LOC120568939 (LOC104921307,LOC103368498)


Basic Information

Item Value
gene id LOC120568939
gene name LOC104921307,LOC103368498
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15211287 ~ 15217482 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816697.1
AAGCAGTCACGATAAAGTGCCAGAAAAACCAGGATCCAGTCCAGGATGCAAATCATATTCATCTCAAGCCCTCAAGGAGCCCAAAAACTGCagGTTTAGAATCCAAGTAACATTCCTGCCAATCAGCAACATGCTGGGGATAAACTGCTCCCGCACTGCTCTTTTCACAACAAATGCCACAGTTTTCAATGCCATGGGCTGCCCCGAGGCTGCTGTGGTGTGTGGAATGAATATCACCTGGGTGTTGGCTAACAGTACTGCACAAGATGCAGATGACATGTGCTTGAGCGAGAAGGAGTACCTGGCCATGTTCCTGGGGCCTCCGAGGTCCCCTGAGttccttcctgtctgtgtcaccTACCTCACCATCTTTATGTTGGGCGCACTGGGCAATTCTCTGACCTGCCTTGTCATTTTGCGCCACAGAGTGATGCAGACGCGCACCAACTACTACCTGCTGAGCCTGGCGGTGTCTGAcctgctggtgctgctgctgggcaTGCCATTAGAGCTCTACGAGATGTGGCAGAACTACCCCTACCTgctgggggaggggggttgcTACTTCAGAATATTCCTGTTTGAAACTGTCTGCTTCGCTTCCATCCTCAATGTCACGGCGCTCAGTGTGGAGCGCTACGTTGCAGTTGTGCACCCCCTCAAAGTCAAACACATGACCACACGTGCTCACGTCAAGAGGGTCATCTTAATGCTGTGGGTGGTGTCCATGCTGTGTGCTGTGCCAAACACTAGTCTGCATGGGATTTGGGTGCTGCCTCCAAAGTTTGGACGACAGTTTCCACGATCTGCTATGTGCCATGTGATTAAGCCTATCTGGATGTACAAGCTGGTCATCCTGATTTCCACACTGGCCTTCTTCCTGCTCCCCATGCTGATAATTAGCATTCTCTACCTACTCATTGGCTTGAGGCTGCACCGGGAGAGGATGATAATTGTGGTGGAGACCGGGTGTAGCTTTGGACCGGAAAGTTTGTCTAGGTCCCACGAGCAGAAGCGGAGCAAACGCAACCTGCAAGTCACCAAAATGCTGTGTGTGCTGGTGGTTGTGTTTGGCCTTTGCTGGGCTCCCTTCCACGTGGACCGCTTGATGTGGAGCTACATGTCCGAGGAGCATCACCATATCTTCAAGCACGTCCACATCGTCTCTGGAGTCTTATTCTACCTAAGCTCTGCCGTCAACCCTATCCTCTACAACCTCATGTCCTCCAGGTTCAGAGAAATGTTCAGCCACGTTACTTGTTATTCTAATAGCTGGTCAGCGCGCTCCAGCTTACAGTTGACCCAACGCAGCACCTTGAGCGAGAAAATGCCCAACAGTATTTAGTCGGGGCCAAAGGAAAATGGTGTGGATTGTATCCTATGGCCTTCACAGTCGCCAGATCTCATTCCAACACCATCATCGACACACCCAATGAGGGAATTTGAAGTTGTTCTAGAAGCTTGTGCTGTTCCAACACCCTATGATagtttttcctttcatttgtcacCCATCCGTACATATCAGTATCCCATAGACCTTCGTATAAGAAAGGTCCCCAACTGGAATGATATCCTCTTTGTGGTAGGGAATGTCACACAAAGACAAGATGACCTGGTGTCACACTGAATGGTTAGAACCATGTGACCAAAGGCTACGTGAAAAAGCCTTAAGAGACGcacttaagaaaaaaataagcattCTTTTTGCTGCACTCTcttttactgtatctgaaagTCCTTCAGACTGCAGAAATATCTACAGTAGCTGAAATCCCATTTAGAGAGAAGACCAATGAGACTGAATTTAGCGAAAACAATTATGGGATGGAGCAACATCCACCTCTCCAATGTCAATGTTCAGATGAACAATGATTTTATCATATTTTATCATATTTAACATGCTTTCACAGCAAAGAATGAATGCACAATGGCTCCTCATGGTCTAGGAATGAAATGAAAGAAGATTAAGTGAAGAAGGGGAATAAACATAAGGCAACGGTTTGTCTGTGGCAAAGCTGATTACTCATGTGCCTTGCAAGTATTTCCTCACATATTTCTTTGATAACTGTGTTGTGTACTTATTTATACAATGTACAATGTTAGTAATTCTACATGTTGTTTAAAGCTTAATGGGTACTGCCAGGTTTAAATGATCAGCTGCATCCATTGCTTTCCTGATAGTTTTTTATGTTTCATGTGTTgaaatgttgctttaatgttttttaaagcaATATTTTATTAATGTACAGGACCTAATTCAGTATTGTCTAGTATATAATAAAAGCATGTGTTTTTCTTAGTGTGTACCCTTGTAATAGTACATATGATTAAATGACCTGCTTTTGAACATCA

Function

NR:

description
PREDICTED: neuromedin-U receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816697.1 True 2352 mRNA 0.45 4 15211287 15217482

Neighbor

gene id symbol gene type direction distance location
LOC120568937 fyttd1,LOC102800050 coding downstream 12058 15194894 ~ 15199229 (-)
LOC120568091 NA coding downstream 51513 15152126 ~ 15159774 (-)
LOC120568089 NA coding downstream 64557 15137827 ~ 15146730 (-)
zbtb41 zbtb41 coding downstream 83322 15120583 ~ 15127965 (-)
LOC120568424 LOC104947192,LOC102778292,LOC101467453,LOC103361239,LOC102192915 coding downstream 166634 15039845 ~ 15044653 (-)
LOC120568471 LOC103359773,LOC101067191 coding upstream 93900 15311382 ~ 15328062 (-)
LOC120568473 LOC102208486,LOC100705462,LOC101474278,LOC102304097,LOC102795444 coding upstream 111782 15329264 ~ 15330964 (-)
eif4a2 eif4a2 coding upstream 192022 15409504 ~ 15414489 (-)
LOC120569139 NA coding upstream 193680 15411162 ~ 15411347 (-)
LOC120569141 NA coding upstream 194181 15411663 ~ 15411840 (-)
G114752 NA non-coding downstream 129307 15076141 ~ 15081980 (-)
G114733 NA non-coding downstream 208242 15001144 ~ 15003045 (-)
LOC120568695 NA non-coding downstream 252884 14954578 ~ 14958403 (-)
LOC120569096 NA non-coding downstream 428815 14780276 ~ 14782472 (-)
G114661 NA non-coding downstream 459759 14751245 ~ 14751528 (-)
G114836 NA non-coding upstream 47038 15264520 ~ 15266224 (-)
LOC120568803 NA non-coding upstream 169996 15387478 ~ 15393259 (-)
G114883 NA non-coding upstream 189895 15407377 ~ 15407627 (-)
G115017 rps8 non-coding upstream 503537 15721019 ~ 15727229 (-)
G115041 NA non-coding upstream 517572 15735054 ~ 15735281 (-)
G114680 NA other downstream 414243 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 593063 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1242476 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1729062 13469531 ~ 13482225 (-)
G114152 NA other downstream 2122724 13084561 ~ 13088563 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 72600 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 926678 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 965172 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1099936 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 1113470 16330952 ~ 16335956 (-)

Expression


Co-expression Network