LOC120568976 (leprot)


Basic Information

Item Value
gene id LOC120568976
gene name leprot
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14416830 ~ 14420197 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816753.1
GGCAATGGTGCTTAAATGTCAGGCAGACTGCTAAGCTACTGTCGCTTTAAGACACCTGATGATGACAAAGAAGGAAAACCCCCATGGAGGAAGCAGGAAGTTCGTTTACCAAGAAGGAGAGCaaataaacctgaaataaacaatacacaaaGCACAGAGCAAAAGTTTCACACCTTCATCGCAATGGCTGGCATTAAAGCACTGGTTGGGTTGTCCTTCAGTGGTGCCATTGGACTAACATTTCTTCTTCTGGGCTGTGCACTGGAACAGTACGGGGTATACTGGCCGCTGTTTGTCCTGATTTTCTATATATTAAGCCCCATCCCAACCTTCATATCCAGACGCCTCAGTGATGACACTGACTCGTCCAGCAATGCATGCAGAGAGCTGGCCTACTTCTTAACAACTGGCATTGTGGTATCATCTTTTGGGCTTCCCATCGTGCTAGCCCGCACTAGCACAATCCAGTGGGGTGCTTGCGGTCTGGTGATGACAGGAAACGCTGTCATCTTTCTCACTATCCTTGGCTTCTTTGTCGTGTTTGGAGGTGGGGACGACTTCAGCTGGGAGCAGTGGTAGAGTGCCGtcagacagtggatagacagaaGGTCagatggacggatggatggatggatgggtgggtaGGTGGAGAGTTGAATGGATAGAGAGCAGACTGAGGCGCACGTGTCCTGCACTGAGGGGTGATGCTCATGTACAGTGTACGctgcaaaatgtcaaaatgactGGGTTTTCAGGTCGATTTTTATATTTAAGAGTATCTGGGTTGGAGACAACACTATGTGCCCTATTAATGTGCCTTATGTCTGGGACTAGAAAGACACTGATGCCTATCCAGCTAAACCCATGTATTTTTGCTTGCCtcgcttttatttcaaaccCCAAATCACCCCGCTTATTGCTGCTGCCTGCAATTTCATTATGCTTCATATAATCAATATAAAGGAATCCTGAAGAGTGACTCTATTGTAATGTACACTGCAATGCTCACTGCATTATCTGTCCTCATTGTTCAAGGGGGAAGTAGCTATACTGAATTATGGCTTGCTTATTATGAGCACTGTTTGCTGTTTAAAGTGTGACGGCGGGGCATCTTGTCTTAATCCATGCTATCTGACAACTAGTTGAAGGATTCCTCATCAGGTAAAGATATATTTGTATGGAGatgatgtgttttttgttttcattttgctaCAAGActttaaagccttttttttgttgttctggTGCAATTGTTTACAGTACATTCTCACCAAAGATCATTTTAGAGTGCAACATTGAGGCATATTTTTCACCGCTGAACTGTATTGATCTGTGCTATGCAGTAATATGATTGGAAGAAAGCGCTGTTTAGTGAAAATCATACATCTAAGTGTCTATGTTCAGTTATTGTGTGAACAGGCCAGATAAATCACCCATATCCATTTTATATTCCTGCAGACGAAAACGGAAATCCTACTACTGACAAGAGCATGATATTAATTTACGTATGCTATTTTGCCATGTTGAATGGCAAACTCATTCATAAGTGCCTGTCATCCACAGTGTGTATTTTGATTAATAGAAAAATCACTGTGA

Function

symbol description
leprot Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and negative regulation of growth hormone receptor signaling pathway. Predicted to be located in Golgi membrane and endosome membrane. Predicted to be integral component of membrane. Predicted to be active in endosome. Is expressed in pharynx and pronephric duct. Orthologous to human LEPROT (leptin receptor overlapping transcript).

NR:

description
PREDICTED: leptin receptor gene-related protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816753.1 True 1596 mRNA 0.43 4 14416830 14420197

Neighbor

gene id symbol gene type direction distance location
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding downstream 2130 14355617 ~ 14414700 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding downstream 67271 14339669 ~ 14349559 (-)
LOC120568148 NA coding downstream 86239 14321679 ~ 14330591 (-)
LOC120568246 lrrc52,LOC102792645 coding downstream 104020 14304478 ~ 14312810 (-)
angptl1b LOC103365434,LOC104967899,LOC101486078 coding downstream 132111 14273842 ~ 14284719 (-)
LOC120567626 LOC103364420,LOC104948953 coding upstream 2285 14422482 ~ 14429558 (-)
LOC120568914 LOC104950559 coding upstream 9892 14430089 ~ 14436206 (-)
LOC120568348 lrp8 coding upstream 41275 14461472 ~ 14537465 (-)
LOC120567737 NA coding upstream 130840 14551037 ~ 14553669 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding upstream 141310 14561507 ~ 14564705 (-)
G114518 NA non-coding downstream 96067 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 245356 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 361307 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 468715 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 788163 13625776 ~ 13628667 (-)
G114538 LOC104949927,LOC103364340 non-coding upstream 20684 14440881 ~ 14447933 (-)
G114544 NA non-coding upstream 97279 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 269260 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 273435 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 331048 14751245 ~ 14751528 (-)
tfr1a NA other downstream 448019 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 934605 13469531 ~ 13482225 (-)
G114152 NA other downstream 1328267 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1441502 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1648205 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 193416 14613613 ~ 14618224 (-)
G114680 NA other upstream 375721 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 869885 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1723963 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1762457 16182654 ~ 16201698 (-)

Expression


Co-expression Network