LOC120569116 (LOC107667722)


Basic Information

Item Value
gene id LOC120569116
gene name LOC107667722
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35165658 ~ 35168716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816995.1
TCATCACATCCGGTTCAGGTCCGCTGTACCTGGCTGTACCGCGGTACTTTGGATATGGCGCTGTTTTACTCCAGATGCCTTCAGGAATTACCCAAAATGAGCATAACTGATGTCCATCGCATATGCAGGTTGACATCTAAAACTCCTGCCTCCAAAATGGACAAGGGGTTTAGGCTATACGCCTCCTCATACATATTTGACTACGAAGATAGTGCTTCGGGATTCGGACCCTGTCATCCTAACATCAAATCGGTGCTCATGTGTAGCTGGCACTGCAATGTGTAACCACACAGTTGCTTTGCTGTTTCAAACTGCACACTATTCAGAGTTGAACATGCAGGTTGTGCCACCTGTCCACACCTGCACTGAGACAGAGCAGCAATGGCATAAGCCCAGAACAGCGGGAGTGAAACCTGGGCCAATAAACAAAACGGTCATCAGCAGACCAAGACTCAACCGGCTCACGGAAGGAGGAGTCAGGAGTACACTCTACAAGGGCTTGGTTGGGGACCCACTAGACATCTCTTTGCTACTGATTGGAGACATGTACAAAGACTTCAGCATTAGAGAGAAACCTCTAGCAGCAACTATGGGCATCAGTGACGAGAAGACCCTTGTTGAGACAGCTTTTGGCTTAGCACAAAGGGGGAGTGTGCTCTCATACCAGCAACCTGTATTGCCCACAAAGTCAGTCAAGATGCACCAGGATCCTCCACCTTACCCACCGCTGCCTATTGGGGAGTACAAGCTTGCCCCGAcagactgtgtgcatgtgtgcactgAGGAGGAGCACTTCCACCTTAAAAGCCTGAATGTCACACTGGACATGGCCTATAAGATTGAGGCAGCGACAAGAGAGCAGGCAGCAGACCAGGAGTGGCATCAGCTCCGCAGGCCTAGGATCACCTCCTCACGTTTTAGAGAGGTGTGTTTTGTGAGGGGAGTGAGCTCTGCAGAGTCTCTTGCAGAAAGAATCCTCAAAGGAACAAGGCAGACTGCAGAAATGAGAAGAGGTGCAGACATGGAGTTTGAGGTGGCAAGGGAGTACTGCCAGATGAAAAATGTCAACTACACACCCTGTGGCCTCGTCATCCACCCAGATGCTCCTTGGCTTGGTGCCTCGCCAGATGGCTTGATTTTTGATCCATTCGCACAGCCACCGTTTGGACTGGTTGAGATAAAGTGCCCTAATGTGAAGAACTATGTGGACTGTAAATACCTTCAAATGCAGGATGGCACTTTGGCTCTTCGTAAAAGCCACTCTTACTACTGGCAGGTGCAGGGTCAACTGTTGATCACTGGCCTGCAATGGTGTGACTTTGTGATTTGTGCTCAGGAAGACATGCTGGTGCAGCGTATCCAGGTTGACCCAGAGGTAAAAGCAGTCATCAGAGAGAGGGTGGACCAGTTTTATTTTAACGTGTACATGCAGAAGTACTTGTCTGTCTCCAAAAGAGCTTACTGATCGATGCAGGATAATTCAGGTGGGGGCCTTTTTTATGAAGAAAAATGAAATTACCTACTATaaacttttgttattgtgtgaaGCAGGAGTAAATAACATGTCATGCCTTTCAGCTGAATTTGGAAAATGTATTGGCTTATTTCACTATTGTATTGTTCTATTACAAAACCTATTCACCTGTTA
>XM_039816996.1
GTAACGTTAGGGATGGGTTGGGTGTTCTGTTCGGGTTCTCAATCTGTTCCAGTTCAGGGACAGTATTTATCAAGCCTCTCAGGGTAGGAGTAAGTAAGAGTGGACTAATCAGTGATCATGACCGGGTCCCCTTGACTGTCTAATCACCATAGACAGACTTGCAGGAGCTGCTTTAGTCTTGAGACGCTTGGTAAATGCATGCACAGTTGTTCCAagttcaatgttgttgtttgtCTACTTGTTAAAAGATGTGTATAGTGAGGTTACTGGGGTATAGGTGACTCTGATTGGACATCCTTGATTCTTGAGTGCCATCATTCCATGTTATTCATAATACGTCCTATAAAAATCCCTCTATTACAGCATGAACACATTCTGTTATTGTGTTTGTTGTAATAATGTCATTGCCATTAACCATTGCCAAACTTGCCCCAGCAACCTAACTAGACTGTTACTCAAATCAGTGGCATCTGTTAGAACCACTGCTCAAATATGATACATTAAAGCTCAACCACACTCAAATCTTTGTCAATGTTTGTAAAAATTTCTCTCCACATACTTTTGTACAGATAGTGCTTCGGGATTCGGACCCTGTCATCCTAACATCAAATCGGTGCTCATGTGTAGCTGGCACTGCAATGTGTAACCACACAGTTGCTTTGCTGTTTCAAACTGCACACTATTCAGAGTTGAACATGCAGGTTGTGCCACCTGTCCACACCTGCACTGAGACAGAGCAGCAATGGCATAAGCCCAGAACAGCGGGAGTGAAACCTGGGCCAATAAACAAAACGGTCATCAGCAGACCAAGACTCAACCGGCTCACGGAAGGAGGAGTCAGGAGTACACTCTACAAGGGCTTGGTTGGGGACCCACTAGACATCTCTTTGCTACTGATTGGAGACATGTACAAAGACTTCAGCATTAGAGAGAAACCTCTAGCAGCAACTATGGGCATCAGTGACGAGAAGACCCTTGTTGAGACAGCTTTTGGCTTAGCACAAAGGGGGAGTGTGCTCTCATACCAGCAACCTGTATTGCCCACAAAGTCAGTCAAGATGCACCAGGATCCTCCACCTTACCCACCGCTGCCTATTGGGGAGTACAAGCTTGCCCCGAcagactgtgtgcatgtgtgcactgAGGAGGAGCACTTCCACCTTAAAAGCCTGAATGTCACACTGGACATGGCCTATAAGATTGAGGCAGCGACAAGAGAGCAGGCAGCAGACCAGGAGTGGCATCAGCTCCGCAGGCCTAGGATCACCTCCTCACGTTTTAGAGAGGTGTGTTTTGTGAGGGGAGTGAGCTCTGCAGAGTCTCTTGCAGAAAGAATCCTCAAAGGAACAAGGCAGACTGCAGAAATGAGAAGAGGTGCAGACATGGAGTTTGAGGTGGCAAGGGAGTACTGCCAGATGAAAAATGTCAACTACACACCCTGTGGCCTCGTCATCCACCCAGATGCTCCTTGGCTTGGTGCCTCGCCAGATGGCTTGATTTTTGATCCATTCGCACAGCCACCGTTTGGACTGGTTGAGATAAAGTGCCCTAATGTGAAGAACTATGTGGACTGTAAATACCTTCAAATGCAGGATGGCACTTTGGCTCTTCGTAAAAGCCACTCTTACTACTGGCAGGTGCAGGGTCAACTGTTGATCACTGGCCTGCAATGGTGTGACTTTGTGATTTGTGCTCAGGAAGACATGCTGGTGCAGCGTATCCAGGTTGACCCAGAGGTAAAAGCAGTCATCAGAGAGAGGGTGGACCAGTTTTATTTTAACGTGTACATGCAGAAGTACTTGTCTGTCTCCAAAAGAGCTTACTGATCGATGCAGGATAATTCAGGTGGGGGCCTTTTTTATGAAGAAAAATGAAATTACCTACTATaaacttttgttattgtgtgaaGCAGGAGTAAATAACATGTCATGCCTTTCAGCTGAATTTGGAAAATGTATTGGCTTATTTCACTATTGTATTGTTCTATTACAAAACCTATTCACCTGTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107667722

