imp3 (imp3)


Basic Information

Item Value
gene id imp3
gene name imp3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15549860 ~ 15553969 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816860.1
agaagaagaacacgtgTTTCCTGTGTTTCCTCTTCCCCCTGCATGGACAGGAGCATAGGAGTCTGCATTGTAAATAAATTGCATTCAGCCAGCGAAAGGTTTAAAAAATGGTGCGTAAATTAAAGCACCATGAACAGAAATTGTTGAAGAAGGTGGACTTCATCAACTGGGAGGTGGACAACAACCTGCACGAGGTCAAAGTGTTGCGGAAGTATCGCATCGAAAAAAGAGAGGACTACACCAAGTACAACAAGTTGAGTCGTAACATCAGAGATCTCGCCCAGAAAATCAGAGACCTGGATGAGAAAGATGGCTTCAGAGCTCAGAGCACACATCAACTACTGGAAAAACTGTACAGTATCGGTCTCATGCCCACCAAACAGAATCTGTCCCTCACAGAGAAAGTCACAGCTTCGTCATTCTGCAGGAGGAGGCTGCCCAGCATCATGCTGAAACTCCGGATGGCTCAGAACCTGAAGACGGCCATCACCTTCATCGAACAAGGACATGTGCGTGTTGGCCCAGACATAGTCACAGACCCAGCTTTTCTCGTCACAAGAAATATGGAAGATTTTGTTACTTGGGTGGACTCCTCCAAGATCAAGCAGCATGTCATGAATTATAATGATGAGAGGGACGACTTTGATCTGGTGGCATAAGACTTTTGTCTTACATCCATTCATCACCCTGGAGGATAGGAAAGGGACCGTACTCTGCTCTTGTAACTATGGCGCGAATAACTCTACAACCCAGGAGTCAACAGTTCAAATCTCTTATCAACTTGGAAATTGTGGCAAGAAAATAAGTGCTTTCGCCTTCTTAACAAAAACTAACTGAGCAAGGACAAAGGAACACACTTCCAGGATTCACATTGTCACCAAACACCTCTTTTGTCAAAACTAAAATCGGATCTATTGACAGTTAACCATCCAAAATATGTTATCTATTCTCCTATGCCTCCTTGTTGTTTGCGCTGCATAATGTGTTCTTTGTGTGAACATGAGCTGGCTTCACAGGGTATATATGGGACCATGGAAATGCTGGTGTAGGCCCCGATGATTTTGCTGTGAAGTTAAATGACGTCTGGTGTTTTTTCCGCTCCGAGTTAGTTTTTTCAACTCAAGGCGTTCAGGACGCTTCTGCCGCAACCAAAAAGCTTCTCTCTCATTGAAAACCATTCAAAAAAAGCTGCCCCTGGCTGTTAAAACGCCCTCTCTTATCTGGGCCTtataagtgtgtgtatatacaatGAAGAGGACTGTTGCTGTCTGTTCATATTAACATAACTTGTCATAAATACAGTTGTAAAATAGAAACTATAATTCgataaatatttaatattttcagtAAGACTTTGTTACAGTGTAAACTTTGTCAACAATAAACATTCTTTTATCACAGTT

Function

symbol description
imp3 Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Part of Mpp10 complex. Orthologous to human IMP3 (IMP U3 small nucleolar ribonucleoprotein 3).

NR:

description
U3 small nucleolar ribonucleoprotein protein IMP3

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0019843 rRNA binding molecular_function

KEGG:

id description
K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816860.1 True 1403 mRNA 0.42 7 15549860 15553969

Neighbor

gene id symbol gene type direction distance location
zgc:55943 clg18h1orf21,LOC104920916,LOC103358173,LOC102298056 coding downstream 2503 15537896 ~ 15547357 (-)
si:ch211-13f8.2 NA coding downstream 14057 15529158 ~ 15535803 (-)
LOC120568593 LOC104948391 coding downstream 30932 15484190 ~ 15518928 (-)
LOC120568743 NA coding downstream 87261 15452439 ~ 15462599 (-)
LOC120568994 LOC103358814,LOC104920922,LOC108238208 coding downstream 97995 15444472 ~ 15451865 (-)
fam78ba LOC108248539,LOC106530399,LOC103357776,LOC101481240,LOC104920913,LOC105925252,LOC103479089 coding upstream 14861 15568830 ~ 15573140 (-)
bcl6ab NA coding upstream 26807 15580776 ~ 15587884 (-)
cldn1 cldn1 coding upstream 62428 15616397 ~ 15620659 (-)
pigk pigk coding upstream 369733 15923702 ~ 15954239 (-)
zzz3 zzz3 coding upstream 479313 16033282 ~ 16054068 (-)
G114883 NA non-coding downstream 142233 15407377 ~ 15407627 (-)
LOC120568803 NA non-coding downstream 156601 15387478 ~ 15393259 (-)
G114836 NA non-coding downstream 283636 15264520 ~ 15266224 (-)
G114752 NA non-coding downstream 467880 15076141 ~ 15081980 (-)
G114733 NA non-coding downstream 546815 15001144 ~ 15003045 (-)
G115017 rps8 non-coding upstream 167050 15721019 ~ 15727229 (-)
G115041 NA non-coding upstream 181085 15735054 ~ 15735281 (-)
G115042 NA non-coding upstream 181511 15735480 ~ 15735895 (-)
G115043 NA non-coding upstream 182560 15736529 ~ 15736827 (-)
G115048 NA non-coding upstream 187855 15741824 ~ 15745228 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 245250 15290082 ~ 15304610 (-)
G114680 NA other downstream 752816 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 931636 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1581049 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 2067635 13469531 ~ 13482225 (-)
G115164 btf3l4 other upstream 590191 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 628685 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 763449 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 776983 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 1083139 16637108 ~ 16639812 (-)

Expression


Co-expression Network