LOC120569119 (LOC101466820,LOC102797643,LOC103353954,LOC100700019)


Basic Information

Item Value
gene id LOC120569119
gene name LOC101466820,LOC102797643,LOC103353954,LOC100700019
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17165891 ~ 17176411 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816998.1
cacacacacacacacacacacacacacacacacacacaccacgagCTGGATTCATTAAAAATCGAGAGAGGCAGCTGGATGATGTCATATCCGTGAAGAAGGCTGCATGCATGCCCACAAACTTTTTCTCCTTCTTGCATTGACGAGGTTTCTCCCCGCTGCCCACATGGCATGCGTAACGGGGACGAGTGGATGGATGAGCCCCCCTCCTCCGCAGGAATCCATGTTTTTTACCAGCGCGTAGTGGACGAGGTGGCGCGAGCCTACAAGCAAAAACTTGCGTGAAATTGTTGTACTCGTCGCGGAGAACGTGGAGGAGGGAAACATTGCAGACGACAGAATGTGGTCGCTGTCCGTGGTACTGAACCCGCTGCTGTTCCTGCTGCTGTTCGGATACTGCCCTTCTGTGACCATCAGGCCAAAGGAGGGGTGGCAGGTGTACAGCTCAGCTCAAGATGCAGATGGCCGTTGTATCTGCACAGTGGTGGCACCTGAACAGAATCTGTGCTCCAGAGATGCCAAAGGCAGACAGCTCCGCCAGCTCCTGGAGAAGGTGCAGAACATGTCGCAGTCAATCGAGGTGCTGAACCTGCGGACGCAGAGGGACTTTCAGTATATCATGAGGATGGAGAGCCAGATCAAAGGACTGCGGTCAAAGTTTCGACAGATCGAATCGGACAGGAAGACGCTCGTCAACAAAAACTTTCAGGAGCTACAGGGAAAGATGGAGTCCCTGCAGCCGCTGATTCCTGTCCTGGAGCAATACAAGGCAGACGCCAAGCTCATCTCCCAGTTCAAAGAGGAGATCAGGAACCTGTCGGGCGTGTTGATGGGCATCCAGGAGGAAATGGGAGCCTACGACTATGAGGAGCTGCAACAGAGGGTCCTAAACCTGGAAAATCGGCTTCGCAACTGCATGAGCAAACTCACATGTGGCAAGCTAATGAAGATCACTGGGCCGCAGACTGTGAAAACTTCAGGGACCAGATTTGGAGCCTGGATGACCGACCCACAGGCGTCTCCCAAAAACAACAGGgtcTGGTACATGGACAGCTACACCAACAACAAGATAGTAAAAGAGTATAAATCCATACCTGATTTTGTGGCAGGAGTTGAGTCGAGAACCTACAACCTGCCTTTCAAATGGGCTGGAACCAACCACGTGGTGTACAATGGCTCTTTGTACTACAACAAGATGCAGAGCAACATCATAGTGAGGTACAGCTTCGAGACGGGCCGTGTGGTCACCCAGAGGGCTCTAGAGTCAGCGGGGTTCCATAATGTGTACCCTTACACCTGGGGAGGCTTCTCCGACATTGACATGATGGCTGACGAGCTGGGCCTGTGGGCTGTGTATGCGACCAACCAAAACGCGGGGAACATTGTCATCAGCCAGCTGAACCCGGACACGCTCCAGATCCTCAACACATGGAACACAGAATACTCAAAGAGGAACGCCGGCGAGTCTTTTATAATCTGTGGAACACTCTACATCACTAACTCCCACCTGACCGGTGCCAAGGTGTACTATGCTTACTCCACTAAAACCTCCACATACGAGTATACAGACATTCCCTTTCATAACCAGTACTTCCACATGTCTATGTTGGACTACAATGCAAGGGACCGCGCCCTCTACGGCTGGAATAACGGCCACCAGGTCCTGTTTAATGTTACACTTTTCCACATCATTAAAACTGAGGATGACTCTTAAGCAGAGGAACATACTGTACTCATGaaagaaattatgaaaatatagaataaaatGGATAGTTGCGCCTGAATGTtctaatgcatttatttatttatgtattgtttCCGGTtagttttgggcattttagacAACTTACGTACCAACATCTTGCTATTTGCTTGTTTTCATATGAAGAGTTTGTTAATTAATCTATTCTCCGTGTGGAAACTTTCTCTATAGAAAGTAAATGGCAGgacaaaattaaaacacatcGGAGCATTTGCTGGTCAATGAACTTTCCGTAATATCCGCAGTTCCTTTCTCTTTCCAAAATGAAAGCCTTTTCCAAAATTAAGTCTTCAAATTTATAATGGTTTTCTCATTCAGTattgcatttattcatttccCCTAATGTATTCATATTTTGACCGTGTTCACTAATTGTTCGTTTTGTTTCCATTCTTTCCTTTCCATTTATTCATCATCTGCTAATTTATTCCTGCCTTTCACTGTCTCAATTTAGCTTTTAGAGTTATCTTTGTACTTTTCCTTTCAAGTTTTTTGCACTTGACCTTGTACACACCTTGTACACAGACAATGAGAAATGTGGTAAACCATGCACCTGTATAGTTACTGTACTTGGCTTTTGTGTATGAACATTCTCAATCATCCAGGTAATAGGATATCTTGAAGTACTAAGTTAAAGTACTTCAGCAAACAACAGTTTGCCTTTAATTGAGTACTTTGAGatattagtttttttgtaaCTTTAGCAACAGTTTGTATGCCTTATTCATTGCAGTATGTTCTGTAAGCCCAATGATAACAGCTCTAGTGCATGAATGTTGGCTATACTTATAGCATTTTTCTGtaactgtatatctgtatattttGTATCTACACAACATCCCATTCTCCTCCTCTCTAGCTATATTAGTGGTCTGTTTATACAGACAGGAGTATATAACTTTAATAATCATTCATTTGTGTATATAAGAAGTTATACATAACCtaaataaaagtattgttttcatTAAGTCA

