amy2a


Basic Information

Item Value
gene id amy2a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17317113 ~ 17325659 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816711.1
atcaacaTGTTGTAACTCAGGGAAAGTTTAAACTGTTGCAACATCATCTGGTTATTGAACTGCATGAACAAATACTGAAGCAGGATAAATCTAACCTGTTATGTTCTAACTGGAAAAGCATGAAGTTGTTTATTCTGTTGGCTCTGTTCGGGCTCGGCCTTGCCCAGCACAACTCCCACTTCAGGCACGGCAGGACGGCAATCGTCCACCTGTTTGAGTGGCGCTGGGCGGACATTGCTGCAGAGTGTGAGCGTTTCTTGGGTCCCAATGGCTTTGGTGGAGTTCAGATCTCCCCTCCAAGTGAGCACATTGTGCTAGACCATCCCTGGAGGCCCTGGTATCAGAGATACCAACCAATCGGCTTCAAACTGTGCTCCAGATCCGGCAATGAGAACGAGCTGAGAGACATGATCACCAGATGCAACAACGTTGGGGTCAATATCTATGTGGACGTTGTCATCAACCACATGTGTGGCTCTGGCGGTGGAGAGGGAACCCACTCTTCATGTGGAAGCTGGTTCAGTGCTAGCAAGAGGGACTTCCCCAGTGTCCCATTTAGCAAAGCTGACTTCAATGACAACAAATGCAGGACTGGCAGTGGCGAGATTGAGAACTATGGTGATGTCAATCAGGTGCGTGACTGTCGTCTGGTCGGTCTATTGGACCTCGCCCTGGAGAAAGATTACGTCAGGGGAAAGGTGGCTGACTACATGAACAAGCTGGTTGACATGGGTGTGGCTGGATTCAGAGTGGATGCCTGCAAGCACATGTGGCCCGGTGACCTGTCTGCTATCTACGGTCTTCTGAAAAACCTCAACACCACGTGGTTCCCTGGTGGCTCCAAACCCTTCATCTTCCAGgagGTTATTGACTTGGGAGGTGAGCCCATCACATCCAGAGAGTACTTCCATCTGGGAAGAGTGACTGAGTTCAAATATGGTGCCAAACTGGGAACTGTATTCAGAAAGTGGAATGGCGAAAAGCTGTCTTACACCAGGAACTGGGGAGAGGGATGGGGTTTCATGCCCAATGGCGATGCTCTTGTCTTCATTGACAACCACGACAACCAGAGAGGCCATGGTGCTGGTGGTGCAGCCATTGTTACCTTCTGGGACTCCAGGCTCCACAAGATGGCTGTTAGCTACATGCTGGCCCACCCTTACGGAGTAACCAGGGTGATGTCCAGCTTCCGCTGGAACCGCCACATCGTCAATGGAAAGGATGAGAATGACTGGATAGGCCCTCCCAGCCATGCAGATGGATCCACCAAATCTGTTCCTATCAACGCTGACCAGACTTGTGGAGATGGATGGGTGTGTGAGCACAGATGGCGTCAGATCAAGAACATGGTTATTTTCCGCAATGTGGTCAATGGACAGCCTCACTCCAACTGGTGGGACAACCAGAGCAACCAGGTTGCCTTTGGGCGTGGTAATCGTGGATTCATCGTCTTCAACAATGATGACTGGGACCTGGATGTGACCCTGAAAACTGGCATGCCTGGTGGCACCTACTGTGACATAATCTCTGGCCAGAAGAATGAAAGCAGGTGCACTGGGAAGCAGATCGATGTTGGGGGGGATGGCCAGGCCCACTTCAAGATAAGCAACAGAGATGAGGACCCCTTTGTTGCCATTCACGCTGACTCCAAGTTGTAAAACCATCATgtacaactttaaataaaactttCAAACTTAAA

Function

NR:

description
PREDICTED: pancreatic alpha-amylase-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function
GO:0043169 cation binding molecular_function

KEGG:

id description
K01176 AMY, amyA, malS; alpha-amylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816711.1 True 1699 mRNA 0.51 10 17317113 17325659

Neighbor

gene id symbol gene type direction distance location
LOC120568298 LOC103353952,LOC100690840,LOC102305671 coding upstream 177567 17097270 ~ 17139546 (+)
LOC120568635 NA coding upstream 221289 17064933 ~ 17095824 (+)
LOC120568716 acvr2b,LOC106516905,LOC108232890 coding upstream 256364 17047694 ~ 17060749 (+)
LOC120567614 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 coding upstream 272051 17043061 ~ 17045062 (+)
rheb rheb,LOC106516909,LOC108232948,LOC106592571,LOC106596806 coding upstream 278009 17032876 ~ 17039104 (+)
dcaf8 dcaf8,LOC102795666 coding downstream 218011 17543670 ~ 17552930 (+)
lrrc42 lrrc42 coding downstream 245918 17571577 ~ 17574473 (+)
tceanc2 tceanc2 coding downstream 255000 17580659 ~ 17583761 (+)
LOC120567749 LOC103353067 coding downstream 462126 17787785 ~ 17967693 (+)
larp6b NA coding downstream 646396 17972055 ~ 17973556 (+)
G115446 NA non-coding upstream 92375 17217910 ~ 17224738 (+)
G115445 NA non-coding upstream 106902 17204663 ~ 17210211 (+)
G115442 LOC103353955 non-coding upstream 130460 17183152 ~ 17186653 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding upstream 147295 17168573 ~ 17169818 (+)
G115404 NA non-coding upstream 158913 17157628 ~ 17158200 (+)
G115488 NA non-coding downstream 158747 17484406 ~ 17484811 (+)
G115506 NA non-coding downstream 232266 17557925 ~ 17559880 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding downstream 239596 17565255 ~ 17565482 (+)
G115516 NA non-coding downstream 253251 17578910 ~ 17579589 (+)
G115585 NA non-coding downstream 642081 17967740 ~ 17968042 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 704907 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 789431 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1088562 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 1395582 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 1474019 15764683 ~ 15843094 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 80838 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 701621 18027280 ~ 18029895 (+)
G115729 NA other downstream 979490 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 1240974 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 1334770 18660429 ~ 18674140 (+)

Expression


Co-expression Network