LOC120568980


Basic Information

Item Value
gene id LOC120568980
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31431806 ~ 31453460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816757.1
acaaagctgaatgctaaatcggtgaagtatccctttaagtaaagCGAGGGACGGGACAGAAGCAAGAAGCATTCAAtatgtgaataaataaatgagcagAACGCCTTCAAATACACCTAGATACACATCCTTAGTGCTGATGTTCAACTCACAAGTTTGAATAAAATGCCATCAGTTGAAAGCAGAACAAAAAGCTCCCGCACTTCCACCGTCGGAACCGAATCCGTGTGACACCCAGCGGAAGTAAACAACACAAGTACCCGTGGCGGTAGCTATGGGCGGTAGCTGCATGCTGCTGCTGACTAGTGCAGGTCATTCTTTCAGCTGGAACTAAGCAACGATGTCTCCAGTTGAGTCTCTGAGAGAGTTTGTCACCGAGCgactaactgctgctgctgaagaaatCTTCCGAGTTGTTGAAGAAACTATCGCCGAGTACGAGAAGGAGATCGCTCGGCAGCGCAGACTGCTGGAGCTCGTTTGGAAACCCGAAATCAAGTTACACAGGATAGaGCTCCCACAGCAACATGTCTGTAAAGAGGAGGAGATTCTCGCTGACCAAGAGGACTCAGAGCTTCCAcagattaaagaggaacaggaggaactgtgcaccagtcaggagggagagcagcttgtaCTGAAGCAGGAGACTGAACATGACCACAGTGAAGGTCAGACTCTGACCTTCAATCCTGATGACACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCAACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTAATGATGCTGAGAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACTCAGGATCATCACGTAATGCAGAACTAGAACCAAAAAAGAGACATCACAAGAGCAGTAGTCACAGTAATAATGTAAACAACACTAACTTGTCAGAGATCCACTGTAATACTCAAACAGGTAAACAGTCTTTCATATGTGACACATGTGGGAAAGACTTTAAGTATAATTCAGCATTTCAAAGACACTTGAGAgtccacacaggtgagaagccatATTCTTGCAAAACATGTGGAAAAGATTTTGGACGTAGAAATCACTTGGAAATTCACATGAGAACCCACACAGGTGAGAGGCCGTACGTTTGCAAGATCTGCACTAAAACATTCTGTGATGTCTCAGCATTAATAAGGCATATGAAAATCCACACCGGTAAGAAGCAATATTCTTGCAAAACATGTGAAAAAGATTTTGGACGATATGATGAATGTAAAGaccacatgagaatccacacagatGAGAAGCCGTATGCTTGCAAAACATGTGAAAAAGGTTTCAGACATAATAGTACATTATTGGCCCACATGAGaacccacacaggtgagaagcccTATTTTTGCAAAACATGTCAAAAAGATTTCCGGCAATATAGTGCCTTGGTGGTCCACATGAGaacccacacaggtgagaagccatATTCTTGCAAAACATGTGGAAAACATTTTCGACAAAATAGTGCATTGTTGGTACACGTGAGaacccacacaggtgagaagccatACATTTGCAAGACCTGCAGGAAAAGATTCTGTGACCCTTCAGGCTTATTTAAGCATATGAGAGTCCACACAAGTGAAAAGCCGTACGTTTGCAAGACCTGTGGGAAAAGATTCTTTGTTGATTCAGCATTGAAGAGGCATGAGAattcacacaggtgagaagctgTTTTCTTGCAAAACATAGAAAAGATTTTGGACAGAATAGTGGCTTGTTGGTCCACATGAGAACCCATACAGGTGAGAAGCTGTACGTTTGCAGGACCTGCCGGCAAAGATACTGTGACACTGTTAATAAGGCATATGAGAACCCATACAGGTTAAAATCTAAACTAATATTGATCCCTGGCCTCTGCAGtctacatgtcaaagtgtccttgagcaagtcactgaaccccaaattgctcctgATGGCTGTGCCAttggtgtgtaaatgtgtgtgaatgtttatctcatgagcaggtggcaccatGTATAGTAGCTAGAGTAGGAATGTGTGTTAATGGGGTGAATGGTGCCTGTACTGTATGAAGCAATTTGTTGCTAATGATGTAAACTTTATGCTTGTTGgttttgaaaaatgtccatttaCAAAGTATCTCAGGATCACTTGTAGTTTAAAGTTTAACAAGGACTTATTCATGTGACCAGGATTAGTGTTTGATAGTTCTATATGAAGCCTCCTGCACATCTTTGCAAGAAGTTTTTAATTATCGTATAAGAAGTTCTATTAAATGGGAATGTGCCTTCTTCTTGCtatttttaaacactagcttTTGTTTCTGACCAGATTCTTGTTTGATAAATGACAAATGATTGAATTTGTTTTTATCAGACTGTTTTGAAGAGTGTAATCAACTATGGAATGACTGCATGGTTTTGGAACCttgtatatctatatctattacCTATTTATTATTATCAAAATAAGTTAATGATTATTTGGTAAAGAAAGAAGTATGTTTAGGATCCCCAAAACACAGATTAATacactttaaaaacacacaatgaTCTAACcaacaaaatgaacaagaatTAACTTAAAATAGCCCTAGTCTTATATGATTTAACAGGAGTTATGAGGAAACAGTGTTGAGATTTATAATAACCTAACTTTCTGTATTGATCAAAGTATAGTATTAcaggtattttatctgctgaaccgttaacatttggaaaaaaacaactgattTAATTGTGCAAGCACATtactttcctttcatttgttttaaattcaacgagcaatgtgttgtattttagcagaatactgaaagcagcagaaaggcagaactgagtacgctttaaaatctgtttatttatcacaagtaaTATCATTATGGTGATATTCAACAACCTTAGggcatatcgcatattttcctcatatcgtgcagccctaataactaCCTTGAAATTGCAGAATAGTGTTGCAAaattttcatctgtatcatCTTTTAGTGTAATTTGTTTATGTTAATAGTTATTTCTTTCTAAATTATGTGATAATGTTATGTAGGCTAGTCATTGTTTTCCTCTTCATTCGACTAGTTTATTACTGAACCCAGCATAACGTGCCGCGCCGTCACATCATGCAccacccaccaccacaagttaactctcaacctgtgggaaacactacatacaaataaacatgtacataatttc

