LOC120569115 (LOC103362161)


Basic Information

Item Value
gene id LOC120569115
gene name LOC103362161
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 8178285 ~ 8187676 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816994.1
TTGCTTTGTAGCCTGCCaataaaactaaagaagaagatcTTTACCACGTTTTTTTCCAAGGCATGCCACTTTTCCTCTGAACAAAtgtctaacgttacacttcAGTCGCTGAAAACTTTTATCAATCAGCGGCTCGCTGTGGCTGTTGACGAGATATCCGCGCTGCTGGAAACGACAATATCCAACTATGAGGAAGAGATTAACCGCCAACGCAAGATGCTGGAAGACGAGAGGTCTGAGTTCCTGATCAGCAAAGCAGATATGCAACATGCAGCGAGATTTCGAGTCATCATCGATCATGATATCAGGAAgataacatttcaaaatggCATCCCCTCATCTGTGGAGGACTTAATTAAAGTGTTGAAACAGGCTTTTTCCATCACCACAGACATAGGACTTCAGTACAAGGATGCTGACTTTGATGACTTCTTCACACTAACCACTACAACAGACCTGAAAGATAAAGACACACTCAAAGTTGTGCATGTGCCACCAGGCATAGCAATCACCACGCTCCCTCAGGAACGCAACCCCGACACCTCTGACGTGTCGTCTGCGGATGTCCCGCTCTCTGTGGATTCACAAGACACTGTGATCCCCAGTCCCCCGGGCACTGAGAGGCAGAGCCTGTGGCCCGCCATCTTTCCCATCCCGTCCTTCTCCTACAACACCGAGATGGCTCTGAGGCAAGGCAATGAGAAGTTTCTAAAAGATGGAACCCTGCTGACGTCGCCATGTGTCAAATCGGACATTCTGGAGCGCCTGGCGGAGGCCATGTTTTCCTACACGGCTTATCCCAATGATCCACAGAGGGCTGCAGTTGCACAGTCACTAATAGAGAAGCATCCGTGCTTGAGAGAGCCCGGCTCTCATAACGGATGTTATGGCTGGCAGCAAAGCCTAAAATACAAATGTGGAAACTATCGGAACAAACTTAAAGCACACGGAAACCCCGAACTGCTAATAAATACACTAAAACACAAGCAGGACGGCGACAGGAAACCTGCCAAAAATATCAAGAAACCGAGGAAATCGGAGGTAAACTACCTCCCCCCACATCCAGCCGGTGAAACGGAGGACAGCCTGGAGAATATGAGACTTGAGCTTATTGCTGCAAAGGGCAATGGTCAGATGATAAATGACATGATGTCCCGAACGTACAGCTGTAGAAGACGGGAAGTGGTCGGCCAGTCCATGCAGGTGGCAGAATTCAAAGAGAGATGGCCTGCCCTTTTTGATCCGTTACAGATTAACGAAGAGTTCCGAAGGTGCAACACTATTCCCCTGGAGTCGACATTTTTCTCGCAGCTGGACAGGTACACGCCAAAGCTCCTGGAATTATTCAGCTCCAAGGGAGGAGCCGTTGGACAGCGCATGAAGAGTTTGTTTGCTGAACTGATACAGGACCCATGTGCCTCAGTGGTGAAGAAGAGGGACGTGACTCTGAGATGCCTCGTCGAGTACCTGGGGGAGAGTGTGCAGGAGCTTGTCTCTGACTACTATAGAACAGCAGAGGATGAAGTGCATCAGGAACTTAGAGCACAGAGCATGAGGATCTACGTTTGTCACAAGCCGGATGCAGTGGGCATCATCATCGATGGAACGCCAGTGCTGACCGGTGTGGGGAACGTGTCCAGAGCCTGCTGCCTTCTCCTCGGCCTCACCTACGCCCTAAATCTGGATTATCCTCCCAAACTCGCCAGAACTTTTGAAGTATTTCAAAGGCTATTCGTGGGACTCGATATGCTGCAGCCGAAACCGACCTCAAAGTACATCAGCCTGAAAAACAAGCTCCTCGCCTAAACAATCGCTCTGAGCTTTTTGGTCCGAATCAACCCATCCAAGGCTCATGTTTTGTGAACCGTGTTAACATTTGGGAGCTGTAAAGGTGTCTGGTTATCTGATGATGAGGATTGTATTGAATGTTGTAAGACCTGTGTTAACGACAAACACTGAGCTGTACTTCAGAGCTTGGAGCAAGTTAAGACTGACTGCTTGCTAAAGACACATTTGGCACATATTCACTGCAGTTCCAGGTACACTTCTATAATACGGCAGTGCACATCCTGCCTTTGTCAGGtaggtcagttcacccaaattaccaaaagaaaaagatttcACCGTGTTTCAgggacttaaaggtcccatggcatgaagatttcactttgagtttttttaacatt

