LOC120568914 (LOC104950559)


Basic Information

Item Value
gene id LOC120568914
gene name LOC104950559
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14430089 ~ 14436206 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816665.1
TGTCCGGTCACAGCTGAAGGAGAGGGCTGCCAGTTGTTCACCTAACATCACCGACACACAGCTGGAGAAGCAGCTCGACAACAAAATGAGAATTACACTAATTCCATTATTGCTGGCCCTGGCTGCTGCCTGTGTGCCTGCCCTCTGTGGCAACAAGGAGCAGCCTGTCCCCCAGCCTGAGGCCCCGGTTGGAACCCGCTCCCACTTTGCTGCTCTGGACGATGTGCGTCTTTTGGCGAACGGCCTCCTTCAGCTGGGTCAGAGCCTGCGGGAGTTTGTGCAGAAGACAAAGGGACAGATAAATGACATCCTCCAGAAGCTTAACATCTTTGACCATTCGTTTTACCAGCTCTCAGTGTTCGCCAGTCAAattaaagaggaagaagaggagctgaagaagaccaCCGTGGTACTGAAGGCTAACAGTGAAGAGATCAAGGGCCTGTCTGTTGAGATTAGCTCCAAAGTGGACAGCATCCTGCAGGAGAAGAGTCGGTTACAGAACAAGGTGGATGGGATGGAGGAGAAGCTGCGCAGCCTGACACATGGCCTGGTGACGAGCGAACAAGTGGGAGAGATCAATAGTCTCAAGGAGCTGATCCACAGCCAGGAGCGGAGCATTACGGAGCTGCTGAACGCTATGAGGGAGCAGAGTGACCAGCTCAACCACCAAAGGATTATGATCAAGACTCTGGAGGAAAAGTTTACAGTCAACACATTGACCCAGGAGACCATTGAGAGGATGCCTGAAATCCTGAACAGCGAAGCACCAACCCTCACCCCTTATCTGACCTCAAGCTCTACCAGCACCACCGACATGATGAATCTGCCATCAGACTGCAGTGACCTGTTCAACAGAGGGGAAGGGGTCAGCGGCGTCTATGCCATCAGACCCACCGGAACAGAGCCCTTCATGGCCTTTTGTGACATGAGCATAAATCATGGAGCAACAGTCATTCAGCGAAGGAGGGATGGTTCAGTGAATTTTGATCAAATCTGGGACAAGTATGAAAATGGGTTTGGAGATTTTCAAGGGGAGTTTTGGCTGGGTCTCAGGAAGATCCATGCTCTAGCCGCTCAGGGAAACTCTGTCCTTCACATCCAGCtagaagactggaaacagggcaGGCACTTCATAGAATACAGATTTTACCTTAGTGGTCTTGAGAGCAACTACACCATTCATCTCACGCATCTATCAGGAGATTTGGCGGACCCCATGAGCAACCACACAGGCATGATGTTCTCCACCAAGGACAGGGACAATGACAACCACCAGGACTCCAACTGTGCCCACAACTACACAGGTGGATGGTGGTTCAACGCCTGTGGAGAGACCAATCTGAATGGGAGATATTTCCACATGAGACCTAAGGGGCGctcagagagaaggagagggattCAATGGAGGCCGGGCCAAAAGGCTTCTTACTCCCTCAAGCTCACTCAGATCTCTGTACACCCTATGGCTTCCCCCAGCACCACCTCCTCCACTTCAGCCTCATCTGAGACAGGTGTCTTTCTGAGATCCAGCACCAGAATTCTCCAGTAAAATTTGCATTTAACAGTGGCCTCTTCAGGACAGACTTGGAAATGCTTCCTTTGGCCCAGCCATAGTTTAAGAAGGCTTACGCCTTCTACACACTGGATGTGtggtgtttctgttgtgtgtcagttgcgttttctatgtctttacacaccagaaacgtgtctgacgcggtgcttctgctgctagcctcgtctggacacatgtatgtttcccattgataaactgCACTCAAGCATTAGTATACttcattttaaacataaatatatactgatttgattacagccaAGACAACATCAgcagtattgatggcaaaataggctacagaatatttcgttctgtattgacaggtgcaacatttgaaaatcgataattatttattattattattttaaattacatttaaatttgcATTTATGTTAAAACCTAGAAACTTTccaacatcaaaatgtaatttatgaaattaatttgtgtcaaaatgacatataaacatctttttctattctattttgcctggaaacgcttccaacacgcttgcgtatcgtgtgaaaaataggcgccGACCCTATTTTTAGCATGCacgcgtgtcacgcaggcagtctgcaactctaacctgttaacatgggagccgaaataaaaacggacacgccacgcagctgacacgctcacgccacacatCCAGTGTGTAGCTGGCCTTAGGAACAGAGGTGTCAAGTTCCAGTACATGAAGTCACAGAGGACACTAAATAAGCTTTAAAATTCTGAGTGCTGTTGTGTGCTAAACTGAGAAAGCCAAAATGATATATTGCTGCCTAAAGCCAGGGTAATCTCTAATTGAATAGAACAATTGTATTGTGAAATCTGAAATACACTGAAATGCAGTTAGCATGCAATATATCTTACTATATCACTCACTGTATCTCAGAGGTCAAAGGTTATGGAGAAGAAATTAAAACATACAGCCATATGtgagcagttttttttattgggtCACAGTGACTCTCAGTATACAGCACTGGTTCCCAACATGGGGTGGGACCCCTTGAGTCACAAGATACATCTATTTTTAATTTTAGGTTAAAAAATGCACTTAAATAATTAATCCATTCTAATTGCTAAGAGCTCACAATAGTTGATGATTTGTCAACTAATGGTTTCAATTcacttaaaggggctgtacttgaTATTCTGAACAATAATGTAGCAGTAAACAACTATTTGCTATACTATAGAGATATGGTGGGGAAATggcatcctgagcagagaatgaagtcacactccctctatgtgtgttgtaatcatagactgtaatgATAATGGACGTTACATCAGTGATGTCACCAATTGGATTGTAGACTGCTGTTTTGGCAGTTTGGCCTtcgccatcttggttttttgaAACCGGAGGTGACGATTTTTGGACAAGAGGGTGGAGCTGGAGAGGATGACTCACGCAGgcaagccagtgttgtttatggttacAATGGCACTGCGCTAAGCCAAATGCTAAATAGGGAAAGTTGTCAATTTTCAACTAGCTAAAGCGAGTCATCCAGCAGACTTGTCCTGTTGGGTGAACACAAACCTTCGGGTACTGGCGCCATTTATCTGCATGTATGGCAGTACAGAAAATCGGCAGACTTTCCCTAAATTTACCAGTTAGCGCTAGCACTAGTTAGCTAGCCTTGCTTTGCAAGGTGCAACTGAATGCTGAACAAGACATAGACCAAAATGCTCCTATTACCTTCGATGAAGTGAatgtttacagtctatggttgtaaTCTAAACTtctctgttgtttgttttgataGCTGGTCCATCTGTGAATGCATGTTAGTGCATTTGAGTGCCTTGTGCGTCGGTATCTGATGCCGAGGGAAGTGACAAAGCGAACTGACATCTGTAATGAGTAACAAGGCATCCTTAGTAAATAGGCTATTGCTTCATCTTCATAAGGCAACAAGAGTTGGAAACCACTGCTATAGATAACACTCATCTATACTTTACATActctatttttgatatatttgctatgttttattaatttaaataaataaaagtgtggATATCCGTACCTGAAAACATAATGAAAACCCTGATCAAACCTAACTGAACTCATAATGTCCTGTTTGTTATTAAAGACTGTAGAATGATTGCGGTCCTGACATTGGTCAGGCACAGCATGGTCTTGCTATGTCAACAGAGATTCGTAGTATTTGTAGAGTAATGCAATCCTTGAACTAAAAACACCAACTTTTTATGCCTAAGTCTAGTAAATGAATGACTAATGCATGTTCATGCTATTACTATGTACTATTGCACTGGTAGGTTGTGATGCCACACTCTTTTGTACTGTCTTGTTGAATCCCTAAATAAACTTAAGAGGGCAGTGTTGGTCTGTCTCATGCATA
>XM_039816666.1
CCCAGGATCCTCCCTGTTTGTCCGGTCACAGCTGAAGGAGAGGGCTGCCAGTTGTTCACCTAACATCACCGACACACAGCTGGAGAAGCAGCTCGACAACAAAATGAGAATTACACTAATTCCATTATTGCTGGCCCTGGCTGCTGCCTGTGTGCCTGCCCTCTGTGGCAACAAGGAGCAGCCTGTCCCCCAGCCTGAGGCCCCGGTTGGAACCCGCTCCCACTTTGCTGCTCTGGACGATGTGCGTCTTTTGGCGAACGGCCTCCTTCAGCTGGGTCAGAGCCTGCGGGAGTTTGTGCAGAAGACAAAGGGACAGATAAATGACATCCTCCAGAAGCTTAACATCTTTGACCATTCGTTTTACCAGCTCTCAGTGTTCGCCAGTCAAattaaagaggaagaagaggagctgaagaagaccaCCGTGGTACTGAAGGCTAACAGTGAAGAGATCAAGGGCCTGTCTGTTGAGATTAGCTCCAAAGTGGACAGCATCCTGCAGGAGAAGAGTCGGTTACAGAACAAGGTGGATGGGATGGAGGAGAAGCTGCGCAGCCTGACACATGGCCTGGTGACGAGCGAACAAGTGGGAGAGATCAATAGTCTCAAGGAGCTGATCCACAGCCAGGAGCGGAGCATTACGGAGCTGCTGAACGCTATGAGGGAGCAGAGTGACCAGCTCAACCACCAAAGGATTATGATCAAGACTCTGGAGGAAAAGTTTACAGTCAACACATTGACCCAGGAGACCATTGAGAGGATGCCTGAAATCCTGAACAGCGAAGCACCAACCCTCACCCCTTATCTGACCTCAAGCTCTACCAGCACCACCGACATGATGAATCTGCCATCAGACTGCAGTGACCTGTTCAACAGAGGGGAAGGGGTCAGCGGCGTCTATGCCATCAGACCCACCGGAACAGAGCCCTTCATGGCCTTTTGTGACATGAGCATAAATCATGGAGCAACAGTCATTCAGCGAAGGAGGGATGGTTCAGTGAATTTTGATCAAATCTGGGACAAGTATGAAAATGGGTTTGGAGATTTTCAAGGGGAGTTTTGGCTGGGTCTCAGGAAGATCCATGCTCTAGCCGCTCAGGGAAACTCTGTCCTTCACATCCAGCtagaagactggaaacagggcaGGCACTTCATAGAATACAGATTTTACCTTAGTGGTCTTGAGAGCAACTACACCATTCATCTCACGCATCTATCAGGAGATTTGGCGGACCCCATGAGCAACCACACAGGCATGATGTTCTCCACCAAGGACAGGGACAATGACAACCACCAGGACTCCAACTGTGCCCACAACTACACAGGTACAGCAGGTGGATGGTGGTTCAACGCCTGTGGAGAGACCAATCTGAATGGGAGATATTTCCACATGAGACCTAAGGGGCGctcagagagaaggagagggattCAATGGAGGCCGGGCCAAAAGGCTTCTTACTCCCTCAAGCTCACTCAGATCTCTGTACACCCTATGGCTTCCCCCAGCACCACCTCCTCCACTTCAGCCTCATCTGAGACAGGTGTCTTTCTGAGATCCAGCACCAGAATTCTCCAGTAAAATTTGCATTTAACAGTGGCCTCTTCAGGACAGACTTGGAAATGCTTCCTTTGGCCCAGCCATAGTTTAAGAAGGCTTACGCCTTCTACACACTGGATGTGtggtgtttctgttgtgtgtcagttgcgttttctatgtctttacacaccagaaacgtgtctgacgcggtgcttctgctgctagcctcgtctggacacatgtatgtttcccattgataaactgCACTCAAGCATTAGTATACttcattttaaacataaatatatactgatttgattacagccaAGACAACATCAgcagtattgatggcaaaataggctacagaatatttcgttctgtattgacaggtgcaacatttgaaaatcgataattatttattattattattttaaattacatttaaatttgcATTTATGTTAAAACCTAGAAACTTTccaacatcaaaatgtaatttatgaaattaatttgtgtcaaaatgacatataaacatctttttctattctattttgcctggaaacgcttccaacacgcttgcgtatcgtgtgaaaaataggcgccGACCCTATTTTTAGCATGCacgcgtgtcacgcaggcagtctgcaactctaacctgttaacatgggagccgaaataaaaacggacacgccacgcagctgacacgctcacgccacacatCCAGTGTGTAGCTGGCCTTAGGAACAGAGGTGTCAAGTTCCAGTACATGAAGTCACAGAGGACACTAAATAAGCTTTAAAATTCTGAGTGCTGTTGTGTGCTAAACTGAGAAAGCCAAAATGATATATTGCTGCCTAAAGCCAGGGTAATCTCTAATTGAATAGAACAATTGTATTGTGAAATCTGAAATACACTGAAATGCAGTTAGCATGCAATATATCTTACTATATCACTCACTGTATCTCAGAGGTCAAAGGTTATGGAGAAGAAATTAAAACATACAGCCATATGtgagcagttttttttattgggtCACAGTGACTCTCAGTATACAGCACTGGTTCCCAACATGGGGTGGGACCCCTTGAGTCACAAGATACATCTATTTTTAATTTTAGGTTAAAAAATGCACTTAAATAATTAATCCATTCTAATTGCTAAGAGCTCACAATAGTTGATGATTTGTCAACTAATGGTTTCAATTcacttaaaggggctgtacttgaTATTCTGAACAATAATGTAGCAGTAAACAACTATTTGCTATACTATAGAGATATGGTGGGGAAATggcatcctgagcagagaatgaagtcacactccctctatgtgtgttgtaatcatagactgtaatgATAATGGACGTTACATCAGTGATGTCACCAATTGGATTGTAGACTGCTGTTTTGGCAGTTTGGCCTtcgccatcttggttttttgaAACCGGAGGTGACGATTTTTGGACAAGAGGGTGGAGCTGGAGAGGATGACTCACGCAGgcaagccagtgttgtttatggttacAATGGCACTGCGCTAAGCCAAATGCTAAATAGGGAAAGTTGTCAATTTTCAACTAGCTAAAGCGAGTCATCCAGCAGACTTGTCCTGTTGGGTGAACACAAACCTTCGGGTACTGGCGCCATTTATCTGCATGTATGGCAGTACAGAAAATCGGCAGACTTTCCCTAAATTTACCAGTTAGCGCTAGCACTAGTTAGCTAGCCTTGCTTTGCAAGGTGCAACTGAATGCTGAACAAGACATAGACCAAAATGCTCCTATTACCTTCGATGAAGTGAatgtttacagtctatggttgtaaTCTAAACTtctctgttgtttgttttgataGCTGGTCCATCTGTGAATGCATGTTAGTGCATTTGAGTGCCTTGTGCGTCGGTATCTGATGCCGAGGGAAGTGACAAAGCGAACTGACATCTGTAATGAGTAACAAGGCATCCTTAGTAAATAGGCTATTGCTTCATCTTCATAAGGCAACAAGAGTTGGAAACCACTGCTATAGATAACACTCATCTATACTTTACATActctatttttgatatatttgctatgttttattaatttaaataaataaaagtgtggATATCCGTACCTGAAAACATAATGAAAACCCTGATCAAACCTAACTGAACTCATAATGTCCTGTTTGTTATTAAAGACTGTAGAATGATTGCGGTCCTGACATTGGTCAGGCACAGCATGGTCTTGCTATGTCAACAGAGATTCGTAGTATTTGTAGAGTAATGCAATCCTTGAACTAAAAACACCAACTTTTTATGCCTAAGTCTAGTAAATGAATGACTAATGCATGTTCATGCTATTACTATGTACTATTGCACTGGTAGGTTGTGATGCCACACTCTTTTGTACTGTCTTGTTGAATCCCTAAATAAACTTAAGAGGGCAGTGTTGGTCTGTCTCATGCATA

