LOC120567841


Basic Information

Item Value
gene id LOC120567841
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31660615 ~ 31663824 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640619.1
TCTTGTCTTGGGAGTcgaactgaatcattacactGGCTGAGCAATGCCAGCCAGGGGTATCCAGATACATTGCGCAACAAGGAACAATGGCTGCCAGGTCGACCAGAGAGAcccataaatggacgcCGGAGGAAACCCAGCAGCTGATCCACTTTCTGGCTGAAAACGAGCAATATCAGCAAGTCCAAGAATGATGTACCAGTACAGCCCAACTTGAATATATTCCCAACCATTTTGATGGGGGACAGAAGACGGAGCTTCAGGCCAAACTGGTCTAATCTTCATCCATGGCTCGAGTATTCTGTCATGATGGACTCTACATATTGCTATGCAAGTAgacgtttttaattttttattgccCTACCTCTC

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640619.1 True 369 lncRNA 0.47 3 31660615 31663824

Neighbor

gene id symbol gene type direction distance location
LOC120568926 NA coding downstream 458423 31200541 ~ 31202192 (-)
LOC120568925 LOC103362158,LOC101062358,LOC101473907,LOC100706964 coding downstream 504890 31040284 ~ 31155725 (-)
LOC120567647 LOC103362157 coding downstream 934535 30717405 ~ 30726080 (-)
LOC120568640 sdr16c5 coding downstream 1135752 30482588 ~ 30524863 (-)
LOC120568974 LOC101172692,LOC101069094,LOC103362177,LOC106599276 coding downstream 1221963 30319952 ~ 30438652 (-)
LOC120568656 NA coding upstream 18376 31682200 ~ 31692546 (-)
LOC120568655 LOC107092454 coding upstream 32979 31696803 ~ 31710791 (-)
LOC120568044 LOC103370525 coding upstream 50463 31714287 ~ 31799338 (-)
LOC120569109 LOC104940918,LOC103370533 coding upstream 138680 31802504 ~ 31821424 (-)
kcnj9 LOC101477758 coding upstream 174558 31838382 ~ 31860078 (-)
G119284 NA non-coding downstream 46291 31614016 ~ 31614324 (-)
G119260 NA non-coding downstream 205218 31455053 ~ 31455397 (-)
G119259 NA non-coding downstream 205657 31454479 ~ 31454958 (-)
G119249 NA non-coding downstream 243626 31416739 ~ 31416989 (-)
G119246 NA non-coding downstream 251438 31408921 ~ 31409177 (-)
G119347 NA non-coding upstream 185614 31849438 ~ 31915814 (-)
G119357 NA non-coding upstream 252830 31916654 ~ 31917970 (-)
G119358 NA non-coding upstream 254215 31918039 ~ 31919127 (-)
G119368 lig1 non-coding upstream 285635 31949459 ~ 31966226 (-)
G119394 LOC104960271,LOC108428278,LOC103396779,LOC106525269,LOC103358974,LOC102300463 non-coding upstream 441520 32105344 ~ 32110517 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 85422 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 203458 31455599 ~ 31457157 (-)
G119177 NA other downstream 485664 31126430 ~ 31174951 (-)
G119169 NA other downstream 489005 31169922 ~ 31171610 (-)
LOC120568929 NA other downstream 784504 30864246 ~ 30876111 (-)
G119379 NA other upstream 383653 32047477 ~ 32051439 (-)
G119465 cadm3,LOC106600493 other upstream 552678 32216502 ~ 32226360 (-)
LOC120568568 NA other upstream 700637 32364461 ~ 32374518 (-)
fcer1gl NA other upstream 1097145 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 1164540 32828364 ~ 32832509 (-)

Expression


Co-expression Network