LOC120568987 (LOC104934800,LOC103132244,LOC103479200,LOC103375024)


Basic Information

Item Value
gene id LOC120568987
gene name LOC104934800,LOC103132244,LOC103479200,LOC103375024
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7018394 ~ 7028668 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816767.1
AAGCACGGAAAGGCGTCGGTCGGTGAACGTGTTTCTCCGTTTAGGTTCTCTCCAGCCTGGCAGTCAGTGGACACACATACCGGACGAGACGAAGCAACATGAAGGACAACAGTTTGCCCCGAATTGTAGTTATTATCTTGTGCACGGTGGTTTTTATCGCCGTTGTAATTGTTAACGCTTTGGCTGGAGCGGGCAGAGGTCCTTTCCGTTCCACTACAGGTAATGTGTCGGGCCACTATGAGACAGACATCACTCCAGCTGGCTGGACCTTCTCTATCTGGGGTGTTATCTATACCTGGCTCACCCTGATGGTCCTATACCTCACTACATATGTATTCAGAGGATCCTGGGCTCAGTGTCTGCTGCCCTACTCCTTCTATTTTTGCTGGCTGTCCAACATGGTGATGAACGTGATATGGTTGCTGCTGTGGGATAGAGAGTTGATGCTAGCAGCTCTGGTTGTGTTAATCCTGATGGCGATCACCAACTACACTGCTTTGTTCTTCTGTTGCTTTGCCACCGATTACTACGGCCTCTGGTTACAGACGTACCATCGCAAAGACCTGGCCTGTCTCCGAATATTGGTCCAGAACGGTTTGGCTGTCTACACCACGTGGATTTCCATCGCTTCTCTGATCAACTTCTCGTTGGTTCTCCACCTGTGGGGGGTGGACCGGAGCACGGCGGCAACGGCTTCTCTGTGCATCCTGTTTGCCGAGGTGGCTGGATGgttcgTTCTCGAGAACTGGGTGCTGGACCGCTGGGTGCGTAACATCCTGACGGTGTACCCTGTGGTGATCGTGGCTCTGGTTGGGAACATCTTGAAGCATTTTCAGCCAGCTCATCCCACTCCAAATTCTGTGTTTATGGTTGTCCTGCTGGTGTTGGCGTGTGTCCTGCTGGTGTCCCGACTCTGTACCGTCATCTGGAGAAACAAATGGCGGCCCCTCCACTCCCCAGGCTCTGCACGGCTGATGATATCGCCCCTCGATGGCAGTAAATTCAAGATCTTCTCTTAAACAAGAGGAACTTGTACATTTTCCTCCTGTCCTGCTCTCAGGCCActcttaaatacattttcacacaagCCACTGCAATGCTCCCTGAGGTTTCAAACTCATGAAGGTGTTTAACTTGTCATGGATTTGCATAGACAACATGGATAAGAcctgtatttctttaaatagataaaaagaaagaaagtgttcAGAGTCTGTAATGGGAAGGCAAGAAAACATCTCTTTTCTCAAACTGCAATTTAGAAAATGCAAGACTTTCTTTGAAATATGAATAAACTGCTATAACTGTTTACCACTACTTACCATTAAGTTTTGCCTATTTTTAAAGCACTTTTTATACAAATGCATGCGTGTGCATTTCGTTATCATGTTTTGTATGGCTATTTTAAGGCAGTTTTATTGTTGCTTTTATTGCTTTCTTTATTTGTGTATCTATTCAGTGACAATAGACCATATACTGTCAATATATGTTGGCTTTTATACATtaccattttaataaaatatttgggAGCTTTTTGCTGCTAATTAAAGAATTCTTTTAAACATCCTAATGCTGTCTGCTTTTCTGAAGAAATGTATAAAATCTACTGCAAAAACACTATTTTGCTGAAATGCACAATAAAGATATATCGGTTCA

Function

NR:

description
hypothetical protein EH28_20575

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816767.1 True 1656 mRNA 0.45 7 7018394 7028668

Neighbor

gene id symbol gene type direction distance location
LOC120568998 LOC103370293,LOC103129992,LOC103396629 coding downstream 2524 7008121 ~ 7015870 (-)
LOC120568496 vipr2,LOC107383421,LOC102775707 coding downstream 150736 6803908 ~ 6867658 (-)
LOC120568072 NA coding downstream 242701 6773520 ~ 6775693 (-)
LOC120568070 NA coding downstream 249496 6765048 ~ 6768898 (-)
LOC120568067 NA coding downstream 254344 6761022 ~ 6764050 (-)
c11h5orf22 LOC104934799,LOC103375412 coding upstream 1417 7030085 ~ 7044538 (-)
LOC120568977 NA coding upstream 202133 7230801 ~ 7232421 (-)
LOC120567743 NA coding upstream 593446 7622114 ~ 7624108 (-)
paxip1 paxip1 coding upstream 713016 7741684 ~ 7767836 (-)
cnpy1 LOC103363935,LOC102314352 coding upstream 789079 7817747 ~ 7836946 (-)
G112654 NA non-coding downstream 11414 7006672 ~ 7006980 (-)
G112652 NA non-coding downstream 13012 7004164 ~ 7005382 (-)
G112648 LOC106604074 non-coding downstream 19469 6995058 ~ 6998925 (-)
G112617 NA non-coding downstream 69262 6874665 ~ 6949132 (-)
G112579 NA non-coding downstream 148924 6731759 ~ 6869470 (-)
G112683 NA non-coding upstream 29779 7058447 ~ 7058835 (-)
G112716 NA non-coding upstream 580232 7608900 ~ 7610234 (-)
G112738 NA non-coding upstream 681942 7710610 ~ 7734376 (-)
G112764 NA non-coding upstream 773672 7802340 ~ 7802552 (-)
G112778 NA non-coding upstream 827004 7855672 ~ 7855889 (-)
si:ch211-267e7.3 LOC103370300 other downstream 28272 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 281882 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 839508 6172281 ~ 6178886 (-)
G112328 NA other downstream 1165947 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 1272313 5723733 ~ 5746081 (-)
cdh6 LOC103366829,LOC104926815 other upstream 47941 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 1458799 8487467 ~ 8487539 (-)
G113070 NA other upstream 1751784 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 2085716 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 2372119 9400787 ~ 9510497 (-)

Expression


Co-expression Network