LOC120569114


Basic Information

Item Value
gene id LOC120569114
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24049764 ~ 24054704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816993.1
TTCCATTGTGAGTGACGTTGTAAATGCAGTTTCACAAACTAATGTCCTGCTGAAATTCACCTCTACAGGAGGATCCTTATCAACAGCTAGCAGGAGAGCATCTTATATACAGCAAGAATTTCCTCTTGTTATGCCAGTTGAGTTTCGTCTTGACAGAGATAGTTCTGTTGTATATGTCCCCACACTGAAAATGTTGCAGGCTTTGTTAAGAAATAAGGATATTCTGGATAAGGCGCTGCATGTAGAATGTGGTGCTTCACCAGAAGGATACCACTCATTCAGAGATGGCtctcattttaaagaaaatgttcttttgAATGTGGAAGAATTTAGGATTGCTCTTGGGCTATATATAGATGATTTTGAGGTTGCTAATCCACTGGGAACAtccaagaaaaaacacaaactatGTGCAGTATATTGGGTACTTGCTAATCTTGACTCCAAATATCGGTCAGCTCTCCACTCTATACAACTTGCACTTTTATGTAAGGTCAAGACTGTGAAGGAACATGGCTATGCAGAAGTTCTTCGTCCTCTCATTCAGGATCTTGTTACTCTTGAGGAACATGGTGTGTATGTTGAACAGCTAGCAGAAAGTGTTAAAGGAACTGTATTGTATGTAGCAGCAGACAACTTGGGGGCTCACGCTTTGGCAGGATTCCAGGAGAGTTTTGCAGCACATCTCTTTTGTCGGTTTTGTATGTGTAAGAAAGATGACATACAGGATAAGGAGGTCAGGTCAGGTCTACACCAGCCAAGGACAAGAGAGGACCACGACAGACATGTGCAAGAGGTTATACATGACCATACTATGGCCAGACATCTTGGTGTAAAAAGAGGGTGTCCACTGAATGAAAACTTGAAACACTTTCATGTGGTGGATGGTTTTCCACCTGACATTCTGCATGACTTTTTAGAGGGTATAGTACCAGCAGAAATGTCACTCTGTCTTCAGGATTTTATGACCAAGAAGTATGTTTCTTTGGACTGTTTGAATAAGGCTATTAAGCAGTTTCCTTACACGTTCTCAGATAAAGCTGACCAACCACAGATCATTCCAAAGACCTTCATCGCTAAGGGAACCATTGTGGGCAACGGACACGAAAACTGGGCTCTCCTGAGGCTGCTTCCATTGATGGACCATGGGAAGCTATAAACTAAGAATCATCATAAATGAAGGGGACATACGGAAAGTGTCACTGGACAGAAAACCAGAAACGGTTGAAGAGCTGaagataaaagtcaaagaaaaatGCAACCTGCAGGATGACTTCAATCTTATGTATGAAGACCCTGACTTTGGTTATTCCCTCTGCAACCTAGATGACATAGGAGACTTGCCAGCTACAAAAGCAACTGTGAAGGTCATTTCATTGGTGACACTGACACTGGTGCCTGCTTCCACCACCAGCATTTCTGATGCCTCAAATGTCTCAGATGATACAGAGATTCTGTCGACATACagctcatcatcatcaacaagaCAAGAGCAATGGCCAGA
>XR_005640838.1
GCCTGAGCCAACACATTTTCTGGAATTTGCCGACAAATTTGCTAGAGATTTCATCGCTTGTGGAACAATAAGAAGTGCTTGTGGCAACTGCCTTGAGGGCTCTTCACAGCTGCTTTGTCAGTGGGCCTCAGTACACTGGAGATAAAGCTGACCAACCACAGATCATTCCAAAGACCTTCATCGCTAAGGGAACCATTGTGGGCAACGGACACGAAAACTGGGCTCTCCTGAGGCTGCTTCCATTGATGGACCATGGGAAGCTATAAACTAAGAATCATCATAAATGAAGGGGACATACGGAAAGTGTCACTGGACAGAAAACCAGAAACGGTTGAAGAGCTGaagataaaagtcaaagaaaaatGCAACCTGCAGGATGACTTCAATCTTATGTATGAAGACCCTGACTTTGGTTATTCCCTCTGCAACCTAGATGACATAGGAGACTTGCCAGCTACAAAAGCAACTGTGAAGGTCATTTCATTGGTGACACTGACACTGGTGCCTGCTTCCACCACCAGCATTTCTGATGCCTCAAATGTCTCAGATGATACAGAGATTCTGTCGACATACagctcatcatcatcaacaagaCAAGAGCAATGGCCAGA
>XR_005640839.1
GCCTGAGCCAACACATTTTCTGGAATTTGCCGACAAATTTGCTAGAGATTTCATCGCTTGTGGAACAATAAGAAGTGCTTGTGGCAACTGCCTTGAGGGCTCTTCACAGCTGCTTTGTCAGTGGGCCTCAGTACACTGGAGATGCAGTGGACCTATAAAGCTGACCAACCACAGATCATTCCAAAGACCTTCATCGCTAAGGGAACCATTGTGGGCAACGGACACGAAAACTGGGCTCTCCTGAGGCTGCTTCCATTGATGGACCATGGGAAGCTATAAACTAAGAATCATCATAAATGAAGGGGACATACGGAAAGTGTCACTGGACAGAAAACCAGAAACGGTTGAAGAGCTGaagataaaagtcaaagaaaaatGCAACCTGCAGGATGACTTCAATCTTATGTATGAAGACCCTGACTTTGGTTATTCCCTCTGCAACCTAGATGACATAGGAGACTTGCCAGCTACAAAAGCAACTGTGAAGGTCATTTCATTGGTGACACTGACACTGGTGCCTGCTTCCACCACCAGCATTTCTGATGCCTCAAATGTCTCAGATGATACAGAGATTCTGTCGACATACagctcatcatcatcaacaagaCAAGAGCAATGGCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816993.1 True 1504 mRNA 0.42 2 24052352 24054704
XR_005640838.1 False 611 transcript 0.45 4 24049764 24054704
XR_005640839.1 False 624 transcript 0.46 5 24049764 24054704

