acin1a (acin1)


Basic Information

Item Value
gene id acin1a
gene name acin1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12665232 ~ 12684696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816761.1
TCGTCGCTCTCGCTGGGAACTGACTAGAGGAACGGAAAATGGCGGATCTCGAAGACGTTACGCTGGACGGGAGACCGCTACAGTCCCTTCGAGTAGCGGATTTAAAAGCTGCTCTTGAGGAGAGAGGACTCTCGAAAAGCGGTCAGAAGAATGCTTTAATCAAAAGACTCAAAGGGGCTCTTATGCTGGAGAATCTGCAGAGGACCTCCACCGCTCACATCGGACTGCAGCCAAACTCACAGATTGGTGAGGAAATGAGCCAGAACAGCTTCATCAAGCAGTATCTGGCTAAACAACAGGAGCTCCTGAGGCAGCGGCTGGAGAGAGAGGCTCGTGAAGCATATGACACAAATGAGCCAGAGGACCACACAGAAGTCAATAACAGTACATCATGCCCTCCTcaagcccagGATGCCACGCCAGCATTGGCTGAGCAGCACAAGCCACCTGGCCCCTCTGGTGGAGAGGGATTGTTTGGTGCAGTGAATGAGGGAGAGGGTAACAGGAACCAGGAGGCTGACATGTCCGGTCCTCCTGCTTCTGGCTCTGTGGCCATGCATGTTCCTGGTGGTGAGCACCGGCCAGAGAAGGGGTCTGCCTCCAACAAAGTTGCTGCTGACAGCGACGATGACGATAGTGAGGATGGCGAGGAGGATGGTGACGATGATGATTGGGAAAGCGGTGCTCGAAGGAGAGGCCACAGAGAGCCAGCCAAAGTGCCCACAACCAGAGAGAGGTCTGGAGCATCCTGTCAACCCCCGCAGCAGCACATGCCTTCCCTTTTGTCCCCTCAACTCCGCCAGCCGacacctcctccctccccacCTCCAGAGTTATCATTCCCCTTGCCTGACACCCCTAAACAGAGCCCCCCTAGTCCAGATGTAGCCCCAGCTAGGCGCTCATCCAGTACCTCTAGCTCTGGTTCATCCAGCAGCGGCAGCCGCAGTAGCAGCCCAGAGCCACAGAGGAGTGGACATGCAGAGCGCAAGCCGGGCCCGTTGACCCTTCTGGCACGTAAAATGGCATCAGAAGGTGCTTTTTCGGGAGCAGGTTGGCACCGCGGCGCTGGGGAAGGTGATAGGCAGGACAGCAGTACTCCAGCTACATCATTTCCTGGCAGAGGTCATCCAGAGGGTCTGGTATCTGCCATCACTCACACAGCCAATACTGCAGGCCATGTGTCATTTCCCATGATTTCAGGCACCCACCAGGGTATCACAGGAGCACATTCGGCCCATATTCAAGTACCTGTGAGTTTGCTCAAAGCCAATGCAGCagaagagagggacagagagagggactcTGAGATAGAAAGAGAAAAGGCCCTTGAGCTGGAAAGgcaagagaagcagagaaaactTGAGCAAGAACGAGCAATTGAGGAAGAGCGTGAAAGAGCTCTTGCactggagagagaggaaagagagagagctctggagaaagagagaattgAACGTCAGCAGGCCTTAGAAAGAGAAGAACGAGAAAAGGCTTTGCAGCGGGAGAGAGAACTTGCTCTAGAACGAGAGAGGCAGGAGAGAGAACTTGCTCTAGAACGAGAGAGGCAAGAGAGGGAACTAGCTTTGGCTAAAGAGAGGGAAGCGCGAGAGCAAGCCTTAGCACAAGAGAGGGCCCTGGAGCTGGAGAGGCAGAAGGAGCTTGAAAGACAGAGGGCCCTGGAGCATGAACGTCtgcagagagaaaaggaggagagggagaagcgagagagagaagaaatggAGCTAGAAAGAGCTAAGGCTTTGGAGCAtgaaaagaaggagagagaaagagctctTGAGCAAGAGAGGCTACAGAGGGAAATAGCTCTGGAGGCtgagagaaaggagaaggagaggattGAGAGAGAAAAGGCTTTGGAGCAGGaaaggttagagagagagaaagccttAGAGCGAGAGAGACTAGAGAGGGAGAAAGCCTTAGAGCGAGAGAGACTAGAGAGGGAGAAAGCCTTAGAGCGAGAGAGACTAGAGAGGGAGAAAGCCTTAGAGCGAGAGAGACTAGAGAGGGAGAAAGCCTTAGAGCAAGAGAGACTAGAAATGGAAAGAGCCCTGGAGAAAGAGCGACTAGAGAAAGAAAAAGCCATAGAGCAAGAGagaattgagagagagaaagagaaagcctTAGAGCAAGAGAGAATTGAGAAAGCCTTAGAGCAAGAGAGAATTGAAAGAGAGAAAGCCTTAGAGCGAGAGAAAGAAAGGTTGGAGCGGGAGAGAGCCTTAGAACAGAGGTTAGAGCTTgagaggaaggaaaaggagagaattgagagagagaaagcattgGAGCAAGAAAGGATAGAGAGGGAAAAGGCCTTGCAACGAGAgaaggaggaaaaagagagattgGAGAGAGAGGCCGCTCTGGAACAggtgaagaaggagaaggaaagagcagaaaaggagaggaaagagaggctggagagagagaaagctttAGAGCAGGAGAAACTTGAAAGGGAGAGAGCCTtggagaaggaaagaaaggagaagGAAAGGGCACTCAAACAAGAAAGGTTAGAGAAGGAGAAAGCAAtgcagaaagaaaaggaggagcaggagagggcCCTGGaacaggagaaagagagagctagGGGGACTGAGAAGGATAGGGAGAGTCACCTCCCTCCTTCCAAACGTGGCCGTGAGATTGGTCTCACCCCCCTGCCCactcctccccccctctccaCAGGACCAGGTAGAAAGTCATCGACAGAGGCAGGAGAGCAAGAAGATGTCCATGCTCCAATGTCCCGGCGTGAAGCAGCAGAATCCGGTGCACCCATGCCCGCAACACTTCCGTTGCCTCAGTCCTCATTCAAGAAATTCCGGTTCTTAAGGGACTCCCCAATTCAGCTCCAATCTTCCTCCCCTTCCATGGTCATAAAGCGGCCCCGTAACTTCTCTGATACCCCACAGCCTCGGGCCTCGCATGTTTCCTCCCTCACAGACGTCGGGGAGCGCCAGCAGGAAGGACTCCCGTCCTCCACTGAACCGGAAGATCCACAGATGCGGACAAAACAGGAGGTTGTTTCCGGAGCGCCGGGATCTGACGGGGCCCAGCCTGAGAAGGAGACCACTGTTAACACCGCGCTGGTCCCAAGTCCCAAAAAAGAAGGGGCCACCAGCCTAGTATTGGAGGACAAAGATAAAGCAGATTCTGTGAAGTCGGAACAGGCTGCCAAGGAATCCACCAAAAAAGCAAAAGAAGTGGATGAAAGCAAGGGTCCTACAAACCCAGTGGATACTGCTCAGCGGAGGGGAAGAGATGCAAACAAGGAAGAAAAACAAGGAAGACAAAGATCATCGTCTAATGATTCCTCTTCGTCAGAATCGGACTCCGGGTCCTCGTCTTCTCGGTCCTCTGGCTCATCCACGTCCTCTCAAGAGAAAACCTGCTCCACTTCAAGAGGCAGACGGGAAGGTAAACGTGAAAGAGATTCCTCACCACAGCACAGGGTGACACAAGAGGCTCAGGCTGAGGGTTTAAAGGAAACCCCAAAAGCCTCCCCTGGCAAAAGAGAGAGTAACACAACTGCTGATGGAGACAGTCACACCAAGAAACCGTTCATTGAAGCACCAACCAGAGAGGCGTCACAAAGGAAGAGAAAGGACAacgagagagaggaggaaacggACAAACAAAGGCAGTTGAAGGAGACTGCCATGGCAGAGCCAGAGAAGCTTCCAGAGACCAGTGAGGAGACACCAAAGGCCTTCTCAGCTCGTAAGATCTCTATTAGCAGCAGTAAATCGTCCCCAGGCACTGGCAGTGCAGAGGGGGAGCAGGACTCTGGGGCCGCGGCCGGTCGCAAGAGGAGGTGGGGCTCCAGCACAGCTGTCACTGCCAAGAAACCTTCCATCAGTATCACCACAGATTCACTCAAGTCTCTGATCCCAGACATTCGCCCGTGTCTCGGGCAGGAGGCAATAGTGGACCTGCACCCAGAGGAAGCTGTCCTCTCTGGTGCTGAGGACGAAGAGAGGGAGTGCTCTGACCAGGATCTTCAGATCCGTCGCACTGTCACACAGGTGGTGCACTCGGAGAGCCAGGagaatggagagaaagagacaaagaggagcAGACATGAGGAGTTGGAGGAGGATGACccacagggagacagagagatgacAACAAGGGTGCATGAAGAGAAGATGGACACCTCATTTCCTGGAGCTGTGGAAACGCAGTCTCCATCACATACCAGCCATGATGTAGAAACTAACACTGTGACCCCCAGCGAGACCCTCATTCGCCGCTCCATCAGCCAGCAAAAAACGGGTGTTTCCATCACAATCGACGACCCTGTTCGCACGGCCCGGCAGCCCTCGCCACCTCGCGGCAAAGTCTCCAACATTGTTCATATCAGCAACCTGGTGAGGCCGTTCACTCTGGGGCAGCTAAAGGAACTGCTCGGCAGAACTGGCACTGTGGTGGAGGAGGGCTTCTGGATTGACAAAATCAAGTCTCACTGCTATGTCACTTACGGTAGCTCAGAGGAGGCAGTTGCTACACGGGCAGCTCTTCATGGAGTGAAATGGCCTCAGAGCAACCCAAAAGTCCTTAACGTAGACTTCTGCCAGCAGGATGAGCTGGACTTCCACAAAGGCTTGGGTGTAGCTGGCAAACCCGGAGCAGAGGAACGGGCGCCTGGCTCTGGCCGTGGTCGAACATCGGCcctgccctctctcctccctgagCGAGACCAGTGGGCCGAGCGTGAGCGTGAGATGGAGCGCCGAGAGAAGGCTAGAGCAGAGCGGGAGTGGGATCGCGACAAGGTCAAAGAATTTGGGAAACCCGgtgaagagaaggaggaaggtCCCCGGAGGTCACGCTCCAGAGAGAGGCGCCGCAAGGAGAGGGGAAAGAGCAAggagaagaagactgagaagaaGGAGAAAATGGCTGAGGATCCCCCTGCAAAGCTGCTTGATGATCTGTTCCGCAAAACTAAAGCAGCTCCTTGCATATACTGGCTTCCACTTACAGaggaacagTTTGTCCAACGGGAAGCTGCCAAAGCAGAACGGATGAAGGAGCGTGAGAAACGGAGGAAGGAGcaagatgaagaggaggagaaaaaaagggaagaggAGCGCAAGGAGAGGGTGAAAGCTGGAGGCGGCCCAACTGGAGAGCGAAGTGAGGGTGAGAAGGAAAaggacagggacagagagagggacagagacagaggtagagacagagacagggagagggagagggagaatgaCAAACGCAGGGATGGCTACCGTAGGCCAGAGGGCCGTGGAGCAGGCGTGGGCAGACGCTCACGCAGCCGCAGCGACCCACGAGAAAGGCGACGTTAATGGCCAATCAACTGATGGAACTGTCCTAGAGACCACCCTCTTCCATTTGCCTTTCACTACATGTACTTTGTTACAACTAAGACCCAACAGAGGACCAACTGATGTCGTCACCATCTCTCAAATTGTCACCTTTTTTATTGCACATCTACACTTACACACAGTCAGGCTTAAAGGggaccatgttttttttttttttttttttgcggtgTTGTTTCCCAGAGTGCTGTATGTCGCACTTCTGTCAAGCTTTGATATATTTTCTTTATACttttgcctctttttcttaAATTTTTGTCTTGACGGTTTTGCAGTATGGCACGCTGGGTAATTTTAATAATTTCCCCTCATGTTCCCCATTTGCCCCAAAGTGTAGGTGCCAATTATGATTTGCAATCAACTGTTGTCGCCTCAGTGTTTTTAACAGCTCTAAAATCTGGATGAGGAATCCTTTTGTTGCTGCATGTAGTCCAAGGCTCTCCTTGCCAATCCTGCCTAAATAGAAAAATCTGCCCTCTGTGCAGAGGCTTGCATAAATCTGAAAATATTGGAATAGGTGTGTTTggcattttgtacagacatatAAGATTACTTAAAATCACGTCTTTAAATAAGGCAGCTCTGGGGTATTTTTGGACAGGTGTGGAATAACTACTAAGGCAATGCAGTGTTCCTCTCCCTGTTCAGTTAAGCGATGGCTCCGAATCTCCTTGGAGGAGAATCGATGTCTGTCACTTGACACAAGTTATGATTATGTCCTTATCATTGATTCTCttattcctccctcctcttcctccagttCTCTTACCCTGTAGCGTCAATACAGGCCCAAGAGGGGAGGTTGCATTATGAGTTTTCTaaccattttgtttttgttaccttttattttatcattttagtacaaaggt

