pex5lb (LOC102798103,LOC101487249)


Basic Information

Item Value
gene id pex5lb
gene name LOC102798103,LOC101487249
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1226050 ~ 1287799 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817012.1
AGCTCGGGCTCGGCTCGGCTCTGCTCGGTTTATTTTCATCCCGCCCTCCCATCTCCATCGGAGCGGAGAGAGATGATATGCGGACACCGCGGCGTTTGGGTGCTTTGGAGTCGGACAGGCTGGACAGAACGGACCGGGAACCAGAACGGACGCGGAGGCAGTGCAGACACCGGGATATCGGCGTTATTTTGCGGCGGTGACAGAGCTGAGAGGCCCCCCGGAGAGGAACCGAAGAGACACCCAGCGGTTCGTTGCAGCGGAGCCGGGTTTGGTGCACTGCTGGCGGCTGCAGCTCCAGGCTGGAGGGCTGACTCAGAGACATGTACCAGGTCCAGGGGAAAGGGGACAGGGTCGTTGCCATGGTGCTGAAGGAGCTTCCTGGTAAAAAGTCAACCTCAGAAGGAAACGCCCTCCTCACCGTGACAACCAAGATGGTCCGGGAGCAGCAGGAGAGTCGACCTCTGCTGAGTCCCTCAATCGATGACTTTCTGTCGGAGAGCCGCAGCGATGCGTCCTCCTCCAGCCGCCCCCTCACCTCCAACACAGCAGTCCTGTCCACGGCTCTGGACCTGGTGGACCTCAGTGAGCCCGGCGGTTGCCGTGGTAACACAGAGCACCTGAGCGAGCCGGGCGGTTGCCGCGGTAACACCGAGCAGAGGAGGAGTCCCGTGAGGAGAAAGGGCGGCTCGCGGAGTCCCCGACGCCAGACCAGACCGGAGGAGACGGAGCTGATCCAGGTGGAGACGCAAAGTCCCATCTCTCTAGACTCAGTCAGTCTGCCGTCTCCTCGGGACAAATGGGACGAGGTGAACCTGGACGTGGAGGACGCGGGAGGCAGGACGAGAGACGAGAGGCGCTGCACCTCCCACCACTCCTCCAGCGAACTGCTCTGGTCTGCAGAGTTTAAAACTGATCCTCTAACGAAGAACTCCTTCGACATCCACAGCTTCGATGATCTTGACTTCATACCTTCATCACAGgactGCGCGGCATCCAGACAGCACAGAAGAACGCGTTCCCTTCTGGCGAGCAAAGAGTCTCTGGAGGACGAGTTTGTCAGAGCGAAGGCTGCTGtggagTCGGACACCGAGTTCTGGGACAAGATGCAGGCCGAGTGGGAGGAGCTGGCTCGGAGGAACTGGCTGGAGGACTCTGAGGGCCAGGGTCCGATCCCGCCCGCGGCCTCGCCTGCCGAGAAGggCTACTTCTTCAACGCCAACAACCCGTATCGGGACGCGCCCAGCGCCTTCGCCGAGGGTCAGGAGAAGGCTCGGGAGGGAGACCTGAACGCCgccgtgctgctgctggaggcCGCCATCCTGCAGGACCCACAGGACTCTGAGggAAATGGGGCGACTCAGGCTGAGAACGAGAACGAACAGGCCGCCATCGTGTCGCTGCAGAGGTGTCTGGAGCTCCGCCCCAACAACCTTCCGGCTCTCATGGCGCTCGCCGTCAGCTTCACCAACAGCGGCATGCAGCGGGAGGCGTGTGACGCTCTGCGCCGCTGGATCAGCCACAACCCCCGCTACAAACACCTGGCTCTGGACCGCAGCAGCCCGCTACAGGGTTCCCCGGCCACGCCACGCAGGGTCTCCCACAACACCTCCAGGGGCCCCCACAACACCTCCACACCTGCCAGctctgAGCTGCAGGACGTGCTGTTTCTCTTCCAGGAAGCGGCTCTGTTGAATCTGGACTGTGTGGATCCAGACCTGCAGACCGGACTCGGAGTCCTCTTCAACCTCGGCTCGGACTTCAACAAAGCTGTGGAGGCGTTCAGCGCAGCGCTGTCCGTCAGACCACAGGACTACCTGCTGTGGAACCGTCTGGGCGCCACGCTGGCCAACGGAGACCGCAGTGAGGAGGCGGTGGAGGCGTACGGCAGAGCTCTGGAGCTGCAGCCTGGATTCATCCGGTCCAGATACAACCTGGGGATCAGCTGCATCAACCTGGGGGCTCACAGGGAGGCGGTCAGTAACTTCCTGACGGCTCTGAACCAGCAGCGGCGGAGCCAGCGCTGCAGCCATCAGCAGATGTCGGCTAACATCTGGGCCGCCCTGCGCATCGCCGTCTCCATGCTGGACCGGCCCGAGCTGTTCCAGGCCGCCAGCGCCGGCGATCTGGACCTGCTGATGCGGGCGTTCGACGTGGCCGACGTCTGACGGACCGGAGGCGTCTCCCGGGGAACGGTGGAGTCCCGCTGGAGGTGGACAGTTTGGGTCGAAACCAAAGAGATGGCCACCGGGGGTGTAGTGCTGTTTGTCGTTGACCGGAGAGCTTCGTAAAGTCGTGGCTCCATTGGAAGGTTACGTAACCGCTGGTCCTACACATGAGTCCACTGGTTCTACAAGCTGTTTTCAATAATGTCCCcctttgaacagtgtttttaagccatgtaccccctaaccagTCTCTGTAGAGAGGAAGAATACAGCGCTGTCAGccatttactaaacaacagccttggacctggaacaCATTTAGATGATGATGgagaaaggagacaaaaacctggaaaaacacagtagaaagaaggaaggcaacaccAGGGTGACAAAAGTGGGggcgtaccccctgcagtcctccagagtaccactagggggacacgtacccttgcagtcctccagagtacccctagggggacacgtacccccctgcagtcctctagAGTGCCCCTAGGGAGACACATAccacctgcagtcctccaaagtacccctatgGTGACACGTAccacctgcagtcctccaaagtacccctagggggacacgt