Function

NR:

description
PREDICTED: uncharacterized protein LOC103362161

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816994.1 True 2186 mRNA 0.48 5 8178285 8187676

Neighbor

gene id symbol gene type direction distance location
LOC120568280 LOC104938035,LOC103362163,LOC102210891,LOC102784122 coding downstream 19497 8150224 ~ 8158788 (-)
ccr12a LOC101473018,LOC104945947 coding downstream 31393 8140232 ~ 8146892 (-)
cntnap2b LOC101476225,LOC102211470 coding downstream 41728 8103401 ~ 8136557 (-)
LOC120567605 LOC101471767,LOC104938020,LOC102193348,LOC100709377,LOC103374359 coding downstream 92359 8079296 ~ 8085926 (-)
tmem70 NA coding downstream 110836 8063083 ~ 8067449 (-)
tgs1 tgs1,LOC106942483,LOC106912366 coding upstream 1727 8189403 ~ 8203101 (-)
xkr4 xkr4 coding upstream 44598 8232274 ~ 8249635 (-)
LOC120568351 LOC103362164 coding upstream 69976 8257652 ~ 8283049 (-)
LOC120568719 LOC103362165,LOC102298204,LOC100711787,LOC101471174,LOC102214684 coding upstream 97254 8284930 ~ 8313389 (-)
LOC120568861 dnajb6,LOC104936025,LOC102214955,LOC101470590,LOC100708567,LOC102785555 coding upstream 130871 8318547 ~ 8332839 (-)
G112903 LOC104931871 non-coding downstream 118252 8056602 ~ 8060033 (-)
G112902 NA non-coding downstream 132804 8044110 ~ 8045481 (-)
G112876 NA non-coding downstream 208951 7967433 ~ 7969334 (-)
G112877 NA non-coding downstream 211980 7964439 ~ 7966305 (-)
G112887 NA non-coding downstream 252093 7924102 ~ 7926192 (-)
G112922 NA non-coding upstream 23151 8210827 ~ 8211057 (-)
G112924 NA non-coding upstream 24444 8212120 ~ 8212771 (-)
G112923 NA non-coding upstream 28233 8215909 ~ 8219170 (-)
G112980 NA non-coding upstream 266815 8454491 ~ 8454705 (-)
G112984 LOC104949840 non-coding upstream 310057 8497733 ~ 8497975 (-)
cdh6 LOC103366829,LOC104926815 other downstream 1014615 7076609 ~ 7163670 (-)
si:ch211-267e7.3 LOC103370300 other downstream 1188163 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 1441773 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 1999399 6172281 ~ 6178886 (-)
G112328 NA other downstream 2325838 5793163 ~ 5852447 (-)
trnak-uuu_16 NA other upstream 299791 8487467 ~ 8487539 (-)
G113070 NA other upstream 592776 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 926708 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 1213111 9400787 ~ 9510497 (-)
brinp2 brinp2,LOC103369811 other upstream 1853010 10040686 ~ 10267078 (-)

Expression


Co-expression Network