Function

symbol description
acin1 Enables RNA binding activity. Involved in several processes, including apoptotic chromosome condensation; negative regulation of mRNA splicing, via spliceosome; and positive regulation of monocyte differentiation. Located in cytosol; nuclear speck; and plasma membrane. Part of ASAP complex. Colocalizes with exon-exon junction complex.

NR:

description
PREDICTED: apoptotic chromatin condensation inducer in the nucleus-like

GO: NA

KEGG:

id description
K12875 ACIN1, ACINUS; apoptotic chromatin condensation inducer in the nucleus

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816761.1 True 6259 mRNA 0.52 18 12665232 12684696

Neighbor

gene id symbol gene type direction distance location
si:ch211-14a17.10 NA coding upstream 2034 12632485 ~ 12663198 (+)
LOC120568617 rnf212b coding upstream 48622 12612142 ~ 12616610 (+)
LOC120568040 NA coding upstream 54074 12609157 ~ 12611158 (+)
zp3f.2 NA coding upstream 57088 12605394 ~ 12608144 (+)
slc7a8b slc7a8 coding upstream 84020 12565994 ~ 12581212 (+)
trim110 cbln3,LOC102310989,LOC102795120,LOC102215561 coding downstream 36020 12720716 ~ 12725372 (+)
cbln12 cbln3,LOC103360302,LOC104927970,LOC101077223,LOC104956581 coding downstream 40916 12725612 ~ 12728919 (+)
chd8 chd8 coding downstream 45749 12730445 ~ 12751968 (+)
tox4a LOC103360300 coding downstream 68339 12753035 ~ 12759269 (+)
LOC120568999 LOC104956575,LOC101467645 coding downstream 105151 12789847 ~ 12794774 (+)
G113852 NA non-coding upstream 37713 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 62310 12601183 ~ 12602922 (+)
G113811 NA non-coding upstream 308511 12356340 ~ 12356721 (+)
G113782 NA non-coding upstream 443548 12221376 ~ 12221684 (+)
G113778 NA non-coding upstream 455792 12208714 ~ 12209440 (+)
G113938 NA non-coding downstream 93644 12778340 ~ 12779398 (+)
G113956 NA non-coding downstream 176929 12861625 ~ 12874310 (+)
G114000 NA non-coding downstream 342383 13027079 ~ 13028170 (+)
G114008 LOC104953400 non-coding downstream 467403 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 511565 13196261 ~ 13198734 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 65392 12582642 ~ 12599840 (+)
LOC120568189 nop9 other upstream 498955 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 537210 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 1319007 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1778754 10885595 ~ 10886478 (+)
LOC120568152 LOC104963178 other downstream 216843 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 226743 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 244519 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 267852 12952548 ~ 12960349 (+)
col6a1 col6a1 other downstream 325879 13010575 ~ 13074594 (+)

Expression


Co-expression Network