sirt6 (sirt6)


Basic Information

Item Value
gene id sirt6
gene name sirt6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27295370 ~ 27307660 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816938.1
GCAGTTTTAAATAACCGCCTGGGAGCTTCTACCACTCTCTATGCGTATGACACAGGAACAGCTTTCTAAACAAGTATAATAGTAGTATAATAAACCTACTAGCTATACCAACTACAGCCATGTCTGTGAATTATGCTGCCGGGCTCTCACCGTACGCAGATAAAGGTGTTTGCGGACTTCCCGAGATGTTTGACAGTCCTGAGGAGCTAAAGGCGAAGGTGGAAACCCTCGCTCAGTTGATAAAAGAATCACAGTACCTGGTTGTCCACTCTGGAGCAGGAATCAGCACCGCAGCAGGCATCCCCGACTTCAGGGGCCCAAAGGGTGTGTGGACGTTAGAAGAAAAGGGGGAGTCACCTCACTTTGACACCACATTTGAAGAAGCCCGACCCAGCTTGACTCACATGGCCCTCTTGGGACTGCAGAGGGCCGGCTACCTCAAGTATCTCATCAGCCAGAATGTGGACGGCCTACATGTCCGATCAGGCTTCCCCAGGGATATGTTATCAGAGCTTCATGGAAATATGTTTGTAGAGGAGTGTGAGAAGTGTGGCAGGCAGTATGTCAGAGAAAAAGTGATTGGTGTAATGGGACTGAAACCGACAGGACGTTACTGTGATGTTGTACGATCCAGAGGACTCAGAGCCTGCAGAGGAAAGCTGATAAGCACTATCCTGGATTGGGAGGATGCTCTTCCTGACAGAGACCTGAACAAAGCAGAAGATAGCAGCAGACGAGCAGACCTGGCACTGACGCTGGGCACCTCCCTGCAGATCAAACCCAGCGGAGACCTTCCACTTCTCACCAAGCGCAAAGGAGGGAAACTGGCCATTGTCAACCTGCAGCCCACGAAACACGACAAGCATGCACACCTGCGTATCCATAGTTACGTGGACGATGTCATGAAACAGCTGATGGAGCTGCTGGGATTGGACATCCCAAAGTGGGAGGGTCCGACTGTCTGCGAGAGCTCCAAAGCCAACTCTGAGTCCGCCACCGATGTCAAACCACCGCGTGCAATTACAGCaaagaaaaaggggaaaaaggACCTGATTAAggtggagaggaaaagagacacAACGGCACTAACAGACGATGGGAGTGTTAAGGAGGAGACGGTGTCAGtaaagagggagagagcagaTTCCTCAGTGGAGATAAAAGAAGAGAAATAGCCTCAGGTATTTCTTTCACAAACCCGTCCACAAATAACTGAGGGTGCTTGGTTTGATCAGATTCAGAGAACAGAGATTCTTCTCATCTAATGCCCTCTGGAGCAAAGACTCTTCTAGTActgtagcattttttttttatacctaaTACCTGATTTGTACATGGAGTACCTGCACTGCTTTCTGGCTGTAAATGGACCATAATCACACTGTACGTTTCtaggaaaatgtttttatatcagGAAAAAAGCATTGTACTCTGATGGAAAAAGTCACTTTActgtttaaaa

Function

symbol description
sirt6 Predicted to enable NAD+ binding activity and transferase activity. Is expressed in liver and retina. Orthologous to human SIRT6 (sirtuin 6).

NR:

description
NAD-dependent protein deacetylase sirtuin-6

GO:

id name namespace
GO:0070403 NAD+ binding molecular_function

KEGG:

id description
K11416 SIRT6, SIR2L6; NAD+-dependent protein deacetylase sirtuin 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816938.1 True 1462 mRNA 0.48 8 27295370 27307660

Neighbor

gene id symbol gene type direction distance location
LOC120567764 LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414 coding downstream 34024 27252534 ~ 27261346 (-)
LOC120567762 LOC101482480,LOC102795251 coding downstream 50929 27211015 ~ 27244441 (-)
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding downstream 187644 27095802 ~ 27107726 (-)
LOC120567768 NA coding downstream 293318 26998041 ~ 27002052 (-)
plekhj1 plekhj1 coding downstream 304597 26986732 ~ 26990773 (-)
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding upstream 2645 27310305 ~ 27317595 (-)
sema4e LOC103364382 coding upstream 21422 27329082 ~ 27338096 (-)
stap2a LOC103364380,LOC104964213 coding upstream 31451 27339111 ~ 27344282 (-)
LOC120567871 sh3gl1 coding upstream 36902 27344562 ~ 27360321 (-)
LOC120567870 LOC104929640,LOC103364379 coding upstream 55893 27363553 ~ 27381615 (-)
G118401 NA non-coding downstream 70 27294283 ~ 27295300 (-)
G118339 NA non-coding downstream 95681 27198582 ~ 27199689 (-)
G118337 NA non-coding downstream 97722 27174552 ~ 27197648 (-)
G118328 NA non-coding downstream 105137 27119032 ~ 27190233 (-)
G118482 NA non-coding upstream 271308 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 294741 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 320226 27627886 ~ 27664712 (-)
G118608 LOC103372824 non-coding upstream 787363 28095023 ~ 28099810 (-)
G118613 NA non-coding upstream 836768 28144428 ~ 28145034 (-)
cirbpa cirbp other downstream 470800 26819838 ~ 26824570 (-)
G118175 NA other downstream 629418 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 975775 26315770 ~ 26319595 (-)
G117732 NA other downstream 2372052 24922203 ~ 24923318 (-)
G117560 NA other downstream 2758874 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 335667 27643327 ~ 27675360 (-)
G118524 NA other upstream 405807 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 838611 28146271 ~ 28152770 (-)
G118764 NA other upstream 1678431 28986091 ~ 28986319 (-)
G118856 NA other upstream 2112719 29420379 ~ 29420652 (-)

Expression


Co-expression Network