LOC120568966 (LOC104919207,LOC103356876,LOC108245539)


Basic Information

Item Value
gene id LOC120568966
gene name LOC104919207,LOC103356876,LOC108245539
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 25972731 ~ 25988947 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816737.1
GGCGTTGCGCAGTGGAGTACAGCCGTCCGCCATCACTGCAtacaagctaacattagccaaaaTCCACTGAGAAGAGAGCGAGTGACAACAACATAACAGACCGACCTAATTCCTGAAGGGGAGGTCGCTGAGTTTCTCTGCTGCTTTCCTTGCGTAGAAAACAAACTAGCAACTGCCTTTCATGTAGTCTTAAAGTCAACTTAGAAACGAAAGTCGTTCTAACTAATCATGTCCAACCTCAAAGGCGGCACCAAGAAGGACACCAAGATGAGGATACGAGCCTTTCCTATGACAATGGATGAGAAGTATGTGAACAACATCTGGGACCTTCTAAAGAATGCTATCCAGGAGATCCAGAGGAAGAATAACAGTGGGTTAAGCTTTGAGGAGCTGTACAGGAATGCCTACACCATGGTGCTCCACAAGCATGGGGAAAAGCTCTACACAGGCCTGAGGGAGGTCGTCACAGAGCACCTCATCAACAAAGTACGGGAAGATGTCTTAAACTCTCTAAATAATAACTTTCTGCAAACACTGAATCAGGCCTGGAATGACCATCAGACTGCCATGGTTATGATCAGAGACATCCTCATGTACATGGACCGGGTCTATGTTCAACAAAACAATGTGGAGAATGTGTACAACCTCGGCCTCATCATATTCAGGGACCAGGTGGTGCGCTACGGCTGCATTCGAGACCATCTACGACAGACGTTACTGGACATGATTGCTcgtgagaggaagggagaggttGTAGACAGGGGCGCCATCAGAAACGCCTGCCAGATGCTGATGATTCTTGGCCTGGATGGCAGGTCTGTATATGAGGAAGACTTTGAGGGTCCTTTCTTAGATATGTCAGCGGAATTCTTCCAGATGGAGAGCCAAAAGTTCCTAGCAGAAAACAGTGCCAGTGTCTACATTAAGAAGGTAGAGGCCAGAATCAATGAAGAGATAGAGCGAGTTATGCATTGCCTCGACAAGACTACAGAGGAGCCCATTGTCAAGGTGGTGGAAAGGGAGCTAATTTCTAAACACATGAAGACCATTGTGGAGATGGAGAACTCTGGCCTGGTTCATATGCTCAAGAACGGCAAGACAGAAGACCTGGCATGCATGTACAAGCTGTTTAGTCGTGTGCCAAATGGCCTGAAAACGATGTGCGAGTGTATGAGCTCTTACTTGAGGGAGCAAGGAAAAGCTCTGGTGTCAGAAGAGGGAGAGGGCAAGAACCCTGTCGACTATATCCAGGGACTGCTAGACCTCAAGACACGATTTGATCGTTTCCTCCTCGAGTCTTTCAACAATGATAGACTCTTCAAACAGACCATAGCAGGAGACTTTGAGTATTTCCTCAACCTCAACTCCCGCTCCCCAGAGTACCTATCACTCTTTATTGATGACAAGCTCAAGAAGGGTGTCAAAGGGGTTACAGAACATGAGGTGGAGGTAGTCATGGTTTTTTTGTTTATGCAGGAGAAGGATGTGTTTGAAAGGTACTACAAGCAGCATCTGGGCCGCAGGCTGCTCAGCAACAAGAGTGTTTCAGACGACTCAGAGAAGAACATGATCTCCAAGCtcaagACAGAATGTGGCTGTCAGTTCACCTCGAAACTGGAAGGGATGTTTAGAGACATGAGCATCTCCAACACTACCATGGATGAGTTCAGGCAACACATACAAACCACGTCGGCATCTCTAAGTGGTGTGGACCTCACAGTAAGAGTCCTCACTACTGGTTACTGGCCTACACAGTCGGCAACCCCCAAATGCACCATCCCCCCTTCTCCCAGACACGCCTTTGAAGTCTTTAGAAGGTTTTACCTCGCTAAGCACAGTGGTAGACAGCTCACACTGCAACACCATATGGGCGGGGCAGACCTAAACGCAACTTTCTATGGAGCTATTAAAAAGGAGGACGGTTCAGAGGTGGGTGTGGGAGGGGCTCAGGTGACAGGCTCCAACACCCGGAAGCACATACTGCAGGTCTCCACCTTCCAGATGACCATCCTCATGCTCTTCAATAACAGAGAAAAGTGCACTTTCGAGGAGATCCAACAGGAAACGGATATTCCTGAGCGGGAGTTAGTGCGAGCGTTGCAGTCTTTGGCCTGCGGGAAGCCGACGCAGAGAGTTCTCACCAAGGAGCCAAAATCTAAGGAGATTGAGAGCGGCCACGTGTTTACAGTTAATGATCAGTTTACTTCCAAACTGCACAGAGTCAAAATACAGACAGTTGCTGCTAAACAAGGTGAATCAGACCCTGAAAGGAAGGAGACGCGGCAGAAAGTGGATGATGACAGGAAGCATGAGATTGAGGCAGCCATTGTCCGAATCATGAAGTCGAGGAAGAAGATGCAGCACAATGTCCTGGTGGCGGAGGTAACTCAGCAGCTCCGAGCACGTTTTCTTCCGAGCCCTGTTGTAATTAAAAAGCGTATAGAAGGACTAATAGAAAGAGAATACTTGGCAAGGACGCCAGAAGATCGCAAAGTGTACACCTACGTTGCATAGAAGATGAACTGTGgatgagaggaggaagagactggattgggggggcgggggcgggatttgttgttttctttggaCTGTTGTTACGCATGGACTGGAAGTTTCTTTTAAAGACAAATGCTGGGAACCTGATTCATCCTCCCTTACAAAAACACAGTAAAACGCATAAATGTGGGAAGAAAATGTCAGCgcaggaaaaaaaatccatcaaaACTTGTAGATGATTTTTAAATCAGGCCCAGTCTTCCTATTCCCTGTGAGTTTTAATATGGATGGATCCAGCTTCAAGCTTTTCACTGTTTTACCCTTGTAGAGATCAAACTTGCAAAGAATCCCTTGGGAAAATGTGAATGCACCACATTATTTTTGTTTcaatactgtataaaaaaaaataataaaattattaaaaacagcAAA

