LOC120568916 (LOC103366834,LOC107088619,LOC108239428,LOC101065249,LOC105934207)


Basic Information

Item Value
gene id LOC120568916
gene name LOC103366834,LOC107088619,LOC108239428,LOC101065249,LOC105934207
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 34827113 ~ 34834390 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816668.1
AGGCAGCATTGCATCACGTGACTAGTGCACAGCTGAGGGATGCTGAGGCTTGCCCGTTGCTAGCCTGTTAGCCATTAGCCGTGTCCAGTAATCCTGCCAGAAACAGCCGTTTCTTTTCACCTTTTCAAAGAAAATCACCCGGGGGAGATATGTTACAAGCCATGGAGAGGATACAGCGCACGTGGTCGTCTTCTGTATCTCCTCATATCATCAGCTTTTGGTTAGATGTCAATGTCATAATTTGTAGCTAGAGCTGTCCAGTTAGCTCAGCTAGCTCGTGTCTGGTTAACGCAGGACCAAGGCCAAGCGAGAAAAGGGAGGCCGTCGGGCAGTTGCTGTGTAGGTGgacggaggaggagaggagtagGACGTTGGCCCTGGATCAGACCTTCTGAAGTCCCCTCCACTGTGGCCTTGGTCACCGTCACCCTCAGCTGAGCAATGTCTTCGTCAGGGTGCTGCCACCTACCTGGCTCCCTTTGTGATTACTCGGGGAACGCCGAATCTGATGCCTCCAAGGATTCGGAGGAGTCCGATTCTACCGCGCAGGCCCAGTACATCGCCAAGGTGACGGCTAAAGATGGCCGCCCACTCTCCACCGTTGTCAAAGCGGTGAGCTTGCAGAgTGACGTGGGCATGTGTCGGATCTGTCATGAGGGAGCCGGAGGGGAGACGCTGCTCTCCCCCTGCGACTGCACTGGCACTCTGGGTAAAGTGCACAAGAGCTGCTTGGAGAAGTGGCTGTCCTCCTCCAACACCAGCTACTGTGAACTGTGTCACACAGAGTTCACTATTGAACGACGACCACAACCACTCACACAGTGGCTGAAGGACCCAGGCCCTCGCAGTGAGAAGCGCACGCTGCTGTGCGACATGGCGTGTTTCCTTCTCATCACGCCCCTGGCAGCCATCTCTGGCTGGCTGTGTCTGAGGGGAGCCCAGGACCACCTGCAACTGAAGAGCAGACTGGAGGCTGTCGGCCTCATCGCCCTCACCATCGCCCTCTTCACCATCTACATCCTCTGGACACTGGTTTCATTTCGGTATCACTGTCAGTTGTACTCGGAGTGGAGGAGGACCAATCAGAAAGTGCGCCTGCTCATGCCCGACATGAAAGGGGCCCACACCACTCAGCGTTCTGTGCCGACCAAGTCGACCAAGAAAATGACTGACGAGACCATCGTATGAGTGCAGAGCGGTGGCAAgaggaatatttaaaataacgCCCGCCCACTGAAGCGCTctctaaaacaaaacaaaaagtaatcTTATTAATAAACTTTTGCACTTCATAAGGACCATTTTGAGAGGGGAGAGCTACTTTCTCCTCCTGTTTTTCCTTTGTTGAAGCACTTGATGTAAACTACTACAGTATTGGCCGACCACAAAAGTGGTTTTGGGGAAGAACTCATTCCGGAGTCAAAGTCGATGTCTGAAACACGGACAGCCAGCGCTGGGATGTGAACGACTGAACACCGGACTACCCAGCCCAACTGTGTGTCCCTGATACAAACTTAAGAAATATTAAGACACAAGCTAATGTAGCAGGATATTACTGATTCAGCATGCTACTACAGTATAATATGAAACATATTCACTACCTATAATTCCCCATGTCCCTTCACAATGTATTTAGCTGTGTTTTTGAACAATGGGCAGCCAATAATAGCCCGGCAGAAGGATAATAATAacctaaaacctaaaaaaacCATGATTGACAAAGTCTGTCTGTGAATATTCTTCAAGTCGAGGGCAACAGTCGCTCATACCAACGTTGTTGTCTACAATCTGAACCCCTTTAAAGTTTCCTGGTAAAGCTTTATCATTGCTGTGTGAACGGTGgaaattgaatatttttttccttGTTTAGACAAGAGCTAAGGCATCACATATTTGTCAAACTTGCCCCGGGGGTCAGTGAAGATTGTACTGCGTGGGATAACACTAACTGCAGCCGTTAAACGGCAGTGCAGTAATGTATAGGGAAATAGTATTGAAGGTGTGGTAAAAGTGTTCTTTTTGGGGTTCTAATTTGGATAACGTCTCTACTATTGTCATAAAAGTGCATTAGCAAACAGCCCTGCTCCCCTTGTAAATGCACCATTCATTAATTGAGATACCTAGCAATGACCAGTAGTTATGTCCTACATCACGAGAGATTTGATTGAAATTAGAAGAGATCCAGTGTTCACAATAGTGAGACTATATACTTTTGTCCTATATAAAAACACAGATGTACCAGAGCAGGCTGGTACCCAGTAAAGGTGCAAAAGAGAAATGTGTTTTCAGATGTCAGTGTATGCACCACATGCTATACAAAGTATTTTGTGTTATTGTAGTCTTCCTGTTgcatcccccccacccccggaAAGTTGGGTTATTGTGCAATAAAACATGAGGGACTCCTGGACTAAATCAACGTGAAA

