LOC120568957 (LOC103353943)


Basic Information

Item Value
gene id LOC120568957
gene name LOC103353943
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16751993 ~ 16754766 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816723.1
GGCAGATCAACGCGCCGCTTCCTGTGAGACCAACAGTAACaacaagaggaggaagaggaaaaacgACAGCTCTGGATCGTCGTCGACTGCCTTGCGTGACAACACAGGGATCGCGTTCAGGGCTTCGGGTTGCTCTAAATTGACGTGCAACATGTCTGATTTACTGAGATATATCGACTATGACCACAAAGCCACCTTTCTAAAGATGCTCAACCAGCAGAGGATGGAAGGTGAGCACTGtgatgtggtggtggtggtggaaaaCATAGAGTTCAGGGCTCACCGCTGTGTCCTGGCAGCCTGCAGCAACTACTTCAAAAAGCTTTTCAAGAAACAGAGCGACGAGGACAACTCCATCGTGGAGTTGGACTTCATCCGCTCTGATATCTTTGAAGAGGTGCTGAATTACATGTACACAGCCAGGCTCGCTGTGAGGAAGAAGGACATCAATATGATGATGTCATCCGGCCAGATCCTGGGGATCAACTTCCTGGACAACCTGTGCACCCAGAAACGTGAGCTGACCAACATGAAGACCCGGGAGAACCAGGCTCCTGGGGACCACGGGATGCGAGCTCAGGACGCCATCCTGAAGGAGTTGGCAatggaggaagtgaggaagaacAGCTTCTATGATCAGGGGATGGATGGTATGGGCCCCGGGGGCTCACACGTGTCTCAACCGCACAACTACAACACCAACATGAGCAAAGATCCTCACAGCCACGGCTggggctcctcttcctccagcgACATGAAGCTGGAGTACCTGCTGTACGGCCACCGCGACCACGGCTCCTGCCAGAGCTCAGGTGCCAAGCCCATGGACCACAACGCCAAAAAGGAGCGGCTGCTTACCGCCAACCGGCCCTATGCCTGTGAGCACTGCCCCAAAGCCTTCACCACTGCCGCCCACCTCAAGGAGCACCTGAAAATCCACTCCGGCTTCAAGCCTCACCGTTGCGTCGTGTGTGGCAAGGCCTTCATCAGGGGCCCCGACCTGAAGAGGCACGAGAGGGTCCACAGCAACGAGCGGCCCTTCGGCTGCCAAATCTGCGAAAAGGCTTTCAAGCACAAGTCTCACCTGAAAGACCACGAACGGCAGCACCGGGGCGAGCGGCCATTCAACTGCGGCTCCTGCGAAAAAGCCTTCATCAAAGCGTCGGATCTGAAGCGCCACTGGAACACCATGCACAGTGGCAACCCCCGCAGACAGATGACCCTGTCTCCCGCGGCCTCCCAGCACGGCCAGGCAGAGGCCACCGACCAGAGAGACTGGAAAATGGAGACCGGGCCACATTCGCATAACTCTGGGGACTGTTGAACCTGCAAACGCACCAAAACACACTCGTACTGACATACAGATGCACATACATCCACAGCAGTTGTCACTTAAAAACATGTATACACACTGACACAACACAACCCTGTGACAGGCTGGCGGCCTGACATCACATGGACAATGATCGGAGTGAGTAACGAGATCACAGCATGTTCATAAGACTGTGGggctgtattattattattattattctaaagAGTTATGTCAAAACGATGTTTTCTTTCCACCTGTAAAATCATGTAAATGTTTAGTTCACTCTACatatatttttcacaaaaagcaTCGTTGCTATCTAGACTGAGGGTTCTCATTACATTATTCTCTTTTACTTTTATGGGATATgtaacatttaaatgtttgtttaaccTTTACTGAATTTTATGGagataaaagagagaaacagaatgaggaggaggggggtgggagggggggggagatttTTCTGCATAACATTTGTTGCATTGAGTATATTCATGTGGATGTTTTTAATGGATGTGTTTAGTTGTATTGATTGATATTACACTGTAATAAGTAAGATTCACCATTTTGCATTTGATGCAGATGATACCAAAGTCTTGGGCATTTGACGGATAGTCTTTAAAGGCTGTCCTGCCCAAGCAACCGGCCAACTAGATTTACTGTTATACAGTATAACTGTCATCCAGCTATCAACTGTTAATGATAGAtgtctgtatatactgtagcttAGTTTGTTGCACAATTAGAGTACACAATAATGAATTATGCACATATAACATTGTCCTACTCCTACACTTTGACAATAAACACcatttgctgtgtttta

Function

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 14-like

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816723.1 True 2147 mRNA 0.49 2 16751993 16754766

Neighbor

gene id symbol gene type direction distance location
LOC120568912 apcdd1,LOC102777074 coding downstream 39729 16685480 ~ 16712264 (-)
acss2l LOC100697261 coding downstream 189830 16541130 ~ 16562163 (-)
napgb napg,LOC102781071 coding downstream 315752 16430142 ~ 16436241 (-)
LOC120568161 LOC104950912 coding downstream 509296 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 543016 16202077 ~ 16208977 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 59926 16814692 ~ 16820034 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 93044 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 265969 17020735 ~ 17022393 (-)
LOC120569119 LOC101466820,LOC102797643,LOC103353954,LOC100700019 coding upstream 411125 17165891 ~ 17176411 (-)
LOC120568842 LOC103353955,LOC104931259 coding upstream 428396 17183162 ~ 17275789 (-)
G115331 NA non-coding downstream 718 16750900 ~ 16751275 (-)
G115323 NA non-coding downstream 137068 16613028 ~ 16614925 (-)
G115309 NA non-coding downstream 191520 16543613 ~ 16560473 (-)
G115278 mtcl1 non-coding downstream 239098 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 435021 16316651 ~ 16316972 (-)
LOC120569046 NA non-coding upstream 68536 16823302 ~ 16824660 (-)
G115391 NA non-coding upstream 282100 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 357950 17112716 ~ 17114744 (-)
G115429 NA non-coding upstream 365155 17119921 ~ 17121046 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding upstream 367956 17122722 ~ 17123058 (-)
G115312 ralbp1,LOC102778314 other downstream 112181 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 416037 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 424567 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 550295 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 603872 16144160 ~ 16148121 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 1565 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 285034 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 288360 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1298218 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1725904 18480670 ~ 18494488 (-)

Expression


Co-expression Network