LOC120567885


Basic Information

Item Value
gene id LOC120567885
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1524674 ~ 1526105 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640627.1
AATGGAAAGCTAGAGACCACCAAGATGGTTACAGTCCGCTTCTCAGAGTTTGAGGCTTGTGTGGCACCAATCACCAGTAAGGTGAAAGAGGCCCTTGGACAGCAGGAGtcatttattttgacagataGTCAGGGCAACGAAATAGTTGACTCTGATGGAACTAGGGGATCAGCATACTGGAAGCAAAATTCCAGGAAAGTATTTGCAGTACCTGAACCACAGATGGAACTGCTACAAGTCAATAAAAGGAAGAGGTTGAGtCGAAGAGAAGATACTGGCCTTCAAGAGGTTATGGCAGATATTGAAGAAGTTGTTGAAGCAGCCCAGGGACTAAAAGAAGTGTCGAAGATGATTAAGGATTTGAGTGGATTTGCACATTCCACAGTGACAACAACCCTGTCTCTTTAAGAGGCTGAAGTAGCTTCCTTAAGAGTTGTTTTTGCCTGTCTTGTCTGCAAAGGTCCTGTAGACAAGCCAATGTTTTCAACATGCTGCAGAACCCTAATCGGGTGTAAGGCATGTGTTGCGGAGTGGAACAGCAGCCAGAGTTACTGCCCGAAGTGTCGCGCTGTGGATTTGGAGAACAGCGTTCATGAAGTGGCTGGACTCTCTGAGGAGCTGGCACCACTGGAGAAGTTATTCCTTTAGTATGTTGCTATGGTGGCAACAGATGTTCATACAGTTCTTCAGAGCCTTGTTTTTATAGAGGAATAATGTCTAATGTTAACAGTATTATTGTCACATGTAATTGTGGCACTTAAATGAGGTTTACAAGATTTTCTACTTGTTATACAAGATTTTCTACTTGtattttttcacattaaaagaaatatgcaGACCC

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640627.1 True 841 lncRNA 0.43 4 1524674 1526105

Neighbor

gene id symbol gene type direction distance location
LOC120567872 NA coding downstream 89399 1433235 ~ 1435275 (-)
LOC120568025 LOC103365692,LOC101173737 coding downstream 96360 1415156 ~ 1428314 (-)
sft2d3 sft2d3 coding downstream 319133 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 388123 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 471014 1050897 ~ 1053660 (-)
LOC120568497 NA coding upstream 230516 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 992746 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1099733 2625838 ~ 2662765 (-)
lamc2 NA coding upstream 1177254 2703359 ~ 2728546 (-)
LOC120568009 NA coding upstream 1323920 2850025 ~ 2852388 (-)
G111235 NA non-coding downstream 15791 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding downstream 26707 1497762 ~ 1497967 (-)
LOC120568021 NA non-coding downstream 151049 1372855 ~ 1373625 (-)
G111222 NA non-coding downstream 176372 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 202020 1265661 ~ 1322654 (-)
G111245 NA non-coding upstream 23676 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 121068 1647173 ~ 1660408 (-)
G111255 NA non-coding upstream 162187 1688292 ~ 1688562 (-)
G111275 NA non-coding upstream 212128 1738233 ~ 1738676 (-)
G111277 NA non-coding upstream 226856 1752961 ~ 1841038 (-)
G111226 NA other downstream 106715 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 115146 1391808 ~ 1409528 (-)
dhx9 dhx9 other downstream 134136 1353022 ~ 1390538 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 209829 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 410492 1100064 ~ 1114182 (-)
LOC120567890 NA other upstream 217195 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 815357 2341462 ~ 2405093 (-)
G111573 NA other upstream 1047199 2573304 ~ 2578014 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 1372110 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 1678182 3204287 ~ 3229147 (-)

Expression


Co-expression Network