Function

NR:

description
PREDICTED: angiopoietin-related protein 3-like, partial

GO: NA

KEGG:

id description
K22288 ANGPTL3; angiopoietin-like 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816665.1 False 3957 mRNA 0.44 7 14430089 14436188
XM_039816666.1 True 3984 mRNA 0.44 7 14430089 14436206

Neighbor

gene id symbol gene type direction distance location
LOC120567626 LOC103364420,LOC104948953 coding downstream 531 14422482 ~ 14429558 (-)
LOC120568976 leprot coding downstream 9892 14416830 ~ 14420197 (-)
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding downstream 15389 14355617 ~ 14414700 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding downstream 80530 14339669 ~ 14349559 (-)
LOC120568148 NA coding downstream 99498 14321679 ~ 14330591 (-)
LOC120568348 lrp8 coding upstream 25266 14461472 ~ 14537465 (-)
LOC120567737 NA coding upstream 114831 14551037 ~ 14553669 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding upstream 125301 14561507 ~ 14564705 (-)
scp2a scp2 coding upstream 189961 14626167 ~ 14651376 (-)
czib LOC103363808,LOC100704007 coding upstream 217202 14653408 ~ 14658272 (-)
G114518 NA non-coding downstream 109326 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 258615 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 374566 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 481974 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 801422 13625776 ~ 13628667 (-)
G114538 LOC104949927,LOC103364340 non-coding upstream 4675 14440881 ~ 14447933 (-)
G114544 NA non-coding upstream 81270 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 253251 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 257426 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 315039 14751245 ~ 14751528 (-)
tfr1a NA other downstream 461278 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 947864 13469531 ~ 13482225 (-)
G114152 NA other downstream 1341526 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1454761 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1661464 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 177407 14613613 ~ 14618224 (-)
G114680 NA other upstream 359712 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 853876 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1707954 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1746448 16182654 ~ 16201698 (-)

Expression


Co-expression Network