Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120567923 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 13023270 ~ 13039958 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005640635.1 | False | 258 | lncRNA | 0.46 | 3 | 13023270 | 13038939 |
| XR_005640636.1 | True | 355 | lncRNA | 0.41 | 3 | 13023270 | 13039958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| xirp1 | LOC104959684 | coding | downstream | 78552 | 12931398 ~ 12944718 (-) |
| LOC120568154 | NA | coding | downstream | 137823 | 12872858 ~ 12885447 (-) |
| hhatla | hhatl,LOC108238572,LOC103360290,LOC106926958 | coding | downstream | 168951 | 12846128 ~ 12854319 (-) |
| LOC120567650 | LOC100690777,LOC102314387,LOC101469034,LOC102212652 | coding | downstream | 178834 | 12839583 ~ 12844436 (-) |
| LOC120568729 | LOC104956573,LOC103360293 | coding | downstream | 219330 | 12801906 ~ 12803940 (-) |
| cfap410 | cunh21orf2,LOC102788189 | coding | upstream | 72405 | 13112363 ~ 13115289 (-) |
| LOC120568264 | LOC104953400 | coding | upstream | 92974 | 13132932 ~ 13151478 (-) |
| LOC120568263 | LOC104953400 | coding | upstream | 112137 | 13152095 ~ 13158290 (-) |
| tmbim1a | tmbim1 | coding | upstream | 146296 | 13186254 ~ 13195957 (-) |
| casp8 | NA | coding | upstream | 156781 | 13196739 ~ 13207620 (-) |
| G113945 | NA | non-coding | downstream | 230243 | 12789839 ~ 12793027 (-) |
| G113933 | NA | non-coding | downstream | 263997 | 12757651 ~ 12759273 (-) |
| LOC120568043 | NA | non-coding | downstream | 422678 | 12585529 ~ 12600592 (-) |
| G113828 | NA | non-coding | downstream | 666379 | 12356334 ~ 12356891 (-) |
| G113810 | NA | non-coding | downstream | 667189 | 12353843 ~ 12356081 (-) |
| G114131 | NA | non-coding | upstream | 41656 | 13081614 ~ 13084384 (-) |
| G114153 | LOC105007837 | non-coding | upstream | 48728 | 13088686 ~ 13091316 (-) |
| G114130 | col6a2,LOC105007837 | non-coding | upstream | 51689 | 13091647 ~ 13094829 (-) |
| G114159 | NA | non-coding | upstream | 63284 | 13103242 ~ 13104397 (-) |
| G114166 | rpl37a,RPL37A | non-coding | upstream | 74687 | 13114645 ~ 13117450 (-) |
| LOC120568578 | wdr48 | other | downstream | 47942 | 12966466 ~ 12975328 (-) |
| LOC120568934 | LOC104956577 | other | downstream | 254645 | 12760748 ~ 12768625 (-) |
| nedd8l | LOC104931181,LOC104949953,LOC107384241,LOC103360313 | other | downstream | 414701 | 12601180 ~ 12608569 (-) |
| G113805 | NA | other | downstream | 805003 | 12218062 ~ 12218267 (-) |
| LOC120567758 | NA | other | downstream | 2134318 | 10887007 ~ 10888952 (-) |
| G114152 | NA | other | upstream | 44603 | 13084561 ~ 13088563 (-) |
| dis3l2 | dis3l2 | other | upstream | 429573 | 13469531 ~ 13482225 (-) |
| tfr1a | NA | other | upstream | 909913 | 13949871 ~ 13968811 (-) |
| LOC120568687 | NA | other | upstream | 1573655 | 14613613 ~ 14618224 (-) |
| G114680 | NA | other | upstream | 1755960 | 14795918 ~ 14797044 (-) |
