LOC120569097 (LOC100708378,LOC102195897,LOC102780857)


Basic Information

Item Value
gene id LOC120569097
gene name LOC100708378,LOC102195897,LOC102780857
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14817259 ~ 14829753 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816961.1
ATCAAGTCACAGTAGATGTGGAATATTCCCACAGACAGATGGTTTCATAATAACGAGAGAAGAACTTGCAAAAGTGTGCGGCTCCTTGAAAAGAGAAGGTCATGAAGGTTCAACAGATCTCACACCATGTTGTCTTTATCCTGCTGGCTGCTGCTGTACGATCTCAAGTCAACCCAGAAATCTGTCGATATCCTCTCGGTATGACCAGTGGGCAGATTCAGGACGAGGACATCTCTGCCTCCAGTCAGTGGTCTGAGTCAACTGCTGCAAGATTTGGCAGACTTGACTTAGACAACGGAGACGGTGACGGGGCCTGGTGTCCTGACATCATGTCAGAGCCGGACGGCCTCAAAGAGTATCTCCAGGTGGACCTGCGTTCACTACACTTCATCACGCTGGTGGGCACCCAAGGTCGCCACGCCGACGGCATGGGTAATGAGTTTGCCCAGCGATACAGGATCATGTACAGCCGCGACGGCAGCGAGTGGGTGGGCTGGCATGATAGGAAGGGAAGGCAGGTCATTGAGGGGAACAGGAATGCGTATGATGTGGTGCTAAAGGATCTGGAGCCTCCCATCATAGCTCGTTTTGTCCGCTTTATGCCTGTGACAGACCACTCCATGATCGTGTGTATGAGAGTGGAGCTCTACGGCTGTGAATGGCTGGATGGCCTGATGTCTTATAGCATTCCAGATGGGCACCAAATGATCTACAGAGGCCTGGATGTCTACTTTAATGACTCTGTGTATGATGGAGCATCAGCTGATAGACTGACAAAGGGCCTCGGTCAGCTGACGGATGGCACCTGGGGTCTGGATGATTTTCTCCACAGCCACATATACGCCATGTGGCCAGGGTACGACTACGTGGGCTGGAACAACAAGAGCCTCCCCAAAGGTTACGTGGAGATGATTTTTGAGTTTGATCACGTCCGAAACTTCACATCCATGAAGGTTCACTGTAATAACATGTTTAGCCGAGGGGTGAGGATGTTCAGACAGGCCACCTGTTACTTCCGGTCAGGATCAGACTGGGAGGCTGACCCGGTGACATTCAGGCCCACTGTCGACCGCACGAGCCAAAGCGCCCGTTTTGTCACTGTGTCCCTCGGGGACCGCACAGCCAGCGCCATCAAATGCCGTTTCCACTTCAGTGATGTTTGGATGCTCTTCAGTGAGGTGGCCTTCCAGTCAGGCTCAGCAGTGTACAACACATCTCCGACTGCTACCAAACACCCCACAAACACACCGCCAGCTCTCATCTGGCTAGGAGATGATCCTACTCATAAATTGGATGACAGCAATACCAGGATCCTGATTGGCTGCTTGGTGGCTATCATCGCCATCTTATTGGCTATCATAGTCATCACCCTGTGGAGGCAGGTCTGGCAAAAGATGCTTGAGAAGGCATCCCGCCGCCTGCTGGATGATGAACTCACAGCTCGTCTTGCGGTCCAGACCCAGGCCTTCTCCTCCCACCACTCCTCTCTGTCCAGCGAGAGTGGCTTCACCTCCAACTTCACCTATGAGAGAATCTTCCCCCTCTGCTCCGACTACCAGGAGCCTTCCCGCCTTATCCGGAAACTACCCGAGTTTGCTCAGTCCACTGAACACCTCGGACCGAGCACCTCCTGTAGAGCCCTCGCAGCCAGTGGTGCAGACGGTGCCCCCCACTATGCGGAGGCAGACATCATCAGCCTCCAGGAGTCTTCAGACAGCAGCACCTACTCCATCACAGCTGTCGACATGACTCTTTTTGCTGGCACAGATTCATCCATGAGAGAGTTCCCCAGACACAAGCTCACGTTCAAGGAGAAACTGGGAGAGGGCCAGTTTGGAGAAGTGCACTTGTGTGAGGCAGAGGGCATGCAGGACTTTTTGGATGAGGATTTGTCTATAGAGGGAAACGATGAGTCACCCCTGCTGGTTGCTGTGAAAACACTGCGGGAAGATGCCAACAAGAATGCAAGGAATGACTTCCTGAAGGAGATCCGAATCATGTCTCGCCTGAGGGACCCCAACATTGTTCGTCTGCTGGCGGTGTGTGTGGACACAGACCCACTGTGTATGATCACTGAGTACATGGAAAATGGAGACCTGAACCAGTTCCTCTGCAATCTCAGACTGAAAGAGGCTGCTGATGAAGACAAGACAGAACAAGAGGAAAAAGAGGGGGAGAGTATGGTCAGTTATAGTAAACTCATTGGCATGGCTGTGCAGATTGCATCTGGAATGAAGTACTTGTCCTCTCTCAACTTTGTCCACCGTGATCTGGCGACACGCAACTGCCTGGTGGGTAAGAACTACACCATAAAGATAGCTGATTTTGGCATGAGTCGGAACCTGTATAGAGGGGACTACTACAGGATCCAGGGCCGGGCCGTCCTGCCCATTCGCTGGATGTCCTGGGAGAGCATCCTACTGGGTAAATTCACCATGGCCAGTGACGTGTGGGCATTTGGTGTGACTCTGTGGGAGATTCTGACTCTGTGTAAGAAGCAGCCCTACTCCCAGCTCTCTGACGAGCAGGTCATTGAAAACACCGGCGAGTACTTCAGGGACCAGGGCAAGCAGGTGTACCTGCCAAAGCCTCCCTGTTGTCCTGACAGAGTCTACAATGATCTCATGCTGAGCTGCTGGAGGAGGAACGCCAAGCAGAGGCCGAGCTTTCAAGAGATACACACTCAGCTGATGGAGAGCCTGGCGTAACAAATGGAACAGATCATTTCTCTTTGCCATGCACTGTCACTGTACATGTCACATTTGCTCCCTTCAGTCTGGATATATTTGGGATCAATTTGAAATCAGAAACAACCCATCAAAtgtaaccatttgtttttagcTGACGTGCCACAATGGTGCTGTAAATAATAAGATATGAGGAGAAGGTATACACTTGAAAAGTGCcttgtgttttatatatacaAATTAGCACTGTTCACCCAGTGAATTCACTCctttgtgtatttattaatttctttttatttcctaTGCTATGTCTATTTATAGAGTACTCTATGGTAATCCtagatttaaaaacacaattgtgATTTTTCTTTCAATTTATTTTCCATACATACATCTAATTCTACTGCACATTTATTAGAAGATGTCTATACAAATGTGTGACCTTTTatgaatgtttatatttttgctttttaagGGGGAACAAATGGCATGATAATGACTGTTGTCTAGATGAGACAGGTGTTTTTACGCTGCAGCAGTTCACTGACATGTTTTATAAACATGTTTACGTCCTTTTGCAGAAATATGCATGTGTATATTGTTGAACAGTAGCCTAGTAAAGAACAAACCAAGTCAAACGAAAGATCCATGGAAATAAAGATAATTAATATTTA
>XM_039816962.1
ATCAAGTCACAGTAGATGTGGAATATTCCCACAGACAGATGGTTTCATAATAACGAGAGAAGAACTTGCAAAAGTGTGCGGCTCCTTGAAAAGAGAAGGTCATGAAGGTTCAACAGATCTCACACCATGTTGTCTTTATCCTGCTGGCTGCTGCTGTACGATCTCAAGTCAACCCAGAAATCTGTCGATATCCTCTCGGTATGACCAGTGGGCAGATTCAGGACGAGGACATCTCTGCCTCCAGTCAGTGGTCTGAGTCAACTGCTGCAAGATTTGGCAGACTTGACTTAGACAACGGAGACGGTGACGGGGCCTGGTGTCCTGACATCATGTCAGAGCCGGACGGCCTCAAAGAGTATCTCCAGGTGGACCTGCGTTCACTACACTTCATCACGCTGGTGGGCACCCAAGGTCGCCACGCCGACGGCATGGGTAATGAGTTTGCCCAGCGATACAGGATCATGTACAGCCGCGACGGCAGCGAGTGGGTGGGCTGGCATGATAGGAAGGGAAGGCAGGTCATTGAGGGGAACAGGAATGCGTATGATGTGGTGCTAAAGGATCTGGAGCCTCCCATCATAGCTCGTTTTGTCCGCTTTATGCCTGTGACAGACCACTCCATGATCGTGTGTATGAGAGTGGAGCTCTACGGCTGTGAATGGCTGGATGGCCTGATGTCTTATAGCATTCCAGATGGGCACCAAATGATCTACAGAGGCCTGGATGTCTACTTTAATGACTCTGTGTATGATGGAGCATCAGCTGATAGACTGACAAAGGGCCTCGGTCAGCTGACGGATGGCACCTGGGGTCTGGATGATTTTCTCCACAGCCACATATACGCCATGTGGCCAGGGTACGACTACGTGGGCTGGAACAACAAGAGCCTCCCCAAAGGTTACGTGGAGATGATTTTTGAGTTTGATCACGTCCGAAACTTCACATCCATGAAGGTTCACTGTAATAACATGTTTAGCCGAGGGGTGAGGATGTTCAGACAGGCCACCTGTTACTTCCGGTCAGGATCAGACTGGGAGGCTGACCCGGTGACATTCAGGCCCACTGTCGACCGCACGAGCCAAAGCGCCCGTTTTGTCACTGTGTCCCTCGGGGACCGCACAGCCAGCGCCATCAAATGCCGTTTCCACTTCAGTGATGTTTGGATGCTCTTCAGTGAGGTGGCCTTCCAGTCAGGCTCAGCAGTGTACAACACATCTCCGACTGCTACCAAACACCCCACAAACACACCGCCAGGAGATGATCCTACTCATAAATTGGATGACAGCAATACCAGGATCCTGATTGGCTGCTTGGTGGCTATCATCGCCATCTTATTGGCTATCATAGTCATCACCCTGTGGAGGCAGGTCTGGCAAAAGATGCTTGAGAAGGCATCCCGCCGCCTGCTGGATGATGAACTCACAGCTCGTCTTGCGGTCCAGACCCAGGCCTTCTCCTCCCACCACTCCTCTCTGTCCAGCGAGAGTGGCTTCACCTCCAACTTCACCTATGAGAGAATCTTCCCCCTCTGCTCCGACTACCAGGAGCCTTCCCGCCTTATCCGGAAACTACCCGAGTTTGCTCAGTCCACTGAACACCTCGGACCGAGCACCTCCTGTAGAGCCCTCGCAGCCAGTGGTGCAGACGGTGCCCCCCACTATGCGGAGGCAGACATCATCAGCCTCCAGGAGTCTTCAGACAGCAGCACCTACTCCATCACAGCTGTCGACATGACTCTTTTTGCTGGCACAGATTCATCCATGAGAGAGTTCCCCAGACACAAGCTCACGTTCAAGGAGAAACTGGGAGAGGGCCAGTTTGGAGAAGTGCACTTGTGTGAGGCAGAGGGCATGCAGGACTTTTTGGATGAGGATTTGTCTATAGAGGGAAACGATGAGTCACCCCTGCTGGTTGCTGTGAAAACACTGCGGGAAGATGCCAACAAGAATGCAAGGAATGACTTCCTGAAGGAGATCCGAATCATGTCTCGCCTGAGGGACCCCAACATTGTTCGTCTGCTGGCGGTGTGTGTGGACACAGACCCACTGTGTATGATCACTGAGTACATGGAAAATGGAGACCTGAACCAGTTCCTCTGCAATCTCAGACTGAAAGAGGCTGCTGATGAAGACAAGACAGAACAAGAGGAAAAAGAGGGGGAGAGTATGGTCAGTTATAGTAAACTCATTGGCATGGCTGTGCAGATTGCATCTGGAATGAAGTACTTGTCCTCTCTCAACTTTGTCCACCGTGATCTGGCGACACGCAACTGCCTGGTGGGTAAGAACTACACCATAAAGATAGCTGATTTTGGCATGAGTCGGAACCTGTATAGAGGGGACTACTACAGGATCCAGGGCCGGGCCGTCCTGCCCATTCGCTGGATGTCCTGGGAGAGCATCCTACTGGGTAAATTCACCATGGCCAGTGACGTGTGGGCATTTGGTGTGACTCTGTGGGAGATTCTGACTCTGTGTAAGAAGCAGCCCTACTCCCAGCTCTCTGACGAGCAGGTCATTGAAAACACCGGCGAGTACTTCAGGGACCAGGGCAAGCAGGTGTACCTGCCAAAGCCTCCCTGTTGTCCTGACAGAGTCTACAATGATCTCATGCTGAGCTGCTGGAGGAGGAACGCCAAGCAGAGGCCGAGCTTTCAAGAGATACACACTCAGCTGATGGAGAGCCTGGCGTAACAAATGGAACAGATCATTTCTCTTTGCCATGCACTGTCACTGTACATGTCACATTTGCTCCCTTCAGTCTGGATATATTTGGGATCAATTTGAAATCAGAAACAACCCATCAAAtgtaaccatttgtttttagcTGACGTGCCACAATGGTGCTGTAAATAATAAGATATGAGGAGAAGGTATACACTTGAAAAGTGCcttgtgttttatatatacaAATTAGCACTGTTCACCCAGTGAATTCACTCctttgtgtatttattaatttctttttatttcctaTGCTATGTCTATTTATAGAGTACTCTATGGTAATCCtagatttaaaaacacaattgtgATTTTTCTTTCAATTTATTTTCCATACATACATCTAATTCTACTGCACATTTATTAGAAGATGTCTATACAAATGTGTGACCTTTTatgaatgtttatatttttgctttttaagGGGGAACAAATGGCATGATAATGACTGTTGTCTAGATGAGACAGGTGTTTTTACGCTGCAGCAGTTCACTGACATGTTTTATAAACATGTTTACGTCCTTTTGCAGAAATATGCATGTGTATATTGTTGAACAGTAGCCTAGTAAAGAACAAACCAAGTCAAACGAAAGATCCATGGAAATAAAGATAATTAATATTTA

