LOC120568937 (fyttd1,LOC102800050)


Basic Information

Item Value
gene id LOC120568937
gene name fyttd1,LOC102800050
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15194894 ~ 15199229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816696.1
CGGGGCATGCGAACCGTTTACGCTCGGAGGAGGATACTGTCTATGGGAGGATCGCAGTCTCAAAAGGAACGAACAGCTAGCACGGCTGACGTCTAGCTAGCCACTGTTGTATTTGTCTTTGCACTCGGGattgtttcttgtgtttttaaagtatgaatgaagattattttacagcagGTCGGGGGAAAAGACCAGCGGTTCCCGACAAAGTCGACATGTCATTAGATGACATCATTCGGTTGAACAAAAAAGAGCAACAGTTAAAAAGGAAACAAGCCACCGTGAACCGCCGACAAGTCAAGAAGAAGGGCCGTTTAATCCAAGGAAGGGGAGTTTTATCAAGAACTGCTGGACCAGTCCAGAGAGGAGGTGGCGTGCCCCGAGGAGGAGCACCTAAATTAAGAAACAGAAGAGTCCCTCCCCCACCTGGTCGACGACGAGGTCAAGGGGTTATCACAGGACTGGCCGCCAGGAGGCCAGCTGCCCTGCTGAAACGAATCGGGACGCTTAACAGAGCAGCATTCAACCAGAAAACAAAGTCCTTCATTCAACGCGCTGAAGCCCCGTACAGAAAGCCAGAAGCACAGAGGCGGCCGTACAGGCAGCCCGATCTACAGAGAGGTCAGAATGCTGCAGGAGTCAGGAGACCGTTTCAGCTGCGACGACGACCTCTGCCGCCTGTCCAGCAGACTCGGAGGGAAGCACGCCAGGCCACATTTCTTTTTCACAGAGGACTCAAGGTACAGGCCCAGGTGCAAAAGCCAAATCCTAGCAGTTCTCCAGTCAGAACTCGGCAGTGGCGCACATCAACAACCAGCAGTGGAATCTTGACTGTTTCAATTGATAACCCCACAGCCAGGACTCAGCCTGAGCCTCCCACTGCTTGGACGCTGCATCCCCCAGCTGCCATCTCCGCTCCTGTCAAGGTGGAACAGGTGGAGAAGAAAATCCCAAAAGGAGTGCCTCTGCAATTTGACATCAACAGCGTTGGGAAACCGCAAACATCGATCACCCTGAATGAGCGATTCCGCATCCTAAAAGATCAGCGCACAACCACAGCACAAAGCAGCAAAGGCAGCCGATTTGTTACCGTGGGTTAGCTGGCAAGAAGACCGCGGCGAGGAATGCTCAGAACCCTTTTTTTATCCTGCTGCTCAGACCCACACCGTGAACCCCGCTCTTTCTGATGGATGGGATGTGCTGACCCACAGACTGTCCTTACTAATGGGAGGGAGGACAACAGTGGGACACAAGTACAACACGCACAACTGTGAGAACTCCAAGTGTCAATGGAAGAGTATGTTTAAAATAAGTTCCCAATAATTGTCCATATCATTTTACTCCGCTGTCTGTATTGTGGATATCCTATTCTGGGCAGGAAGGAGCtttccctccccccccacacacttGGAACTGTTGACACATCATGAAGACCGCTTGgaagtatttatttttcagagaggacagttATGTATTTGCTCGGATGGCACGTATGTTCTCAATACTTTTTTTCTTGAGAATGGTTTTGTaatgtttcttcaaataaaGGAGTGCTCTTTAAATATTTGGTA

Function

symbol description
fyttd1 Enables mRNA binding activity. Involved in mRNA export from nucleus. Located in nuclear speck.

NR:

description
PREDICTED: UAP56-interacting factor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816696.1 True 1571 mRNA 0.50 9 15194894 15199229

Neighbor

gene id symbol gene type direction distance location
LOC120568091 NA coding downstream 35120 15152126 ~ 15159774 (-)
LOC120568089 NA coding downstream 48164 15137827 ~ 15146730 (-)
zbtb41 zbtb41 coding downstream 66929 15120583 ~ 15127965 (-)
LOC120568424 LOC104947192,LOC102778292,LOC101467453,LOC103361239,LOC102192915 coding downstream 150241 15039845 ~ 15044653 (-)
LOC120568704 LOC100707385,LOC103362031,LOC102195140 coding downstream 277463 14895172 ~ 14917431 (-)
LOC120568939 LOC104921307,LOC103368498 coding upstream 12058 15211287 ~ 15217482 (-)
LOC120568471 LOC103359773,LOC101067191 coding upstream 112153 15311382 ~ 15328062 (-)
LOC120568473 LOC102208486,LOC100705462,LOC101474278,LOC102304097,LOC102795444 coding upstream 130035 15329264 ~ 15330964 (-)
eif4a2 eif4a2 coding upstream 210275 15409504 ~ 15414489 (-)
LOC120569139 NA coding upstream 211933 15411162 ~ 15411347 (-)
G114752 NA non-coding downstream 112914 15076141 ~ 15081980 (-)
G114733 NA non-coding downstream 191849 15001144 ~ 15003045 (-)
LOC120568695 NA non-coding downstream 236491 14954578 ~ 14958403 (-)
LOC120569096 NA non-coding downstream 412422 14780276 ~ 14782472 (-)
G114661 NA non-coding downstream 443366 14751245 ~ 14751528 (-)
G114836 NA non-coding upstream 65291 15264520 ~ 15266224 (-)
LOC120568803 NA non-coding upstream 188249 15387478 ~ 15393259 (-)
G114883 NA non-coding upstream 208148 15407377 ~ 15407627 (-)
G115017 rps8 non-coding upstream 521790 15721019 ~ 15727229 (-)
G115041 NA non-coding upstream 535825 15735054 ~ 15735281 (-)
G114680 NA other downstream 397850 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 576670 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1226083 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1712669 13469531 ~ 13482225 (-)
G114152 NA other downstream 2106331 13084561 ~ 13088563 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 90853 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 944931 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 983425 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1118189 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 1131723 16330952 ~ 16335956 (-)

Expression


Co-expression Network