cdc7 (cdc7)


Basic Information

Item Value
gene id cdc7
gene name cdc7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33602063 ~ 33610603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816907.1
CGTCACTCTTGGCGCGTAGTTTGTTGTTGGCAGGAAAAGCTTCACAGTCTGAACAAACTATTTTATTCGGCCGAGTGATATTTGTATACTTAGCTACGTTTTCGTCGATGGAACATTAGCTTGTGACTGCATGGTGTTCTCATGAAACGGTCATTTGAAGACTCTATTGCACTTTACGACCAACTAAAGCGATGGAGTTGTCTCCTGTCTGCACCGAAGGCGTCAGCTTAGACGGATGTATTAAATCTGACAGAGGTCACAGGAGAAGGAAAGTCTCAAGGGATGTGGAAATAGACATCGACATCCTTTACCAAGCTGTCCCTCAGCTGGCCAAAGTTTTTCGCATCATAGACAAAATTGGAGAAGGTACGTTCAGCTCTGTGTATCTGGGTGAGGCACAGATGCGGGATGGGAGGAAAGAGATGTTTGCCCTGAAGCACCTCATCCCAACCAGCCATCCTACACGCATCGCTGCTGAACTTCAGTGTCTCACTGTTGCTGGaggcagagagaatgTGATGGGGGTGACGTACTGCTTCAGGAAGGAGGACCACGTGGTGATTGTCATGCCTTATATGGAGCATCAAGCTATTGTGGACATCATTGGCACATTGAGCTTTGAAGAGGTCCGTCTGTACATCTATCACCTGTTGAAGGCCCTCAGGCACATCCATCAGTTTGGTATCATTCACCGAGACATCAAACCAAACAATTTCCTCTACAACAGGCACAGCAAAATgtatgcACTGGTGGACTTTGGCCTGGCTCAGGGTACAGCGGACACCCAGATTGAGCTGCTGAAGGTTGTGAGGCAGAGGCCATCACAAAAAGGTGGAGGGTCCACAGGGAAACAAGACACCACACAGCGGAGCAAAGCACCACCTAGGCTCCTTCCCAAAACCACCACCACAGCCTCCACCTCACTACCTCATCCTCCACGGCAGTCCACAACCTTGtcaccttcctcctcttcttcctccaccACCAAATCCTCCTCAGCCTCTCGGAAAGCACTAGTTAAAAAATCCCGTTCTGTCACCACCTCCACCTCTCGCACAAAGCACTCTAAGGATTTGACAGGACTACGCAAAGTGCCACGGCCTGTGTTTGGAGAGAGGAACCTGAACAGCTGCACTCCAGCTCCATCCGCCACCAAACAACCTGTCGTTAAGACCGAGCTGTTAAAGCTCGGCAAAATGGAGGACCCAGCCACCCGAAGGTGCTCTTCAGCCAGCCGGGGCCCGCTGCCTGTCAGGACCCAGAGCAGCAGTCAGAAACCTCAGAGGACCGTACTGCAGGGCCTCACCTGTAGCTGCTACCTGACTGACCGTGTCTGCAACATCTGCATGTCCAGGAAGCAGCAGGTGGCCCCCAGGGCTGGAACACCGGGCTTCAGAGCACCAGAAGTCCTCACAAAGTGTCCCAACCAAGGAACAGCCATAGACATGTGGTCAGCTGGTGTGATCCTGCTCTCGCTGCTCAGTGGCCGCTACCCGCTCTTCAAAGCCAGCGATGACCTGATCGCCCTCACTCAGATCATGACCATACGAGGCTCCAGGGAGACCATCCAGGCTGCCAAGGCATTTGGTAAGGCAGTGGTGTGCAGTCGGGATCTACCTCGGCAGGACCTCAGGACGCTGTGCGAGACGCTGAGAGGACGGAGGCCTGCACCAGATGAAGTCACGCCGCTACCTGAAGCCAACAAAGACTCCGCCGCCACCTGTCACCACAAGATCCAAGATGATACGCCCACGCATCATCCCGCCGAGGGACCACTGAAGCAACCCAAAGATGAAGCCAGTGAAAGACCTGGgtctctctcttctgctctcccaAACCCCCAGGAACGTTCAGGGAACACAGAAACCGCTCGCCTCGCTAAACAGAGCTCAGGGACGGACTGTAAGGTGAAGGAAGATGAGCGGGGCTGGGACAGAGTTCCTGATGAGGCCTACAACCTGCTGGACCGGCTGCTGGACCTGAACCCTGCCACCAGGATCACAGCCGCTCAGGCCCTGCGGCACCCACTGTTCAAAGACCTGTGAAACCAGCAGTCTCAAATCCATGTAACACAACTGCCAGCTTCCTAGACTTTGGTTCAGATTTCATAAACTGGATGATTCAGAGATAAAGGGGTGTTATacttaatatttaatttacgAATTGTAACCCAGCAGAGAAGGTTAGTCTGTCTCCATATGAGAAATAATTCTGCTGCAAAGCAGAGAGATGTTCACATCCCCGCATGGAGAAATGACCTGAACAAGAGAACAGAGTTCTGATACGTGTCTGTGTGGGGAGGAAAAACGTCTTTCAATTTTCTCTCCAATCAACCCGTTAAATGCTTCATAGATTTTAATATTAGTATGTCAGTTCAAGACAGGTTTGAATTGCGTTCACAGGCCTGCCGTTTATGACAGCTAAGTTACAGTTCTTTTAACAGTGGACTTTTTAAAA
