LOC120567666


Basic Information

Item Value
gene id LOC120567666
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35655949 ~ 35659245 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640604.1
AGCAGCCTAATATGTCAATCATCGTCTTTCTGTACTTTTGTTGGAAGGTCATGACCTATCAGCCAATGTAATTACAATCCCAGGTAGAGGGGCGGGGCTTAGCTGTAACCTGCAGAgatccagtcagagagacagaaacgctAAGTGAACGGACTTTGTGAGGTTTAGTAGGTTGTAGAAGGACATTGTTATCCATTACTGAGGCTGACAACCAGTTATGCTGTGTTTTGGCATATTGAAATCGACAAGAGAGACGGacatttgtgactgtaaaagagAGAGGATCGGGGAAGCTCCTTTGGACCACACAGAGAGCGATCTTCCATCCTGCTGGTGTGATGTAGACTGCCGCTGCTGTTTTCTGTTCTGCTGATCTTCCTGCTGTGGTTTACCCGGTGCTCTGCCTGCTGCCATCGCCAAGTTCGCCTTTATATCCCCTTGACTGGGATTCTGACTCCCCTCATCCGCTCCATCTACAACTTCCTGTAAGGGAGATCACATTCTCCGAAACAGTGCTGATCCAGTTCAACTTTTCCCGAGGAGGCTGCGGggtcatccattgttttgaaagGTGTCACTTGACTGTCAGCTCTCCATCGCAGCCCTGCATGGCAGTCAAGAAAAGAACCTCCTGAACCATTCCTGCTTAACTCACCTCCACTGGACCTTGCacatttttttccatctcaACATCAACATAGTGAACgatttatatataaattgcCCAGCCATACGTCAGCCCAAACTTACTTTTCCtgacacatttaacattaactTGTACATAATACATCCCCATACACTGGAGTATCTCATGAGTACAGATGCCCATCAATACGCTGTTGCAGGAGAGGTAAATGACACCAAGATATGGCagttgaagaaaaacaaatgtagagTATGTGATAACGGGACATGCAAGTCATCAATTATCAACAGTGTTATTTTTGTGGTGGTTAAGTCTAGATTGATCATGCTAGTAACGTTAACTAGCAAGTTGTTCGTTAAGGGCTGACGGCTGGTTAACGTTACGGACAAAAACTATTTGTTCCTCGTATTCTCTTGTGTGTATCACGTATccgtctcctctagctgttgtGGTTGATATGACGTAGGTCCCCTAGCTTTGATCAGACACAAAAATGGTGACAGCAAAGCACTGTGATGTCACGTGGtcctttaaatataattataaatataaaaatataaatatataccagAAACTATGCACAAAGGACTACTTGCACCCTAGTGCTGCTGAATTTTTGatgttatttaataaatgtcatgttttatatctgtca

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640604.1 True 1301 lncRNA 0.43 3 35655949 35659245

Neighbor

gene id symbol gene type direction distance location
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding upstream 212136 35431679 ~ 35443813 (+)
LOC120567912 NA coding upstream 393047 35261558 ~ 35262902 (+)
LOC120569116 LOC107667722 coding upstream 487233 35165658 ~ 35168716 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 831128 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 879800 34776078 ~ 34776149 (+)
pold3 pold3,LOC107703443 coding downstream 789792 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 906516 36565761 ~ 36583870 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 929409 36588654 ~ 36620596 (+)
LOC120568504 LOC103361716 coding downstream 964832 36624077 ~ 36710812 (+)
LOC120568506 NA coding downstream 1077903 36737148 ~ 36747668 (+)
G120526 NA non-coding upstream 7210 35648460 ~ 35648739 (+)
LOC120568837 NA non-coding upstream 95039 35559341 ~ 35560910 (+)
G120498 NA non-coding upstream 316945 35338739 ~ 35339004 (+)
G120497 NA non-coding upstream 335728 35319921 ~ 35320221 (+)
G120483 NA non-coding upstream 450240 35205112 ~ 35205709 (+)
G120549 NA non-coding downstream 5924 35665169 ~ 35665393 (+)
G120552 NA non-coding downstream 19347 35678592 ~ 35678966 (+)
G120568 NA non-coding downstream 100448 35759693 ~ 35760228 (+)
G120575 NA non-coding downstream 116715 35775960 ~ 35776223 (+)
G120582 NA non-coding downstream 136937 35796182 ~ 35827870 (+)
LOC120568940 NA other upstream 13916 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 964329 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 1048193 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 1198338 34453722 ~ 34457611 (+)
rps28 NA other upstream 1251948 34400748 ~ 34404001 (+)
G120716 NA other downstream 745995 36405240 ~ 36405773 (+)
G120717 NA other downstream 746876 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 1220673 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 1643649 37302894 ~ 37306014 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 2330320 37989565 ~ 38019068 (+)

Expression


Co-expression Network