Function

NR:

description
PREDICTED: discoidin domain-containing receptor 2

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0007155 cell adhesion biological_process
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004714 transmembrane receptor protein tyrosine kinase activity molecular_function

KEGG:

id description
K05125 DDR2, TKT, CD167b; discoidin domain receptor family member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816961.1 True 3361 mRNA 0.49 17 14817259 14829753
XM_039816962.1 False 3346 mRNA 0.49 17 14817259 14829753

Neighbor

gene id symbol gene type direction distance location
LOC120569101 LOC103362378,LOC100708654,LOC102196187 coding downstream 663 14811662 ~ 14816596 (-)
serbp1b serbp1,LOC108238257 coding downstream 7635 14798114 ~ 14809624 (-)
LOC120567646 pik3r3,LOC103362845,LOC104935068 coding downstream 89829 14720281 ~ 14727430 (-)
LOC120567642 ipp coding downstream 102102 14709909 ~ 14715157 (-)
gpbp1l1 gpbp1l1 coding downstream 108929 14694449 ~ 14708330 (-)
LOC120567619 LOC103362200 coding upstream 5331 14835084 ~ 14849810 (-)
rgs5b LOC100702567,LOC104966170,LOC102195627 coding upstream 32778 14862531 ~ 14863690 (-)
LOC120568704 LOC100707385,LOC103362031,LOC102195140 coding upstream 65419 14895172 ~ 14917431 (-)
LOC120568424 LOC104947192,LOC102778292,LOC101467453,LOC103361239,LOC102192915 coding upstream 210092 15039845 ~ 15044653 (-)
zbtb41 zbtb41 coding upstream 290830 15120583 ~ 15127965 (-)
LOC120569096 NA non-coding downstream 34787 14780276 ~ 14782472 (-)
G114661 NA non-coding downstream 65731 14751245 ~ 14751528 (-)
G114636 NA non-coding downstream 123302 14693632 ~ 14693957 (-)
G114633 NA non-coding downstream 127193 14689457 ~ 14690066 (-)
G114544 NA non-coding downstream 299366 14517476 ~ 14517893 (-)
LOC120568695 NA non-coding upstream 124825 14954578 ~ 14958403 (-)
G114733 NA non-coding upstream 171391 15001144 ~ 15003045 (-)
G114752 NA non-coding upstream 246388 15076141 ~ 15081980 (-)
G114836 NA non-coding upstream 434767 15264520 ~ 15266224 (-)
LOC120568803 NA non-coding upstream 557725 15387478 ~ 15393259 (-)
G114680 NA other downstream 20215 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 199035 14613613 ~ 14618224 (-)
tfr1a NA other downstream 848448 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1335034 13469531 ~ 13482225 (-)
G114152 NA other downstream 1728696 13084561 ~ 13088563 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 460329 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1314407 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1352901 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1487665 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 1501199 16330952 ~ 16335956 (-)

Expression


Co-expression Network