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816995.1 False 1648 mRNA 0.48 4 35165658 35168716
XM_039816996.1 True 2009 mRNA 0.46 3 35166147 35168716

Neighbor

gene id symbol gene type direction distance location
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 340837 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 389509 34776078 ~ 34776149 (+)
trnam-cau_25 NA coding upstream 393437 34772150 ~ 34772221 (+)
trnar-ccu_3 NA coding upstream 393512 34772074 ~ 34772146 (+)
LOC120568807 LOC100693392,LOC103352799,LOC101161005,LOC103131440 coding upstream 399327 34743728 ~ 34766331 (+)
LOC120567912 NA coding downstream 92842 35261558 ~ 35262902 (+)
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding downstream 262963 35431679 ~ 35443813 (+)
pold3 pold3,LOC107703443 coding downstream 1280321 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 1397045 36565761 ~ 36583870 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 1419938 36588654 ~ 36620596 (+)
G120411 NA non-coding upstream 154616 35010181 ~ 35011042 (+)
G120410 NA non-coding upstream 159852 35005594 ~ 35005806 (+)
G120397 NA non-coding upstream 200118 34965146 ~ 34965540 (+)
LOC120568917 NA non-coding upstream 211251 34953325 ~ 34954407 (+)
G120393 NA non-coding upstream 260268 34905146 ~ 34905390 (+)
G120483 NA non-coding downstream 36396 35205112 ~ 35205709 (+)
G120497 NA non-coding downstream 151205 35319921 ~ 35320221 (+)
G120498 NA non-coding downstream 170023 35338739 ~ 35339004 (+)
LOC120568837 NA non-coding downstream 390625 35559341 ~ 35560910 (+)
G120526 NA non-coding downstream 479744 35648460 ~ 35648739 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 474038 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 557902 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 708047 34453722 ~ 34457611 (+)
rps28 NA other upstream 761657 34400748 ~ 34404001 (+)
G120200 NA other upstream 847892 34317148 ~ 34317766 (+)
LOC120568940 NA other downstream 426162 35594878 ~ 35642033 (+)
G120716 NA other downstream 1236524 36405240 ~ 36405773 (+)
G120717 NA other downstream 1237405 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 1711202 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 2134178 37302894 ~ 37306014 (+)

Expression


Co-expression Network