wnt9a (wnt9a,LOC106599874)


Basic Information

Item Value
gene id wnt9a
gene name wnt9a,LOC106599874
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21133002 ~ 21151186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816859.1
ATTTTACACAGCTACTCAGGAGAAACGAAATGATCTGCCCTGGAGCCGCAGCAAAATGCTGGATGGACACCTACTCCTGGGATGGTTATCGTTCACTGTCATAGTGTATCTTCTCAACTTGCCTGGACCAACCGCAGCATATTTCGGGTTGACAGGTAATGAACCGTTGTCTATCCTGCCACTGAACTCTCTACCAGAGGAGAACGTGGGCAGGGCCCACTACAAGCTGTGCGACCGTCTCAAACTGGAGAAGAAGCAGCGCAGGATGTGCAGACGAGACCCGGGCGTGGCCGAGACCCTGAGAGAGGCCATCACCATGAGCGCCCTAGAATGCCAGTATCAATTCCGCTTTGAGAGGTGGAACTGCACCTTAGAGGGGCGCCACCGAGCCAATATATTAAAGAGAGGATTTAAAGAGACAGCCTTCCTGTATGCCATCTCCTCGGCAGGCCTAACCCATGCGATGGCCAAAGCTTGCAGCGCAGGACGCATGGAGCGCTGCACGTGTGATGAGGCCCCGGACCTGGAGAACCGCAAGGCGTGGCAGTGGGGAGGCTGCGGAGACAACCTCAAATACGCAAACAAGTTTGTCAAGGACTTCCTGGGCAAACGATCCAACAAGGACCTGCGCGCACGTGTGGACATGCACAACACAAATGTGGGCATGAAGGTAATCAAGGCCGGAGTGGAGACCACTTGCAAATGCCACGGCGTCTCCGGCTCCTGCACCGTCCAGACctgctggaggcagctcctgcCCTTCCACGAGATCGGCAAGCAGCTGAAGCAGCGCTATGAGACCTCCATTAAGGTCGGCAGCTCAACCAACGAGGCCACGGGGGAGGGAGAGATCTCCACAGGCCggagccagcagcagcagcagcagcagcaacagctacaacaacagcaacaacagcagcagcagcagcagcagcccgtGCCTGCCCTGAACGATCAGATCCCTCGCACTATGGACTTGCTGCACATTGAGGACTCGCCCAGTTTCTGTAGACCCAGCAAGTACTCGTCGGGCACGGCAGCCCGTAAGTGCTATAAGGACAAGAACTGCGACGCAATCTGCTGCGGGCGAGGCCATAACACTCAAAGTAGGGAGGTGACCCGGCCCTGCCAGTGCCAGGTGCGCTGGTGCTGCTACGTCGAATGCAAGCAGTGCACACAGAGGGAGGAGGTCTATACCTGCAAAGGGTAAACGCTGTCAGCCCCTACAATCAGTGGAGCAGGAAAGATGGTTGTGTTGAAGAGGagtggttgttttgtttttaaacaagATTTTGCTTCCACTGTCGGAACAGTGTTCTGCACACAAAAGAGGAGCGAGCTGATGGAGGAGCAATAAGCACTTTGAGGGATTTCTGTGGGTTGTGTTTCAGAGATCCTGTGGCCCCTGTGTCTGGGGTttgcagattaaaaaaaaaacttctcagacaaCTGGGTCAACATctcaagccttttttttttttttttttttt

Function

symbol description
wnt9a Predicted to enable cytokine activity and frizzled binding activity. Acts upstream of or within hematopoietic stem cell differentiation; pharyngeal system development; and skeletal system development. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including gut; head; nervous system; pectoral fin; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human WNT9A (Wnt family member 9A).

NR:

description
PREDICTED: protein Wnt-9a

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K01064 WNT9; wingless-type MMTV integration site family, member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816859.1 True 1490 mRNA 0.54 4 21133002 21151186

Neighbor

gene id symbol gene type direction distance location
jmjd4 jmjd4,LOC102786139 coding downstream 79226 21051339 ~ 21053776 (-)
ccdc13 NA coding downstream 126875 21001980 ~ 21006127 (-)
myl13 myl3,LOC105919861,LOC102217899,LOC107395748 coding downstream 209338 20920596 ~ 20923664 (-)
LOC120569019 aqp1,LOC103358082,LOC101079855,LOC104917699 coding downstream 314838 20815649 ~ 20818164 (-)
thoc1 thoc1 coding downstream 333457 20792744 ~ 20799545 (-)
c11h1orf35 LOC104963886,LOC103374549 coding upstream 46107 21197293 ~ 21201627 (-)
LOC120568841 NA coding upstream 62480 21213666 ~ 21268376 (-)
atg9b atg9b coding upstream 122198 21273384 ~ 21284939 (-)
asic1c asic3 coding upstream 152175 21303361 ~ 21322484 (-)
agap3 agap3,LOC102197517 coding upstream 298251 21449437 ~ 21571620 (-)
G116582 NA non-coding downstream 25284 21107514 ~ 21107718 (-)
G116580 NA non-coding downstream 71762 21058592 ~ 21061240 (-)
G116525 NA non-coding downstream 213286 20918969 ~ 20919716 (-)
G116508 NA non-coding downstream 305291 20827512 ~ 20827711 (-)
G116499 NA non-coding downstream 326311 20806153 ~ 20806691 (-)
G116651 NA non-coding upstream 57556 21208742 ~ 21209773 (-)
G116692 NA non-coding upstream 146229 21297415 ~ 21300082 (-)
G116743 NA non-coding upstream 441553 21592739 ~ 21595306 (-)
G116758 pcmtd1 non-coding upstream 507493 21658679 ~ 21660467 (-)
G116832 NA non-coding upstream 659676 21810862 ~ 21811146 (-)
higd1a higd1a other downstream 122426 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 137435 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 1337243 19793342 ~ 19795759 (-)
G116138 NA other downstream 1667622 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1910276 19221791 ~ 19222726 (-)
G116969 NA other upstream 1110812 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2194532 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 2279180 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 2317434 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 2699887 23851073 ~ 23856621 (-)

Expression


Co-expression Network