acsl3b (LOC103356873,LOC102195906)


Basic Information

Item Value
gene id acsl3b
gene name LOC103356873,LOC102195906
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 25931541 ~ 25944450 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816728.1
ACGTCATTCAGTAGCTTCCGGGCTGGCAGCACTGGCCCGGTGATGTTGAGATTTACAATTTGACCACATTTTATATACCTTTTGTAACAGACTAGCAGTCGTAATTTATAACCAAATACATCCTGTTAAtagattaaataaatataatgtcAGAGCTTTGGTTACAAGGATAAAGAGACTTAATCCAACCCCCCCCCAGCGACTCAGGCGTAGCGGTTGAGAAAAGAGGTCTGGTTGCCTTGCTGCAAGAACCACAGCAGTTCATCATTGCTTGTCTGGTGTGATTCATCTCCAGCCCTGACTTCATCCTCAAAGATGAAGTTGAAGGAGGATATGaaccccctgctgctgcaggtcttCCACTCGGTGGTCTGGGTCTACTCTGTCATCACCTTCATACCCTGGTACTTCTTTTCCGGAGCTGGCACCAACTTGGAACGGGCTCGCCGGATCAAGGCACGCTCAGTTAGTGGACACCCAGCAGGGCCTTACCGGGCCATCAACAGCCAAGACAAGCTGGTAGCCTGGCTGCACCCTAGGGTGGACACCCTGGACAAAATGTTTGAATACGCTGTGAGTCGGTTTCCGCAGAGAGACTGTCTGGGCACCAGGGAGGTGCTCAATGAGGAGGATGAGCCCCAGCCTAACGGCAAGGTCTTTAAGAAGGTAATTCTAGGGAACTATAACTGGCTGTCGTACGAGGAAACCTACAAGGCAGCGAGGTGTTTTGGCAGCGGTCTGGCAGCACTCGGCCAGAGACCTCAGTGTAATATCGCCATCTTCTGTGAGACCAGAGCAGAGTGGATCGTGGCAGCACAAGCCTGCTTTATGTACAATTTCCCACTTGTGACCCTGTACGTCACTCTTGGACCCACGGCCATCGCGCACGGCCTGAACGAGACCGGCATCACGCACATCATCACAAGCAAAGAACTGCTACAGAGCCGTCTCAAGGCCATACTGTGTGATGTGCCGAGGCTGCAGTACATCATCGTAGTAGACCCTAAACCCACAAGCTGGCCAGACATCCCCAGAGGCATCATGGTCTACAACATGGACGCTGTGAAGGAGATGGGATCCAAGCCTGACAATTTAGCAGTAGACCGCAGACAGCCAGAGCCCTCGGACATCGCGGTCATCATGTACACCAGCGGCTCCACTGGCATCCCCAAGGGTGTCATGATCTCCCATGGCAACATCATTGCTGGCATCACTGGCATGGCTGAGCGAATCCCTAACCTCAATGAAACCGACACCTATATTGGCTACCTGCCATTGGCCCACGTTTTGGAGCTCAGCGCCGAAATGGTGTGCATCTCTCACGGCTGTCGCATCGGCTACTCCTCCCCTCAGACTCTAGCCGACCAGTCCACAAAGATAAAGAAGGGCAGTAAAGGGGATACCAGTGTGCTGAAACCTACTCTCATGGCTGCTGTACCAGAGATCATGGACCGAATCTACAAGAATGTGATGACCAAAGTGGAGAAAATGAGCAAACTCCAAAAGACGCTGTTTGTGCTGGCTTACAACTACAAGATGGAGCAGATCTCCAAAGGCTACAGCACGCCTCTCTGTGACAGGCTGGTGTTCAAACGAGTGCGTGCGCTCTTGGGAGGAAACATACGGGTGCTGCTGTCTGGCGGAGCTCCGCTCTCCGCTGCCACACAGCGCTTCATGAACATCTGCCTGTGCTGCCCTGTGGGCCAGGGCTACGGCCTGACAGAGACCTGTGGAGCTGGCACCATCAGTGAGAtgtgGGACTACAGCACAGGACGCGTTGGCGCTCCATTGGTTTGTTCAGAGATCACGCTGAAAGACTGGGAGGAGGGTTGTTACTACAGCACGGACAAGCCCAACCCACGGGGGGAGATTTTGATTGGCGGCCCCAACGTAACGATGGGTTACTACAAAAATGAAGCCAGGAACCGCGAGGACTTTTTTGTGGATGAGCACGGCCAGAGATGGTTCTGTACAGGAGACATCGGAGAGGTCCACACTGACGGATGCCTTAAGATCATCGACCGTAAAAAGGACCTGGTGAAATTGCAGGCAGGCGAGTACGTCTCTCTAGGAAAAGTGGAGGCCGTTTTGAAGAACTGCCCACTCGTAGACAACATCTGTGCCTATGCTAACAGTGACCAGTCGTACGTGATCAGCTTTGTGGTGCCTAACCACAAGCATCTAACGGTGCTGGCGGAGCAGTTGCATGTGAGTGGCACATGGGAGGAAATGTGCAACAACTCGCAGATTGAGAAAGAGGCCCTCCGCATCATTACTGAAGCTGCTCTCTCAgCGAAAATGGAGCGATTTGAGATCCCCAAGAAGATCCGTCTGAGCGCCGAGCCCTGGACACCAGAGACCGGGTTGGTCACTGACGCATTCAAACTGAAACGCAAGGAGCTCAAAACACACTACCAGGAAGACATTGAGAGAATGTATGGAGGAAaataacacatacaaacacactccaaacaacaaatacacataGATATacttgcacacatacacagggagCTCAGAAGCCACTACCGGGGAACACTTGGGAGAGGAGTTTTACTTAGATACaggtacaaacaaacaaacacacacacacacacacacacacaca

Function

NR:

description
PREDICTED: long-chain-fatty-acid--CoA ligase 3-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01897 ACSL, fadD; long-chain acyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816728.1 True 2608 mRNA 0.52 15 25931541 25944450
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120568896 NA coding upstream 120261 25808021 ~ 25811280 (+)
LOC120568352 ephb1,LOC103359190,LOC105935923,LOC107384019,LOC106599529,LOC106907045 coding upstream 373909 25376185 ~ 25557632 (+)
LOC120568394 LOC103359187 coding upstream 577758 25281304 ~ 25353783 (+)
gpc5c LOC103359185,LOC104919215 coding upstream 669200 25140737 ~ 25262341 (+)
LOC120568127 NA coding upstream 817739 25085974 ~ 25113802 (+)
scg2b LOC104966178,LOC102792743 coding downstream 15356 25959806 ~ 25963171 (+)
LOC120568964 dhrs12,LOC103356877,LOC100697743 coding downstream 24160 25968610 ~ 25972306 (+)
LOC120567653 LOC104919205,LOC102308383,LOC100712433,LOC101483053,LOC102214738,LOC102794313,LOC104966180,LOC103396000,LOC106528146,LOC108245529,LOC102232174,LOC103479388 coding downstream 55772 26000222 ~ 26046169 (+)
kcnab1b LOC103356881,LOC103395998,LOC101482076,LOC102213317,LOC102305142,LOC104919203,LOC101062207 coding downstream 128921 26073371 ~ 26115398 (+)
pask NA coding downstream 171482 26115932 ~ 26130177 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 14819 25916500 ~ 25916722 (+)
G117846 NA non-coding upstream 25225 25906115 ~ 25906316 (+)
G117845 LOC103356872,LOC107087289 non-coding upstream 26410 25904913 ~ 25905131 (+)
LOC120568898 NA non-coding upstream 42700 25880504 ~ 25888841 (+)
LOC120568900 NA non-coding upstream 58139 25872329 ~ 25873402 (+)
G117917 NA non-coding downstream 113804 26058254 ~ 26065839 (+)
G117933 NA non-coding downstream 260161 26204611 ~ 26204830 (+)
G117938 NA non-coding downstream 263906 26208356 ~ 26208871 (+)
G118009 NA non-coding downstream 369815 26314265 ~ 26314630 (+)
G118095 NA non-coding downstream 587716 26532166 ~ 26601409 (+)
G117829 NA other upstream 100846 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 137587 25773777 ~ 25793954 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 158073 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 887484 24987499 ~ 25044057 (+)
G117664 NA other upstream 977294 24950568 ~ 24954247 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other downstream 104339 26048789 ~ 26051099 (+)
LOC120568800 NA other downstream 269982 26214432 ~ 26217041 (+)
ece2a ece2,LOC103356888 other downstream 273548 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 450976 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 472058 26416508 ~ 26418008 (+)

Expression

acsl3b(LOC103356873,LOC102195906) Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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acsl3b(LOC103356873,LOC102195906) Expression in each Bioproject

Bar chart with 8 bars.
acsl3b(LOC103356873,LOC102195906) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network