LOC120568998 (LOC103370293,LOC103129992,LOC103396629)


Basic Information

Item Value
gene id LOC120568998
gene name LOC103370293,LOC103129992,LOC103396629
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7008121 ~ 7015870 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816778.1
AAAGAAGAGGAAGTGAAGAAGTGAGGAAGTGGCAGCGCTGGTGGAAAACTGACTACTGGACAGCACGGTTGCTAGTGTCTGCTGTCCATAACGGCCGCCTTGCGTTGAACAATCGTTACTATCGTGtccaaaaatgtctaaaaactcACTTTCCGACCGGTTTAGGAAAGTAGACGTTGATGAATACGACGAGAATAAGTTTGTGGAcgaggaagaaggaggagagaacCAGGGAGGTCCGGACGAAGCAGAAGTAGACGCTTTGCTCAGACAGGGGAACATGAATGCAGCTCTCCAAGCAGTGCTAAAGAATCCTCCAATCAACACCAAGAACCAGGTCGCCAAGGAGCGAGCCGAGCAGCTGGTGGTCAAAGTGCTGAGCAGTTTTAAGAGCGGCGACATAGAGAAGGCCGTGGGCTCGCTGGACAAAGCTGGAGTGGACCTGCTGATGAAATACATCTACAGAGGCTTCGAAACCCCGTCGGACAACAGCAGCGCCGTGCTGCTGCAGTGGCATGAGAAGGCTCTGGCGGTGGGGGGAGTGGGCTCTATTGTCCGAGTCCTGACTGCCAGGAAGACGGTCTGATCCTCGCAGGAAGTCCTTCTGCCAAGCGGGCATTAGACAGTCATCTGGCCAAACACCAGATCACCGGGCCTTCCTGTTTTTTGGACATGATTCCTGTTTATTTTTATACTGAAGCCGAGTGCCCTCCGCAGTTCTTTcctctgttttttcttcttctccttcttcttctgcaTTCACTATTTTCAATCACACCTCTGGAATTTAGaagtgcagacagacagacagacaggcagacagacagacaggtgctgGCACCTTaaactgtctctgtgtgtgtgtgtttgtgtgccagcCAGCcatgcagagagagaacagacacATTTCAGACGCTTGACTCGGACACAATCTCGCCAAAGCAGCTCtacgctcttttttttttttttctcttttcttctccaaaCTGCCTCCCTGCTGCTCCGATGCCTCagcgctcctcctcctcctcctcctcctcctcctcctcctcctttctctccgAGTCATCCAGGTTGAGGCGTTTGCTCCTGAATGGGCTGCCAGAGACTGGAGACTGGGTTTTCCCTGCCTTTtgcccagtgcatgctgggattggagtgctttttttcttttcccctcaTCTTTTTTCATCATTCTAACATTGTGAACTTCTTTGATtgttgactcttttttttttttttttacttacacCACATTGTTGTGTGTAGCCTGGCTTACATTGGGGTTTTTATATCTGAAAGAAGCAACAAAATAAAGTACTAAAGCCAAGGCTCtaataaatgtttgtttaattcATGCAACAAATGCAACATTTCCTTATTTTCTCATTCGCTTTAAGCTTATGTCTATAATTGATTAAAGACCACAAGAAAACATCATGCCCAAGCTACCAGCTAGCTTATATTATTGTGTATAATTTGGAGTTGCACCTTGTCGATTATTTTGTCGATCAgttatttggtctataaaatgtcagaaaattgtgaaaaa

Function

NR:

description
PREDICTED: actin-related protein 2/3 complex subunit 5-like

GO:

id name namespace
GO:0030833 regulation of actin filament polymerization biological_process
GO:0005856 cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816778.1 True 1552 mRNA 0.47 4 7008121 7015870

Neighbor

gene id symbol gene type direction distance location
LOC120568496 vipr2,LOC107383421,LOC102775707 coding downstream 140463 6803908 ~ 6867658 (-)
LOC120568072 NA coding downstream 232428 6773520 ~ 6775693 (-)
LOC120568070 NA coding downstream 239223 6765048 ~ 6768898 (-)
LOC120568067 NA coding downstream 244071 6761022 ~ 6764050 (-)
LOC120568073 NA coding downstream 247985 6757854 ~ 6760136 (-)
LOC120568987 LOC104934800,LOC103132244,LOC103479200,LOC103375024 coding upstream 2524 7018394 ~ 7028668 (-)
c11h5orf22 LOC104934799,LOC103375412 coding upstream 14215 7030085 ~ 7044538 (-)
LOC120568977 NA coding upstream 214931 7230801 ~ 7232421 (-)
LOC120567743 NA coding upstream 606244 7622114 ~ 7624108 (-)
paxip1 paxip1 coding upstream 725814 7741684 ~ 7767836 (-)
G112654 NA non-coding downstream 1141 7006672 ~ 7006980 (-)
G112652 NA non-coding downstream 2739 7004164 ~ 7005382 (-)
G112648 LOC106604074 non-coding downstream 9196 6995058 ~ 6998925 (-)
G112617 NA non-coding downstream 58989 6874665 ~ 6949132 (-)
G112579 NA non-coding downstream 138651 6731759 ~ 6869470 (-)
G112683 NA non-coding upstream 42577 7058447 ~ 7058835 (-)
G112716 NA non-coding upstream 593030 7608900 ~ 7610234 (-)
G112738 NA non-coding upstream 694740 7710610 ~ 7734376 (-)
G112764 NA non-coding upstream 786470 7802340 ~ 7802552 (-)
G112778 NA non-coding upstream 839802 7855672 ~ 7855889 (-)
si:ch211-267e7.3 LOC103370300 other downstream 17999 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 271609 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 829235 6172281 ~ 6178886 (-)
G112328 NA other downstream 1155674 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 1262040 5723733 ~ 5746081 (-)
cdh6 LOC103366829,LOC104926815 other upstream 60739 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 1471597 8487467 ~ 8487539 (-)
G113070 NA other upstream 1764582 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 2098514 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 2384917 9400787 ~ 9510497 (-)

Expression


Co-expression Network