Neighbor

gene id symbol gene type direction distance location
clcn2a clcn2,LOC102213982,LOC102290034 coding upstream 44753 23963949 ~ 24005011 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding upstream 144235 23899208 ~ 23905529 (+)
snorc NA coding upstream 152853 23891144 ~ 23896911 (+)
gigyf2 gigyf2 coding upstream 158796 23870051 ~ 23890968 (+)
trnaw-cca_13 NA coding upstream 181439 23868254 ~ 23868325 (+)
LOC120568612 NA coding downstream 75 24054779 ~ 24057075 (+)
LOC120569088 NA coding downstream 28992 24083696 ~ 24089942 (+)
cdc20 cdc20,LOC102779045 coding downstream 83451 24138155 ~ 24142097 (+)
bokb LOC103360102,LOC100707238 coding downstream 97456 24152160 ~ 24160339 (+)
kif1ab NA coding downstream 116341 24171045 ~ 24197651 (+)
G117406 NA non-coding upstream 5280 24043969 ~ 24044484 (+)
G117405 NA non-coding upstream 6223 24036655 ~ 24043541 (+)
G117398 NA non-coding upstream 28709 24019654 ~ 24021055 (+)
G117385 NA non-coding upstream 66781 23982191 ~ 23982983 (+)
G117374 NA non-coding upstream 101562 23947926 ~ 23948202 (+)
G117476 NA non-coding downstream 95754 24150458 ~ 24150771 (+)
G117487 LOC104957881 non-coding downstream 110150 24164854 ~ 24169555 (+)
G117488 NA non-coding downstream 114964 24169668 ~ 24169953 (+)
G117523 NA non-coding downstream 202850 24257554 ~ 24258831 (+)
LOC120568139 NA non-coding downstream 282989 24337693 ~ 24339256 (+)
G117400 LOC104965054 other upstream 26105 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 135266 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 141363 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 194607 23850879 ~ 23855157 (+)
LOC120567964 dpp6,LOC100710983 other upstream 363960 23592732 ~ 23685804 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 514824 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 613175 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 808292 24862996 ~ 24870087 (+)
G117664 NA other downstream 895864 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 932795 24987499 ~ 25044057 (+)

Expression


Co-expression Network