Function

NR:

description
PREDICTED: cullin-3

GO: NA

KEGG:

id description
K03869 CUL3; cullin 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816737.1 True 2928 mRNA 0.47 16 25972731 25988947

Neighbor

gene id symbol gene type direction distance location
LOC120568965 LOC104919208,LOC101171526,LOC104966176,LOC103396005,LOC101079252 coding downstream 4311 25963373 ~ 25968420 (-)
pax3a LOC103356872 coding downstream 54958 25895638 ~ 25917773 (-)
LOC120568225 LOC103359193 coding downstream 836772 25114378 ~ 25135959 (-)
LOC120568128 col4a3,LOC103359191 coding downstream 887382 25055225 ~ 25085349 (-)
LOC120568136 NA coding downstream 970949 24997381 ~ 25001782 (-)
LOC120567824 LOC106676181,LOC105890570,LOC105912786,LOC106632393 coding upstream 63152 26052099 ~ 26058572 (-)
map6d1 NA coding upstream 206896 26195843 ~ 26203560 (-)
mul1a mul1 coding upstream 336541 26325488 ~ 26330262 (-)
vwa5b2 vwa5b2,LOC104957800 coding upstream 345493 26334440 ~ 26348151 (-)
eif4e2 eif4e2,LOC102778094 coding upstream 403942 26392889 ~ 26400884 (-)
G117890 acsl3,LOC102195906,LOC108245538,LOC100696941,LOC102792450,LOC103356873 non-coding downstream 34221 25937605 ~ 25938510 (-)
G117875 NA non-coding downstream 100478 25871325 ~ 25872253 (-)
LOC120568899 NA non-coding downstream 142867 25828793 ~ 25829864 (-)
G117813 NA non-coding downstream 377974 25594273 ~ 25594757 (-)
G117812 NA non-coding downstream 379146 25593043 ~ 25593585 (-)
LOC120568967 NA non-coding upstream 465 25989412 ~ 25992209 (-)
G117899 LOC103356880,LOC101482764,LOC104966182,LOC107087304 non-coding upstream 59983 26048930 ~ 26051078 (-)
LOC120567720 NA non-coding upstream 75642 26064589 ~ 26086344 (-)
G117957 NA non-coding upstream 108646 26097593 ~ 26102089 (-)
G117993 NA non-coding upstream 204060 26193007 ~ 26194884 (-)
G117732 NA other downstream 1049413 24922203 ~ 24923318 (-)
G117560 NA other downstream 1436235 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2116110 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 2481119 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 2541739 23430366 ~ 23430992 (-)
camk2n1a camk2n2 other upstream 326823 26315770 ~ 26319595 (-)
G118175 NA other upstream 672674 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 830891 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 1654380 27643327 ~ 27675360 (-)
G118524 NA other upstream 1724520 27713467 ~ 27718759 (-)

Expression


Co-expression Network