LOC120567597


Basic Information

Item Value
gene id LOC120567597
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4872751 ~ 4886268 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640594.1
GCGCGGGGCCGCGGCACTGCTGCGCCGGCACGCTGTGGTTAAAGTGGGCCGCTGCCATGCACTCTGCCGTGgctttgtcacacacacactgcagcttATCGCAGACGGAGACGCCGTGGCCTGGGGGACGACACGGGACACGTCCTgcctcagtcagtcagtcagtgttaGTCCGGGTTGTTTCACAACAAAAGcttCTGTTAGGACTGCCCTGTTTCCCGGCGCTGTAACCTCTGGCTGTAGCAGACAACAACAACGTGCCGTACTCACATCGAGGTTTCCCGTTGTCGCAGGAGACGTGAGCGTTGAGCGTCCTGTCCGAGCGGCAGCCCATGGAGCCGATCTGCTTCAGGCAGCACTGATGGAAGAAGCAACACCtgacgaagaggaggaagaatgtTCAACGTTGTTTTAGCTGGTCCTGAGGCTGCCCCCCGCCCTCCTGTCCGCAGTAGCAGCCGTACATCTCGTACTCATGCGGGCACCGTCCCGTCACGCAGTGCAGCATCTCCCCCAGGGCCGCCATCTCCCGCCTGGCTCGCCC
>XR_005640595.1
CCCGTTGTCGCAGGAGACGTGAGCGTTGAGCGTCCTGTCCGAGCGGCAGCCCATGGAGCCGATCTGCTTCAGGCAGCACTGATGGAAGAAGCAACACCtgacgaagaggaggaagaatgtTCAACGTTGTTTTAGCTGGTCCTGAGGCTGCCCCCCGCCCTCCTGTCCGCAGTAGCAGCCGTACATCTCGTACTCATGCGGGCACCGTCCCGTCACGCAGTGCAGCATCTCCCCCAGGGCCGCCATCTCCCGCCTGGCTCGCCCGTCGCTGCCGAACACGGTGAAGGAGCGGCTGCATTCTGGGGAGACCGTAGGAGGAAACCCAGATTCTGGTCACCGCTGCACCATTGGGAGCATCCTCACCAACTGCATCAGTGTAGTACGGCATCTTCTGTCTCGGACCAAAAGCACTGCAGAGGTCACCTCTCACCCCGGCCACAGTTTTGCACTTGTCCCCTCCGGGAGACGCTACAGGACTCTCGGTCCCAGGACCAGCAGGCTCAggaagagtcatagtatagcgtgTCGTATATGCAAAGTGCCTCCAgtgaataaatttttttttttacactggtgCCATGTTGTGGAACAGCCTTCCACTACACAGCAAGTCTTTCAATATGAGTGGGTCAGGTTAGGACCTAACTATGGAACAGATGTATAATGATATTTGCAATGACATTGTTATTTTAGCTGTCTTGATTTGGGAGATGTGGTGATGTGTTTATGGATTTCAGGATTTAATTAGTTTGTGTGAGAAATGTCTTgtgcttttttgtgttttcatctTGGGACTATGCTGGAAATAAGTGGTTTCACTTGAACATGTTATCTTTTGGATTTTTGTTTCTGTTCCTGATAGTCCTTGAATAAAATCACTCCATCACTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640594.1 False 544 lncRNA 0.62 3 4881968 4886268
XR_005640595.1 True 892 lncRNA 0.50 3 4872751 4883230

Neighbor

gene id symbol gene type direction distance location
si:dkey-7l6.3 NA coding downstream 345570 4519361 ~ 4527181 (-)
LOC120567837 NA coding downstream 362137 4505722 ~ 4510614 (-)
LOC120567835 LOC106949703,LOC103156008,LOC107087008 coding downstream 372962 4487328 ~ 4499789 (-)
slc39a6 slc39a6 coding downstream 704095 4145863 ~ 4168656 (-)
si:ch73-170d6.2 NA coding downstream 751400 4110746 ~ 4121351 (-)
efr3a efr3a coding upstream 8993 4895261 ~ 5063854 (-)
LOC120568537 NA coding upstream 221773 5108041 ~ 5148701 (-)
basp1 NA coding upstream 537723 5423991 ~ 5486661 (-)
march11 march11 coding upstream 797948 5684216 ~ 5699240 (-)
znf622 znf622 coding upstream 819336 5705604 ~ 5718217 (-)
G112162 NA non-coding downstream 67792 4804638 ~ 4804959 (-)
G112142 NA non-coding downstream 76354 4792332 ~ 4796397 (-)
G112122 NA non-coding downstream 207289 4633890 ~ 4665462 (-)
G112121 NA non-coding downstream 242918 4615038 ~ 4629833 (-)
G112095 NA non-coding downstream 263758 4501094 ~ 4608993 (-)
G112176 NA non-coding upstream 28556 4914824 ~ 4915244 (-)
G112177 NA non-coding upstream 37923 4924191 ~ 4980099 (-)
G112180 NA non-coding upstream 122330 5008598 ~ 5008996 (-)
G112183 NA non-coding upstream 181706 5067974 ~ 5068299 (-)
G112184 NA non-coding upstream 190392 5076660 ~ 5077815 (-)
G112046 NA other downstream 588668 4267538 ~ 4284083 (-)
G112043 NA other downstream 634081 4238102 ~ 4238670 (-)
G111942 NA other downstream 835788 3504498 ~ 4036963 (-)
G112233 NA other upstream 777736 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 837465 5723733 ~ 5746081 (-)
G112328 NA other upstream 906895 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 1286013 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 1809342 6695610 ~ 6736512 (-)

Expression


Co-expression Network