LOC120568924


Basic Information

Item Value
gene id LOC120568924
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5874452 ~ 5885417 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816678.1
CTACAATCCAAACATGGGAAGACTATTCAGCCTACTTATCCTATTCAGCCTATTCATCAAATATGCTCAGCAGCAGACCTGCTCTTCTCTCCAGAACCCAAATATGGTCTGCAAATATGCCGAAAATGAACTGACCAGATACAATAATGAGGAGATCAGGATTGTGATGGTGGGGAAGACCGGAGTTGGGAAGAGCGCCACAGGAAACACCATTCTGGGAAAACCGTACTTTAAATCAGAGTTTTCATTTGACTCTTTGACTAAACACTGTGTTAAGGCCATCGGTGAAGTGGATGGACAAATGGTTGCTGTAATTGACACTCCGGGTCTGTTTGACACCAGCACTGATGAAAAGGAAACCATTAACAATATTGCCCAGAGCATTGCTTATGCTTCTCCTGGACCTCACATCTTCCTGGTTGTTATCAAACTGGGCAGATtcacagaggaggaaaagaagacGGTGCAGAAGATTCAGGAAATCTTCGGAGAGGAAGCagacaaatacagcatggttcTCTTTACCCATGGTGACCAGCTCAAAGGGAAACCTATTGAGGAGTTCTTGAAGGACAGCGAAGAGCTGCAGGAACTTGTGGACAAATGTAACGGCCAGTACCACGTCTTTAATAATGAGATCAAGGATCATTCTCAGGTCAGGGAGCTGCTCGACAAGATCAGATATATAACAGAGAAGAACGGAGGAAGTCATTACACCACTGAAATGTTCCAGGAGGCAGAGAGGAAGATAGAAGAGGAGAAACAACGCATCcttaaagagaaagaagagcaaatgcgcaaaaaggaagaggaaatgaaaaagaaactaGAGGAAAAGTATGAGCTACAAATAAAGGAAGCGGAGGCTGACAGAGAGAGGATGAAAGTGTTAGTTGCAGCTCGTGAGAGAGagttggaggaggagaggaacaaATATAGAGAAGAGCAGGAAAATCGCGCCAGAAGGGAAGCTGAGAACAGTAATCCAATAATCAAACTGATAAAACGTTTCTTCAAATTTTTCTTTGGGTAAAATAAGAAATTTGCTGGTTTGCAGGTGAAATTCTGACTTGCTGAAAAGCAGCAGCTTTACCAAACTGTTCTCTCCACAGTCCCTTTTTGATTTTCCTGTGTAGTGCTTCAATGTCAAATGAACACAACTAAATTCCACAGGTTAATAATTGTACAAGATGATCGATCCATATTTAGAAGTGCCACAGCTTGGAAAGATCATGTTTCTATGGTGATCATGAAATAAATCTGATAATAAATGACATACTGACATCAGTCAGAGGTTAAAGATACTAAATACAGGACATGAAGGTCTCCTTCCATTTAATGTGACACAGAACCAGGTAGAAACATACAAAGGAAACagatttttacacacaaacttctttcattcattttatttcattttatgtaACTGTGAAACAATAACTGTAAATGGATGCCACCGAGCTGCACTCCTGTGACGACACAAACTTTGTACAGTAGCCTCCTCCACTGGCCTGGAAGAACTGTAAAGTCTGAACGATACAGCTGGTGAGAAATTAATTAAAGGACAGAATATGtccaaaaactaaaataaggAGGCTTTTGAAATTACTTTAAAATCTATTCAAAAAATGTTAAAGTCATTGCTAATTTAAACTCTCAATAACACAATCAAATTATTAAATCTCACATTAAggtgtagttttatttttaaggtgaaatgttaaagtatatatttaattaaaccAAAGTAGACCGGAATacaaaaattcacatttctattCCATTTATTCTTCCACATTGCCATTTTGGattttgtatgtaaaaaatatttttacaatattCTAATGTAATATTTAAACATCAgacatttataaaatgtgatgccATCATATCACAAGACATTGAGACTATATTTCTCATTGTTATGTTTTCCTTTCATTGCagctttgatttttttctttacttatttcattatattttaatatgtcCCTCACTGACTTACTGTTTTTCTTTAATGGAGCCTCCCAGCATTAGCATTTTATACATATATTCGTATAATCAGTTTGACAATAAACATCAAGACTCTTTGTTGTCAGCAGTGTTTTATAGTTGTGGTGTTTTTACATGAAGTCTTTATATAATGAAGTTTCTCTTCAGACAGACTGACTTTACTTCTTCAGCTCAGCAACAAAACTGATCTTCTCTCCTTAACCCAACAATGGCCAGCAAATATGCCAATAAGTCCATAACATTTATTCATAATGTTGGTTGTAACTTGTATCTAAACAAACATTTATAGATGGATTGTATGTCATAACATGAACCAATCCCAACAGTATTAAAGGGGAAAGTGCTTGAATTGAAAAACTTTTCTGAAATtctcagtttttttgtgattcatTCTGCATTATATTTAGAGGTGCTTCTGTTGTTTGGCCTACCCTTGCCTAAAAATTATAACATTCATGAAGGAGGATTTATTGCAGTACTGCTGTATTAGACTGTATTAGTTTGTggcaggtgttcctaataaacAGTCAACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816678.1 True 2546 mRNA 0.37 3 5874452 5885417

Neighbor

gene id symbol gene type direction distance location
LOC120567973 NA coding downstream 6042 5842529 ~ 5868410 (-)
LOC120567975 NA coding downstream 62090 5810326 ~ 5812362 (-)
znf622 znf622 coding downstream 156235 5705604 ~ 5718217 (-)
march11 march11 coding downstream 175212 5684216 ~ 5699240 (-)
basp1 NA coding downstream 387791 5423991 ~ 5486661 (-)
LOC120568045 fam134b coding upstream 2610 5888027 ~ 5917140 (-)
nol7 NA coding upstream 91864 5977281 ~ 5982538 (-)
LOC120568550 LOC107380363,LOC107396089,LOC107391794,LOC107390451 coding upstream 159905 6045322 ~ 6046252 (-)
LOC120568053 NA coding upstream 175308 6060725 ~ 6062992 (-)
LOC120568672 NA coding upstream 191734 6077151 ~ 6078837 (-)
G112332 NA non-coding downstream 82689 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 152482 5720657 ~ 5721970 (-)
G112245 NA non-coding downstream 169878 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 176511 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 216090 5652999 ~ 5658362 (-)
G112352 NA non-coding upstream 37330 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 197224 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 228045 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 461918 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 471381 6356798 ~ 6357990 (-)
G112328 NA other downstream 22005 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 128371 5723733 ~ 5746081 (-)
G112233 NA other downstream 205765 5664004 ~ 5668687 (-)
G112046 NA other downstream 1590369 4267538 ~ 4284083 (-)
G112043 NA other downstream 1635782 4238102 ~ 4238670 (-)
LOC120567959 NA other upstream 286864 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 810193 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1071023 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 1191192 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2602050 8487467 ~ 8487539 (-)

Expression


Co-expression Network