>XM_039816908.1
GTCACTCTTGGCGCGTAGTTTGTTGTTGGCAGGAAAAGCTTCACAGTCTGAACAAACTATTTTATTCGGCCGAGTGATATTTGTATACTTAGCTACGTTTTCGTCGATGGAACATTAGCTTGTGACTGCATGGTGTTCTCATGAAACGGTCATTTGAAGACTCTATTGCACTTTACGACCAACTAAAGCGATGGAGTTGTCTCCTGTCTGCACCGAAGGCGTCAGCTTAGACGGATGTATTAAATCTGACAGAGGTCACAGGAGAAGGAAAGTCTCAAGGGATGTGGAAATAGACATCGACATCCTTTACCAAGCTGTCCCTCAGCTGGCCAAAGTTTTTCGCATCATAGACAAAATTGGAGAAGGTACGTTCAGCTCTGTGTATCTGGGTGAGGCACAGATGCGGGATGGGAGGAAAGAGATGTTTGCCCTGAAGCACCTCATCCCAACCAGCCATCCTACACGCATCGCTGCTGAACTTCAGTGTCTCACTGTTGCTGGaggcagagagaatgTGATGGGGGTGACGTACTGCTTCAGGAAGGAGGACCACGTGGTGATTGTCATGCCTTATATGGAGCATCAAGCTATTGTGGACATCATTGGCACATTGAGCTTTGAAGAGGTCCGTCTGTACATCTATCACCTGTTGAAGGCCCTCAGGCACATCCATCAGTTTGGTATCATTCACCGAGACATCAAACCAAACAATTTCCTCTACAACAGGCACAGCAAAATgtatgcACTGGTGGACTTTGGCCTGGCTCAGGGTACAGCGGACACCCAGATTGAGCTGCTGAAGGATTTGACAGGACTACGCAAAGTGCCACGGCCTGTGTTTGGAGAGAGGAACCTGAACAGCTGCACTCCAGCTCCATCCGCCACCAAACAACCTGTCGTTAAGACCGAGCTGTTAAAGCTCGGCAAAATGGAGGACCCAGCCACCCGAAGGTGCTCTTCAGCCAGCCGGGGCCCGCTGCCTGTCAGGACCCAGAGCAGCAGTCAGAAACCTCAGAGGACCGTACTGCAGGGCCTCACCTGTAGCTGCTACCTGACTGACCGTGTCTGCAACATCTGCATGTCCAGGAAGCAGCAGGTGGCCCCCAGGGCTGGAACACCGGGCTTCAGAGCACCAGAAGTCCTCACAAAGTGTCCCAACCAAGGAACAGCCATAGACATGTGGTCAGCTGGTGTGATCCTGCTCTCGCTGCTCAGTGGCCGCTACCCGCTCTTCAAAGCCAGCGATGACCTGATCGCCCTCACTCAGATCATGACCATACGAGGCTCCAGGGAGACCATCCAGGCTGCCAAGGCATTTGGTAAGGCAGTGGTGTGCAGTCGGGATCTACCTCGGCAGGACCTCAGGACGCTGTGCGAGACGCTGAGAGGACGGAGGCCTGCACCAGATGAAGTCACGCCGCTACCTGAAGCCAACAAAGACTCCGCCGCCACCTGTCACCACAAGATCCAAGATGATACGCCCACGCATCATCCCGCCGAGGGACCACTGAAGCAACCCAAAGATGAAGCCAGTGAAAGACCTGGgtctctctcttctgctctcccaAACCCCCAGGAACGTTCAGGGAACACAGAAACCGCTCGCCTCGCTAAACAGAGCTCAGGGACGGACTGTAAGGTGAAGGAAGATGAGCGGGGCTGGGACAGAGTTCCTGATGAGGCCTACAACCTGCTGGACCGGCTGCTGGACCTGAACCCTGCCACCAGGATCACAGCCGCTCAGGCCCTGCGGCACCCACTGTTCAAAGACCTGTGAAACCAGCAGTCTCAAATCCATGTAACACAACTGCCAGCTTCCTAGACTTTGGTTCAGATTTCATAAACTGGATGATTCAGAGATAAAGGGGTGTTATacttaatatttaatttacgAATTGTAACCCAGCAGAGAAGGTTAGTCTGTCTCCATATGAGAAATAATTCTGCTGCAAAGCAGAGAGATGTTCACATCCCCGCATGGAGAAATGACCTGAACAAGAGAACAGAGTTCTGATACGTGTCTGTGTGGGGAGGAAAAACGTCTTTCAATTTTCTCTCCAATCAACCCGTTAAATGCTTCATAGATTTTAATATTAGTATGTCAGTTCAAGACAGGTTTGAATTGCGTTCACAGGCCTGCCGTTTATGACAGCTAAGTTACAGTTCTTTTAACAGTGGACTTTTTAAAA