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MARCH2-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K10657 MARCH2; E3 ubiquitin-protein ligase MARCH2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816668.1 True 2426 mRNA 0.48 5 34827113 34834390

Neighbor

gene id symbol gene type direction distance location
LOC120568811 timm44,LOC103366833 coding downstream 12986 34801856 ~ 34814127 (-)
LOC120568806 LOC104944843,LOC103366831,LOC100693121,LOC108239552 coding downstream 45107 34771789 ~ 34782006 (-)
LOC120568197 LOC104920973,LOC101485682 coding downstream 114526 34710574 ~ 34712587 (-)
LOC120567794 NA coding downstream 314076 34510848 ~ 34513037 (-)
crtc1a LOC103361998 coding downstream 324421 34486051 ~ 34502692 (-)
LOC120567735 NA coding upstream 14919 34849309 ~ 34850649 (-)
LOC120568778 LOC107751211 coding upstream 27662 34862052 ~ 34863627 (-)
LOC120567702 NA coding upstream 37394 34871784 ~ 34873121 (-)
LOC120567703 NA coding upstream 56511 34890901 ~ 34892250 (-)
LOC120568955 NA coding upstream 89676 34924066 ~ 34925378 (-)
G120379 NA non-coding downstream 350 34826520 ~ 34826763 (-)
G120374 NA non-coding downstream 7524 34809896 ~ 34819589 (-)
trnan-guu_9 NA non-coding downstream 58599 34768441 ~ 34768514 (-)
G120365 NA non-coding downstream 82455 34741217 ~ 34744658 (-)
G120341 NA non-coding downstream 193976 34632905 ~ 34633137 (-)
G120394 NA non-coding upstream 70767 34905157 ~ 34905380 (-)
G120395 NA non-coding upstream 82910 34917300 ~ 34917535 (-)
G120416 NA non-coding upstream 130755 34965145 ~ 34965538 (-)
G120420 NA non-coding upstream 134752 34969142 ~ 34969564 (-)
G120427 NA non-coding upstream 159462 34993852 ~ 34994744 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other downstream 34346 34787168 ~ 34792767 (-)
G120230 NA other downstream 423100 34400823 ~ 34404013 (-)
G120168 LOC105912833 other downstream 598063 34228626 ~ 34229050 (-)
G119989 NA other downstream 1167837 33654302 ~ 33659276 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other downstream 1177596 33645095 ~ 33649517 (-)
G120390 NA other upstream 61189 34895579 ~ 34895913 (-)
LOC120567704 NA other upstream 176718 35011108 ~ 35014245 (-)
LOC120568374 NA other upstream 224391 35058781 ~ 35069787 (-)
LOC120567705 NA other upstream 327419 35161809 ~ 35162981 (-)
LOC120567714 NA other upstream 1874905 36709295 ~ 36737250 (-)

Expression


Co-expression Network