCAGGATCTCACAAACGTCTCACCCATATCAGCATCGTCCCTAGTCTCTTGGACAGAAAAGATCCACTCACTGTGATAGCAATGGCAGCTTGGAAGCCACCATGGAAACCAAAGCTGACCTCTGAACTTGTGGAACAGGTGAAAGAGCATCAGGGTTTGTTGCTATGGTATATAGttttagtatagtatatagttttGTTGCTTTGTTGCTATTTTTAAACTATGAGCGTTTTTGAAGAATGTAAGCCCAAAAAGTCCATGGAGTCTTATTCCTGTGGCTGTCACTGTGCTGAGCATGTTATTTCATCAGAGTCTGTCCTTTAGTGACAATGGCTCTCATTGTTATGTAGCATATGCCACAAAAGGTACACTATACATTTTCATCTTGGTGTTTTGTACAAAGACCTCTAactgtatgtttgtttatgtattccAATGCCTTAAATGTACATGTCTTGAATGTAAACTGTATGTTTTGTTCTGTGCAGGGGATGTTCCTCTAAAATGTTTTACTTATgcaatattaaaatgtaaacacaaggaaggaaagaaaaaaagaataaatgaaaaaatgtaaaacctGGA

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko05410 Hypertrophic cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816645.1 True 1936 mRNA 0.51 7 26825716 26833382

Neighbor

gene id symbol gene type direction distance location
armc6 armc6,LOC102784696 coding downstream 44618 26777037 ~ 26781098 (-)
LOC120569007 LOC103357614 coding downstream 52771 26765481 ~ 26772945 (-)
LOC120568933 LOC104965402,LOC103357616,LOC102791396 coding downstream 110281 26674033 ~ 26715435 (-)
LOC120567967 LOC104952378,LOC100703940,LOC102297870,LOC103357619 coding downstream 172758 26604861 ~ 26652958 (-)
LOC120568700 fam102b,LOC103357623 coding downstream 244497 26572397 ~ 26581219 (-)
stk11 stk11 coding upstream 21953 26855335 ~ 26880767 (-)
sugp1 sugp1 coding upstream 48415 26881797 ~ 26889897 (-)
LOC120568414 LOC102790141,LOC102302803,LOC104929656,LOC105934591,LOC102195635,LOC100696847,LOC101486463 coding upstream 143634 26977016 ~ 26985046 (-)
plekhj1 plekhj1 coding upstream 153350 26986732 ~ 26990773 (-)
LOC120567768 NA coding upstream 164659 26998041 ~ 27002052 (-)
G118186 NA non-coding downstream 93632 26731877 ~ 26732084 (-)
G118165 NA non-coding downstream 224331 26532167 ~ 26601385 (-)
G118076 NA non-coding downstream 346038 26477463 ~ 26479678 (-)
G118075 NA non-coding downstream 350760 26473887 ~ 26474956 (-)
LOC120569074 NA non-coding downstream 398918 26421450 ~ 26426798 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding upstream 127018 26960400 ~ 26963752 (-)
G118321 NA non-coding upstream 246625 27080007 ~ 27142908 (-)
G118328 NA non-coding upstream 285650 27119032 ~ 27190233 (-)
G118337 NA non-coding upstream 341170 27174552 ~ 27197648 (-)
G118341 NA non-coding upstream 345730 27179112 ~ 27182570 (-)
cirbpa cirbp other downstream 1146 26819838 ~ 26824570 (-)
G118175 NA other downstream 159764 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 506121 26315770 ~ 26319595 (-)
G117732 NA other downstream 1902398 24922203 ~ 24923318 (-)
G117560 NA other downstream 2289220 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 809945 27643327 ~ 27675360 (-)
G118524 NA other upstream 880085 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 1312889 28146271 ~ 28152770 (-)
G118764 NA other upstream 2152709 28986091 ~ 28986319 (-)
G118856 NA other upstream 2586997 29420379 ~ 29420652 (-)

Expression


Co-expression Network