LOC120569047 (LOC100692494,LOC102787312,LOC101472913,LOC107080869)


Basic Information

Item Value
gene id LOC120569047
gene name LOC100692494,LOC102787312,LOC101472913,LOC107080869
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 388691 ~ 397504 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816863.1
ctatgtgtgtgtggttttaagTGTGTAGCTTTGAGTAATTGGGATGGATTGTGTGTTTGCTGACAGGTGATGCTGTCAGGATGTCTGACGGGAGGCAGCGAACATTGTCCACATCTGGAGAGTCTCTGTACCAGATCCTGGGTCTACAGAAAGGCTGTTGCCATGACGACATCAAGAAGTCCTACAGgAAGCTGGCGTTGCGGTTCCACCCCGATAAGAACCCTGATAACCCCGAGGCAGCGGAGAAGTTTAAGGAGCTGAACAGCGCCCACGCCGTTCTGTCGGACCTCACCAAGAGGAACATCTACGACTCGTACGGCTCTCTGGGGCTCTACGTGGCTCAGCAGTTCGGAGAGGACAACGTCAACGCATACTTCATGCTGTCCACCTGGTGGGCCAAGGGTCTGTTCTTTGTCTGCGGCGTGCTGACcggctgctactgctgctgctgtctctgctgctgctgtaactGCTGTTTTGGGAAGCTGAAGCCGACGCCgccgggggaggggggggggccggACTACGTCTCCCCCGACGACCTGGAGGAGGAGATACGCAACGACCCCGACGACGatGTTGAAACTCCGATCGTTCAGCAGCCGACGAACGCCAGCGAGAAAACTCAGCTGATCACCGACGGCCACCGCAGATACGGAGACACCTACAcatgaaacaggaaacaggaaacaggaaacaggaaacaggaaacagaaaaatGCGTATGAAATCAAAAGTGAATTGGAATTCATGTTGAAGCAACAGTCCTCATCTTCCTCTGATAAACACATAATAACTTTATCTTCTATATAAtgtagaaagacagacagacagacacaaagaaagacagacagacagagacagacagacacaggcacagacacagacagacagacggagacagacagacagaca
>XM_039816864.1
cccctctctgtctcaccTGCTGTGACTCACCTGCTGTGACTCAAAGCGTCCATCGGAGCGTCCCGGTGAAACCCGAGCTGGCGTGGCGGCTCGTGGTCACCGGAGCCGAGCAGCTGTTGAATGATTGATGGCCGACAGACACCGATCCTAAAAAGACCTGAGCAGGTAGAGGACAGTTAGACAGTGCTCTGAGGCTCCAACAGGCAGGTAACACCAGCAGGCAGGTGATGCTGTCAGGATGTCTGACGGGAGGCAGCGAACATTGTCCACATCTGGAGAGTCTCTGTACCAGATCCTGGGTCTACAGAAAGGCTGTTGCCATGACGACATCAAGAAGTCCTACAGgAAGCTGGCGTTGCGGTTCCACCCCGATAAGAACCCTGATAACCCCGAGGCAGCGGAGAAGTTTAAGGAGCTGAACAGCGCCCACGCCGTTCTGTCGGACCTCACCAAGAGGAACATCTACGACTCGTACGGCTCTCTGGGGCTCTACGTGGCTCAGCAGTTCGGAGAGGACAACGTCAACGCATACTTCATGCTGTCCACCTGGTGGGCCAAGGGTCTGTTCTTTGTCTGCGGCGTGCTGACcggctgctactgctgctgctgtctctgctgctgctgtaactGCTGTTTTGGGAAGCTGAAGCCGACGCCgccgggggaggggggggggccggACTACGTCTCCCCCGACGACCTGGAGGAGGAGATACGCAACGACCCCGACGACGatGTTGAAACTCCGATCGTTCAGCAGCCGACGAACGCCAGCGAGAAAACTCAGCTGATCACCGACGGCCACCGCAGATACGGAGACACCTACAcatgaaacaggaaacaggaaacaggaaacaggaaacaggaaacagaaaaatGCGTATGAAATCAAAAGTGAATTGGAATTCATGTTGAAGCAACAGTCCTCATCTTCCTCTGATAAACACATAATAACTTTATCTTCTATATAAtgtagaaagacagacagacagacacaaagaaagacagacagacagagacagacagacacaggcacagacacagacagacagacggagacagacagacagaca

Function

NR:

description
PREDICTED: dnaJ homolog subfamily C member 5 isoform X2

GO: NA

KEGG:

id description
K09525 DNAJC5; DnaJ homolog subfamily C member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816863.1 False 915 mRNA 0.52 4 388691 395071
XM_039816864.1 True 1073 mRNA 0.54 5 388691 397504

Neighbor

gene id symbol gene type direction distance location
LOC120569059 NA coding downstream 61312 326426 ~ 327379 (-)
LOC120567752 NA coding downstream 78629 309109 ~ 310062 (-)
LOC120568960 LOC103372168,LOC101474198,LOC102083149 coding downstream 298749 64577 ~ 89942 (-)
ttc19 ttc19,LOC107081472 coding downstream 325231 52608 ~ 63460 (-)
LOC120568662 NA coding downstream 342710 274 ~ 45981 (-)
LOC120568379 NA coding upstream 1530 399034 ~ 417701 (-)
LOC120568383 NA coding upstream 22397 419901 ~ 433183 (-)
LOC120568382 NA coding upstream 37783 435287 ~ 453081 (-)
LOC120568381 NA coding upstream 60947 458451 ~ 512917 (-)
LOC120568477 NA coding upstream 125765 523269 ~ 531734 (-)
G110895 NA non-coding downstream 16000 267135 ~ 372691 (-)
G110896 NA non-coding downstream 119292 256381 ~ 269399 (-)
G110899 NA non-coding downstream 127743 260603 ~ 260948 (-)
G110874 NA non-coding downstream 158468 173655 ~ 230223 (-)
G110865 NA non-coding downstream 186372 151167 ~ 202319 (-)
G110925 NA non-coding upstream 100040 497544 ~ 543185 (-)
LOC120567842 NA non-coding upstream 150831 548335 ~ 548652 (-)
G110946 NA non-coding upstream 280314 677818 ~ 767571 (-)
G110964 NA non-coding upstream 358417 755921 ~ 796589 (-)
G110958 NA non-coding upstream 408758 806262 ~ 808340 (-)
G110889 LOC100692763,LOC108229211,LOC107383400 other downstream 6026 375712 ~ 382665 (-)
adhfe1 adhfe1 other downstream 86549 258075 ~ 302142 (-)
LOC120567755 NA other downstream 145592 235257 ~ 243099 (-)
G110840 NA other downstream 213826 57407 ~ 174865 (-)
G110957 NA other upstream 356759 754263 ~ 766300 (-)
G110988 NA other upstream 451678 849182 ~ 849492 (-)
G111136 NA other upstream 607567 1005071 ~ 1005925 (-)
G111133 NA other upstream 610729 1008233 ~ 1100670 (-)
G111134 NA other upstream 611390 1008894 ~ 1010100 (-)

Expression


Co-expression Network