Function

GO: NA

KEGG:

id description
ko04144 Endocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816757.1 True 3214 mRNA 0.40 2 31431806 31453460

Neighbor

gene id symbol gene type direction distance location
LOC120567691 LOC107740693 coding upstream 420482 31007722 ~ 31011324 (+)
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 1213084 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 1374697 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 1385616 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 1398272 30031910 ~ 30033534 (+)
eif3f eif3f coding downstream 407270 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 475685 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 488743 31942203 ~ 32016352 (+)
mpz mpz,LOC102776110 coding downstream 578192 32031652 ~ 32051435 (+)
LOC120568430 LOC103373937,LOC105937883,LOC100694151 coding downstream 621616 32075076 ~ 32115947 (+)
G119253 NA non-coding upstream 2948 31428653 ~ 31428858 (+)
G119252 NA non-coding upstream 3226 31428377 ~ 31428580 (+)
G119244 NA non-coding upstream 23920 31407228 ~ 31407886 (+)
G119232 NA non-coding upstream 47571 31383939 ~ 31384235 (+)
G119228 NA non-coding upstream 69767 31361837 ~ 31362039 (+)
G119255 NA non-coding downstream 328 31453788 ~ 31454417 (+)
G119264 NA non-coding downstream 16134 31469594 ~ 31472518 (+)
G119265 NA non-coding downstream 22105 31475565 ~ 31475847 (+)
G119266 LOC103364416 non-coding downstream 23626 31477086 ~ 31489836 (+)
LOC120568739 NA non-coding downstream 155511 31608971 ~ 31610761 (+)
G119123 NA other upstream 196241 31198960 ~ 31235565 (+)
G119114 NA other upstream 228220 31165226 ~ 31203586 (+)
LOC120568595 sdr16c5 other upstream 754454 30569095 ~ 30677352 (+)
LOC120567689 NA other upstream 1461893 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 3261836 28156801 ~ 28169970 (+)
G119257 NA other downstream 6404 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 412295 31865755 ~ 31869495 (+)
pip4p1a tmem55b,LOC101161334 other downstream 435448 31888908 ~ 31914704 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other downstream 614103 32067563 ~ 32071312 (+)
cadm3 cadm3 other downstream 674998 32128458 ~ 32226483 (+)

Expression


Co-expression Network