Function

NR:

description
noelin-3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816998.1 True 2734 mRNA 0.44 6 17165891 17176411

Neighbor

gene id symbol gene type direction distance location
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding downstream 143498 17020735 ~ 17022393 (-)
LOC120568369 ptprm,LOC102799796 coding downstream 150265 16847810 ~ 17015626 (-)
LOC120567917 tmem200c,LOC104967041 coding downstream 345857 16814692 ~ 16820034 (-)
LOC120568957 LOC103353943 coding downstream 411125 16751993 ~ 16754766 (-)
LOC120568912 apcdd1,LOC102777074 coding downstream 453627 16685480 ~ 16712264 (-)
LOC120568842 LOC103353955,LOC104931259 coding upstream 6751 17183162 ~ 17275789 (-)
LOC120567855 NA coding upstream 120644 17297055 ~ 17298924 (-)
LOC120569062 LOC103353959 coding upstream 315876 17492287 ~ 17542090 (-)
ndc1 ndc1 coding upstream 379569 17555980 ~ 17564537 (-)
zgc:113691 LOC103353967,LOC104931261,LOC102192286 coding upstream 388300 17564711 ~ 17567046 (-)
G115435 NA non-coding downstream 1196 17164369 ~ 17164695 (-)
G115434 LOC103353952,LOC100690840 non-coding downstream 24674 17137754 ~ 17141217 (-)
G115433 abca4,LOC108232920,LOC100690840,LOC102789304,LOC102216210,LOC101466350 non-coding downstream 30078 17133873 ~ 17135813 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding downstream 42833 17122722 ~ 17123058 (-)
G115429 NA non-coding downstream 44845 17119921 ~ 17121046 (-)
G115458 NA non-coding upstream 125853 17302264 ~ 17302558 (-)
LOC120568661 NA non-coding upstream 179940 17356351 ~ 17357209 (-)
G115563 dcaf8 non-coding upstream 371809 17548220 ~ 17552950 (-)
G115568 NA non-coding upstream 396486 17572897 ~ 17573129 (-)
G115570 lrrc42 non-coding upstream 397052 17573463 ~ 17574125 (-)
ly97.3 NA other downstream 56987 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 120829 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 353973 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 526079 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 829935 16330952 ~ 16335956 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 876573 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1304259 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1526653 18703064 ~ 18720587 (-)
G115941 NA other upstream 1668494 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 1755563 18931974 ~ 18935491 (-)

Expression


Co-expression Network