aire


Basic Information

Item Value
gene id aire
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24220237 ~ 24223598 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817014.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCACTCATTGCCCAGCCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAATGTGCTTGTGTTTGCTAGAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGctcGCCCCCGTGGTTCAAAACACACTAGGTCATGATCAGAGCTCCTCTGTCCTTGAGCCCACCCTCCATAAAGATGATCTGGACTCCATCCTGGGAGACCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817015.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAATGTGCTTGTGTTTGCTAGAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGctcGCCCCCGTGGTTCAAAACACACTAGGTCATGATCAGAGCTCCTCTGTCCTTGAGCCCACCCTCCATAAAGATGATCTGGACTCCATCCTGGGAGACCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817016.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCACTCATTGCCCAGCCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAATGTGCTTGTGTTTGCTAGAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGctcGCCCCCGTGGTTCAAAACACACTAGGTCATGATCAGAGCTCCTCTGTCCTTGAGCCCACCCTCCATAAAGATGATCTGGACTCCATCCTGGGAGACGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817017.1
AGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCACTCATTGCCCAGCCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAAAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGctcGCCCCCGTGGTTCAAAACACACTAGGTCATGATCAGAGCTCCTCTGTCCTTGAGCCCACCCTCCATAAAGATGATCTGGACTCCATCCTGGGAGACCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817018.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAATGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAATGTGCTTGTGTTTGCTAGAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGctcGCCCCCGTGGTTCAAAACACACTAGGTCATGATCAGAGCTCCTCTGTCCTTGAGCCCACCCTCCATAAAGATGATCTGGACTCCATCCTGGGAGACCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817019.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCACTCATTGCCCAGCCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAATGTGCTTGTGTTTGCTAGAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA
>XM_039817020.1
CACAGTCACTTGTCTTTCCTTTTCAACGTGTATATTTGCTTTTGTATGTTACATGTTCTGTATCTGAGTAGGTTCAATATAACGATGATGAGTGTGCCGTTTGTAAGGACGGAGGGGAACTGATTTGTTGTGATGGCTGTCCTCAAGCTTTTCATCTGACCTGCCTGGACCCTCCGCTCACATCTATACCaagTGGCACTTGGCGGTGTGAATGGTGCTGTGGCAACAGAGTGAAAATAGAGAATGCCCAACTACCCTTACAACCACTCATTGCCCAGCCGCAGCAAACAAACATGAGCTCCAGTAACTCCATCATAGACGTCTCCTTCTTCACCTCGCTGTCGTCCTCCTGTCTCACCAGTGTCACAGCTTCTATGAATGAGCTCAGTGGGAGAAACCAGTGCTCAGGCGCAGAGCTGCTCAGTATGGGGGAggtgtgtggtgtttgtcaCATAGAAGGAGGAGACCTGACTCACTGCCTCCAGTGTTTGCAGCGCTTCCACGAACACTGCCATGACTCCAAAGGGAGAGCCATCTGCTCGTCCTGCTCCCGGCCCTGGGGCAGCTCTGCAGAGAAGGAGGCGGAATCATCCAAAAGCTTACAGCAGGGCTCCATTGACGGCATCTTGCAGTGGGCTTTCCACAACATCTCTCGGCCTCTTCCAGACTCTCAAGGATACTACCAGTGACTGGTAGATGATCTGCACTCATCTAAGAGCTCTCACAGTTTGAAGTTATACCATGAAGTAACAATGATGACATGAACATACCTAATATAAATGGAGATTACTGGATATAGTGGAGATTATATTCTTGTTTCCTGGACCTGGA

Function

NR:

description
PREDICTED: autoimmune regulator isoform X2

GO: NA

KEGG:

id description
K10603 AIRE; autoimmune regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817014.1 True 948 mRNA 0.49 7 24220237 24223598
XM_039817015.1 False 933 mRNA 0.49 7 24220237 24223598
XM_039817016.1 False 945 mRNA 0.49 7 24220237 24223598
XM_039817017.1 False 927 mRNA 0.49 7 24220240 24223598
XM_039817018.1 False 850 mRNA 0.49 7 24220237 24223598
XM_039817019.1 False 849 mRNA 0.49 6 24220237 24223598
XM_039817020.1 False 831 mRNA 0.49 6 24220237 24223598

Neighbor

gene id symbol gene type direction distance location
rab6bb rab6b,LOC104929189,LOC105028793,LOC104957876,LOC103360106,LOC100708038,LOC101156359,LOC106534664 coding upstream 3782 24209550 ~ 24216455 (+)
espnlb NA coding upstream 10785 24200243 ~ 24209452 (+)
kif1ab NA coding upstream 22586 24171045 ~ 24197651 (+)
bokb LOC103360102,LOC100707238 coding upstream 59898 24152160 ~ 24160339 (+)
cdc20 cdc20,LOC102779045 coding upstream 78140 24138155 ~ 24142097 (+)
amotl2b NA coding downstream 17108 24240706 ~ 24247620 (+)
LOC120568200 NA coding downstream 29790 24253388 ~ 24257335 (+)
LOC120568201 NA coding downstream 35865 24259463 ~ 24267286 (+)
LOC120568202 NA coding downstream 46086 24269684 ~ 24278078 (+)
tnr tnr coding downstream 150691 24374289 ~ 24545760 (+)
G117488 NA non-coding upstream 50284 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 50682 24164854 ~ 24169555 (+)
G117476 NA non-coding upstream 69466 24150458 ~ 24150771 (+)
G117406 NA non-coding upstream 175753 24043969 ~ 24044484 (+)
G117405 NA non-coding upstream 176696 24036655 ~ 24043541 (+)
G117523 NA non-coding downstream 33956 24257554 ~ 24258831 (+)
LOC120568139 NA non-coding downstream 114095 24337693 ~ 24339256 (+)
G117547 NA non-coding downstream 332821 24556419 ~ 24556657 (+)
G117632 NA non-coding downstream 614358 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 894633 25118231 ~ 25118502 (+)
LOC120569114 NA other upstream 165533 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 196578 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 305739 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 311836 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 365080 23850879 ~ 23855157 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 345930 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 444281 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 639398 24862996 ~ 24870087 (+)
G117664 NA other downstream 726970 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 763901 24987499 ~ 25044057 (+)

Expression


Co-expression Network