Function

symbol description
cdc7 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in double-strand break repair via break-induced replication and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human CDC7 (cell division cycle 7).

NR:

description
cell division cycle 7-related protein kinase isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K02214 CDC7; cell division control protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816907.1 True 2457 mRNA 0.51 12 33602063 33610603
XM_039816908.1 False 2189 mRNA 0.51 12 33602064 33610603

Neighbor

gene id symbol gene type direction distance location
hfm1 hfm1 coding upstream 612 33574164 ~ 33601451 (+)
LOC120569066 NA coding upstream 42155 33551632 ~ 33559908 (+)
lrrc8da LOC103355795 coding upstream 52184 33533074 ~ 33549879 (+)
hs2st1a hs2st1 coding upstream 128446 33434202 ~ 33473617 (+)
cldn18 NA coding upstream 182369 33414075 ~ 33419694 (+)
rpap2 NA coding downstream 11785 33622388 ~ 33643583 (+)
rpl5a LOC104920939,LOC100700425,LOC103149531,LOC106904255,LOC106958298,LOC107396374 coding downstream 47196 33657799 ~ 33661745 (+)
mtf2 mtf2 coding downstream 72098 33682701 ~ 33698786 (+)
ccdc18 NA coding downstream 91029 33701632 ~ 33729640 (+)
scinlb LOC106958286,LOC106904251,LOC103149535 coding downstream 132656 33743259 ~ 33767779 (+)
G119922 NA non-coding upstream 3406 33597873 ~ 33598657 (+)
G119901 NA non-coding upstream 39992 33538172 ~ 33562071 (+)
G119767 NA non-coding upstream 311483 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 332861 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 408864 33192587 ~ 33193199 (+)
LOC120569016 NA non-coding downstream 250835 33861438 ~ 33866996 (+)
LOC120569017 NA non-coding downstream 256792 33867395 ~ 33870784 (+)
G119961 NA non-coding downstream 257166 33867769 ~ 33868000 (+)
G119963 NA non-coding downstream 257783 33868386 ~ 33868686 (+)
G120058 pif1 non-coding downstream 365225 33975828 ~ 33976887 (+)
pkn2a pkn2 other upstream 86639 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 294199 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 435963 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 552982 32988817 ~ 33049081 (+)
G119585 NA other upstream 820592 32780988 ~ 32781471 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 200365 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 247939 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 344563 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 553477 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 556373 34166976 ~ 34172309 (+)

Expression


Co-expression Network