Function

NR:

description
PEX5-related protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817012.1 True 2772 mRNA 0.61 14 1226050 1287799

Neighbor

gene id symbol gene type direction distance location
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 11574 1208168 ~ 1214476 (+)
wdr33 wdr33 coding upstream 25469 1152120 ~ 1200581 (+)
LOC120568483 NA coding upstream 162651 1040826 ~ 1063399 (+)
LOC120567933 LOC106676760 coding upstream 186742 1035370 ~ 1039308 (+)
LOC120567938 NA coding upstream 199226 1023627 ~ 1026824 (+)
LOC120567879 NA coding downstream 156364 1444163 ~ 1444665 (+)
LOC120567883 NA coding downstream 162590 1450389 ~ 1459918 (+)
LOC120567882 NA coding downstream 176303 1464102 ~ 1464596 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 601324 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 610256 1898055 ~ 1906798 (+)
G111060 NA non-coding upstream 19544 1205789 ~ 1206506 (+)
G111052 NA non-coding upstream 24552 1141040 ~ 1201498 (+)
LOC120568205 NA non-coding upstream 40622 1183593 ~ 1185428 (+)
LOC120568206 NA non-coding upstream 47418 1177298 ~ 1178632 (+)
G111012 NA non-coding upstream 165303 1060314 ~ 1060747 (+)
G111092 NA non-coding downstream 96141 1383940 ~ 1384169 (+)
G111093 NA non-coding downstream 97405 1385204 ~ 1385497 (+)
G111096 NA non-coding downstream 103481 1391280 ~ 1391674 (+)
G111101 NA non-coding downstream 124130 1411929 ~ 1469023 (+)
LOC120567880 NA non-coding downstream 229254 1517053 ~ 1517513 (+)
cdyl cdyl other upstream 133287 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 223496 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 469552 737805 ~ 756498 (+)
G110789 NA other upstream 610054 612113 ~ 615996 (+)
G110768 NA other upstream 700899 523450 ~ 525151 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other downstream 34415 1322214 ~ 1342351 (+)
G111106 NA other downstream 152854 1440653 ~ 1441147 (+)
LOC120568494 NA other downstream 164075 1451874 ~ 1683286 (+)
G111112 NA other downstream 216810 1504609 ~ 1505015 (+)
LOC120568489 NA other downstream 264612 1552411 ~ 1553341 (+)

Expression


Co-expression Network